RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 SPC24Q8NBT2 197 aa7.21□□□□□ -1.26
CHD2-221ENST00000635856 NBPF8Q3BBV2 869 aa7.21□□□□□ -1.26
CHD2-221ENST00000635856 HSP90B2PQ58FF3 399 aa7.21□□□□□ -1.26
CHD2-221ENST00000635856 NAIF1Q69YI7 327 aaPredicted RBP7.21□□□□□ -1.26
CHD2-221ENST00000635856 ARMC2Q8NEN0 867 aa7.21□□□□□ -1.26
CHD2-221ENST00000635856 CLUAP1Q96AJ1 413 aa7.21□□□□□ -1.26
CHD2-221ENST00000635856 RBM27Q9P2N5 1060 aaKnown RBP7.21□□□□□ -1.26
CHD2-221ENST00000635856 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.21□□□□□ -1.26
CHD2-221ENST00000635856 RAD54L2Q9Y4B4 1467 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 SLU7O95391 586 aaKnown RBP7.2□□□□□ -1.26
CHD2-221ENST00000635856 ABCD1P33897 745 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 GCKP35557 465 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 SF3A1Q15459 793 aaKnown RBP7.2□□□□□ -1.26
CHD2-221ENST00000635856 NLRP13Q86W25 1043 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 PLEKHH1Q9ULM0 1364 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 MAP3K1Q13233 1512 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 ACTN2P35609 894 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 PTPN14Q15678 1187 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 ACRBPQ8NEB7 543 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 JPH4Q96JJ6 628 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 EIF3CLB5ME19 914 aaKnown RBP7.2□□□□□ -1.26
CHD2-221ENST00000635856 SLFNL1Q499Z3 407 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 MAP9Q49MG5 647 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 EIF3CQ99613 913 aaKnown RBP7.2□□□□□ -1.26
CHD2-221ENST00000635856 POLA1P09884 1462 aaPredicted RBP7.2□□□□□ -1.26
CHD2-221ENST00000635856 NCOA2Q15596 1464 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 KIF7Q2M1P5 1343 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 RAD50Q92878 1312 aa7.2□□□□□ -1.26
CHD2-221ENST00000635856 CCDC189A1A4V9 331 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 ERLIN2O94905 339 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 RLBP1P12271 317 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 CCDC96Q2M329 555 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 TSHZ1Q6ZSZ6 1077 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 UBXN4Q92575 508 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 CRACR2AQ9BSW2 395 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 GNL3LQ9NVN8 582 aaKnown RBP7.19□□□□□ -1.26
CHD2-221ENST00000635856 CHCHD3Q9NX63 227 aaKnown RBP7.19□□□□□ -1.26
CHD2-221ENST00000635856 KIF15Q9NS87 1388 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 A0A087WUV0 522 aaPredicted RBP7.19□□□□□ -1.26
CHD2-221ENST00000635856 EIF5P55010 431 aaKnown RBP7.19□□□□□ -1.26
CHD2-221ENST00000635856 PACS2Q86VP3 889 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 TEX11Q8IYF3 940 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 KIAA1524Q8TCG1 905 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 ZNF777Q9ULD5 760 aaPredicted RBP7.19□□□□□ -1.26
CHD2-221ENST00000635856 GOLGA2Q08379 1002 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 KIF1BPQ96EK5 621 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 NPC1L1Q9UHC9 1359 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 RBM5P52756 815 aaKnown RBP eCLIP7.19□□□□□ -1.26
CHD2-221ENST00000635856 MORC1Q86VD1 984 aa7.19□□□□□ -1.26
CHD2-221ENST00000635856 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.19□□□□□ -1.26
CHD2-221ENST00000635856 GOLGA6L10A6NI86 522 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 GOLGA6L19H0YKK7 550 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 SCP2P22307 547 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 PAX7P23759 505 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 CDR1P51861 262 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 DBN1Q16643 649 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 KMT5BQ4FZB7 885 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 EXOC4Q96A65 974 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 ESF1Q9H501 851 aaKnown RBP7.18□□□□□ -1.26
CHD2-221ENST00000635856 TOP2BQ02880 1626 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 AQRO60306 1485 aaKnown RBP eCLIP7.18□□□□□ -1.265e-8■■■□□ 15
CHD2-221ENST00000635856 ADCY2Q08462 1091 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 ELF2Q15723 593 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 FOXD4L6Q3SYB3 417 aaPredicted RBP7.18□□□□□ -1.26
CHD2-221ENST00000635856 FOXD4L3Q6VB84 417 aaPredicted RBP7.18□□□□□ -1.26
CHD2-221ENST00000635856 ANKRD23Q86SG2 305 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 IGF1RP08069 1367 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 FMN1Q68DA7 1419 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 CLNS1AP54105 237 aaKnown RBP7.18□□□□□ -1.26
CHD2-221ENST00000635856 GNL2Q13823 731 aaKnown RBP7.18□□□□□ -1.26
CHD2-221ENST00000635856 MSL3Q8N5Y2 521 aaKnown RBP7.18□□□□□ -1.26
CHD2-221ENST00000635856 N4BP2L2Q92802 583 aaPredicted RBP7.18□□□□□ -1.26
CHD2-221ENST00000635856 MRFAP1L1Q96HT8 127 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 PDZRN3Q9UPQ7 1066 aa7.18□□□□□ -1.26
CHD2-221ENST00000635856 TPD52L2O43399 206 aaKnown RBP7.17□□□□□ -1.26
CHD2-221ENST00000635856 KINO60870 393 aaKnown RBP7.17□□□□□ -1.26
CHD2-221ENST00000635856 NFXL1Q6ZNB6 911 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 KDM4CQ9H3R0 1056 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 CCDC171Q6TFL3 1326 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 OAS2P29728 719 aaKnown RBP7.17□□□□□ -1.26
CHD2-221ENST00000635856 ELF1P32519 619 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 FBXO38Q6PIJ6 1188 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 CTCFLQ8NI51 663 aaPredicted RBP7.17□□□□□ -1.26
CHD2-221ENST00000635856 ST7Q9NRC1 585 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 PDRG1Q9NUG6 133 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 PRDM2Q13029 1718 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 CCDC144AA2RUR9 1427 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 CUX1P39880 1505 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 ATP8B1O43520 1251 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 ST18O60284 1047 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 TSPY4P0CV99 314 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 TSPY10P0CW01 314 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 MFSD4BQ5TF39 518 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 TADA2BQ86TJ2 420 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 PRPF38AQ8NAV1 312 aaKnown RBP7.17□□□□□ -1.26
CHD2-221ENST00000635856 LMBRD1Q9NUN5 540 aa7.17□□□□□ -1.26
CHD2-221ENST00000635856 KIAA0754O94854 1291 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 MIEF2Q96C03 454 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 KIF2CQ99661 725 aa7.16□□□□□ -1.26
CHD2-221ENST00000635856 RMI1Q9H9A7 625 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms