RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ERVH48-1M5A8F1 160 aa6.19□□□□□ -1.42
SMARCB1-208ENST00000634926 HAP1P54257 671 aaPredicted RBP6.19□□□□□ -1.42
SMARCB1-208ENST00000634926 RAB15P59190 212 aa6.19□□□□□ -1.42
SMARCB1-208ENST00000634926 DHX9Q08211 1270 aaKnown RBP6.19□□□□□ -1.42
SMARCB1-208ENST00000634926 TUSC1Q2TAM9 212 aa6.19□□□□□ -1.42
SMARCB1-208ENST00000634926 C1orf229Q6ZS94 237 aaPredicted RBP6.19□□□□□ -1.42
SMARCB1-208ENST00000634926 GPKOWQ92917 476 aaPredicted RBP eCLIP6.19□□□□□ -1.42
SMARCB1-208ENST00000634926 GTPBP3Q969Y2 492 aaKnown RBP6.19□□□□□ -1.42
SMARCB1-208ENST00000634926 SHISA8B8ZZ34 492 aa6.18□□□□□ -1.42
SMARCB1-208ENST00000634926 ZC3H15Q8WU90 426 aaKnown RBP6.18□□□□□ -1.42
SMARCB1-208ENST00000634926 FKBPLQ9UIM3 349 aa6.18□□□□□ -1.42
SMARCB1-208ENST00000634926 THBS1P07996 1170 aa6.17□□□□□ -1.42
SMARCB1-208ENST00000634926 HELBQ8NG08 1087 aaPredicted RBP6.17□□□□□ -1.42
SMARCB1-208ENST00000634926 ADAM32Q8TC27 787 aa6.17□□□□□ -1.42
SMARCB1-208ENST00000634926 HOXB4P17483 251 aaPredicted RBP6.16□□□□□ -1.42
SMARCB1-208ENST00000634926 RNF144AP50876 292 aaPredicted RBP6.16□□□□□ -1.42
SMARCB1-208ENST00000634926 NR6A1Q15406 480 aa6.16□□□□□ -1.42
SMARCB1-208ENST00000634926 RIPOR1Q6ZS17 1223 aa6.16□□□□□ -1.42
SMARCB1-208ENST00000634926 ZBTB33Q86T24 672 aa6.16□□□□□ -1.42
SMARCB1-208ENST00000634926 EPS8L1Q8TE68 723 aa6.16□□□□□ -1.42
SMARCB1-208ENST00000634926 OIP5O43482 229 aa6.15□□□□□ -1.42
SMARCB1-208ENST00000634926 PODNQ7Z5L7 613 aa6.15□□□□□ -1.42
SMARCB1-208ENST00000634926 CDV3Q9UKY7 258 aaKnown RBP6.15□□□□□ -1.42
SMARCB1-208ENST00000634926 SUV39H2Q9H5I1 410 aa6.14□□□□□ -1.43
SMARCB1-208ENST00000634926 CYLDQ9NQC7 956 aa6.14□□□□□ -1.43
SMARCB1-208ENST00000634926 POLR3EQ9NVU0 708 aa6.14□□□□□ -1.43
SMARCB1-208ENST00000634926 ESPNB1AK53 854 aa6.13□□□□□ -1.43
SMARCB1-208ENST00000634926 POU4F2Q12837 409 aa6.13□□□□□ -1.43
SMARCB1-208ENST00000634926 CLK2P49760 499 aaKnown RBP6.12□□□□□ -1.43
SMARCB1-208ENST00000634926 GAS2L1Q99501 681 aaPredicted RBP6.12□□□□□ -1.43
SMARCB1-208ENST00000634926 KRTAP4-12Q9BQ66 201 aa6.12□□□□□ -1.43
SMARCB1-208ENST00000634926 MX2P20592 715 aa6.11□□□□□ -1.43
SMARCB1-208ENST00000634926 LINC00114Q6XXX2 140 aa6.11□□□□□ -1.43
SMARCB1-208ENST00000634926 GMCL1Q96IK5 515 aa6.11□□□□□ -1.43
SMARCB1-208ENST00000634926 LRRC4BQ9NT99 713 aa6.11□□□□□ -1.43
SMARCB1-208ENST00000634926 DYRK1BQ9Y463 629 aa6.11□□□□□ -1.43
SMARCB1-208ENST00000634926 OXCT2Q9BYC2 517 aaPredicted RBP6.1□□□□□ -1.43
SMARCB1-208ENST00000634926 A0A1W2PRU2 124 aa6.09□□□□□ -1.43
SMARCB1-208ENST00000634926 C1QTNF9BB2RNN3 333 aa6.09□□□□□ -1.43
SMARCB1-208ENST00000634926 MEN1O00255 615 aa6.09□□□□□ -1.43
SMARCB1-208ENST00000634926 PTK2Q05397 1052 aa6.09□□□□□ -1.43
SMARCB1-208ENST00000634926 FOXR1Q6PIV2 292 aa6.09□□□□□ -1.43
SMARCB1-208ENST00000634926 CD163Q86VB7 1156 aa6.09□□□□□ -1.43
SMARCB1-208ENST00000634926 KLRG1Q96E93 195 aa6.09□□□□□ -1.43
SMARCB1-208ENST00000634926 UBAP2LQ14157 1087 aaKnown RBP6.08□□□□□ -1.44
SMARCB1-208ENST00000634926 NBPF20Q3BBV1 942 aa6.08□□□□□ -1.44
SMARCB1-208ENST00000634926 LCE3BQ5TA77 95 aa6.08□□□□□ -1.44
SMARCB1-208ENST00000634926 NBPF10Q6P3W6 841 aaKnown RBP6.08□□□□□ -1.44
SMARCB1-208ENST00000634926 NBPF15Q8N660 670 aa6.08□□□□□ -1.44
SMARCB1-208ENST00000634926 GRIP2Q9C0E4 1043 aa6.08□□□□□ -1.44
SMARCB1-208ENST00000634926 HMX1Q9NP08 348 aaPredicted RBP6.08□□□□□ -1.44
SMARCB1-208ENST00000634926 ZC3H4Q9UPT8 1303 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 C2CD2LO14523 706 aa6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 CHRNA4P43681 627 aa6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 PDE4DQ08499 809 aa6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 GRIN2CQ14957 1233 aa6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 FOXD4L6Q3SYB3 417 aaPredicted RBP6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 FOXD4L3Q6VB84 417 aaPredicted RBP6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 AK7Q96M32 723 aa6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 MKL2Q9ULH7 1088 aa6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 GPSM3Q9Y4H4 160 aa6.07□□□□□ -1.44
SMARCB1-208ENST00000634926 ATP5J2-PTCD1G3V325 749 aa6.06□□□□□ -1.44
SMARCB1-208ENST00000634926 GPC1P35052 558 aa6.06□□□□□ -1.44
SMARCB1-208ENST00000634926 DZIP3Q86Y13 1208 aaKnown RBP6.06□□□□□ -1.44
SMARCB1-208ENST00000634926 PROCA1Q8NCQ7 364 aaPredicted RBP6.06□□□□□ -1.44
SMARCB1-208ENST00000634926 TRERF1Q96PN7 1200 aa6.06□□□□□ -1.44
SMARCB1-208ENST00000634926 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
SMARCB1-208ENST00000634926 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
SMARCB1-208ENST00000634926 NUCKS1Q9H1E3 243 aaKnown RBP6.06□□□□□ -1.44
SMARCB1-208ENST00000634926 H7C1W4 665 aa6.05□□□□□ -1.44
SMARCB1-208ENST00000634926 GIGYF1O75420 1035 aaPredicted RBP6.05□□□□□ -1.44
SMARCB1-208ENST00000634926 EDARADDQ8WWZ3 215 aa6.05□□□□□ -1.44
SMARCB1-208ENST00000634926 RRAGCQ9HB90 399 aa6.05□□□□□ -1.44
SMARCB1-208ENST00000634926 SCTRP47872 440 aa6.04□□□□□ -1.44
SMARCB1-208ENST00000634926 PPP2R2DQ66LE6 453 aa6.04□□□□□ -1.44
SMARCB1-208ENST00000634926 SEMA6BQ9H3T3 888 aa6.04□□□□□ -1.44
SMARCB1-208ENST00000634926 SPATA31C2B4DYI2 1134 aa6.03□□□□□ -1.44
SMARCB1-208ENST00000634926 SLC24A1O60721 1099 aa6.03□□□□□ -1.44
SMARCB1-208ENST00000634926 F11P03951 625 aa6.03□□□□□ -1.44
SMARCB1-208ENST00000634926 MAP2K3P46734 347 aa6.03□□□□□ -1.44
SMARCB1-208ENST00000634926 DOC2BQ14184 412 aa6.03□□□□□ -1.44
SMARCB1-208ENST00000634926 GPAMQ9HCL2 828 aa6.03□□□□□ -1.44
SMARCB1-208ENST00000634926 TIMMDC1Q9NPL8 285 aa6.03□□□□□ -1.44
SMARCB1-208ENST00000634926 SLC27A3Q5K4L6 730 aa6.02□□□□□ -1.45
SMARCB1-208ENST00000634926 CFHR5Q9BXR6 569 aa6.02□□□□□ -1.45
SMARCB1-208ENST00000634926 HCN2Q9UL51 889 aa6.02□□□□□ -1.45
SMARCB1-208ENST00000634926 AP1G2O75843 785 aa6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 ERVK-9P63128 1117 aa6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 CTBSQ01459 385 aa6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 CLN3Q13286 438 aa6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 ZMYM1Q5SVZ6 1142 aa6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 ALYREFQ86V81 257 aaKnown RBP6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 VSIG10Q8N0Z9 540 aa6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 NSFL1CQ9UNZ2 370 aaKnown RBP6.01□□□□□ -1.45
SMARCB1-208ENST00000634926 WASLO00401 505 aaPredicted RBP6□□□□□ -1.45
SMARCB1-208ENST00000634926 PHKA2P46019 1235 aa6□□□□□ -1.45
SMARCB1-208ENST00000634926 SEPT12Q8IYM1 358 aa6□□□□□ -1.45
SMARCB1-208ENST00000634926 BTBD6Q96KE9 485 aa6□□□□□ -1.45
SMARCB1-208ENST00000634926 ARHGEF10LQ9HCE6 1279 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms