RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 TNS1Q9HBL0 1735 aaKnown RBP19.9■□□□□ 0.78
CDC42BPB-209ENST00000634889 SBF2Q86WG5 1849 aa19.9■□□□□ 0.78
CDC42BPB-209ENST00000634889 RALBP1Q15311 655 aa19.89■□□□□ 0.77
CDC42BPB-209ENST00000634889 ZCRB1Q8TBF4 217 aaKnown RBP19.89■□□□□ 0.77
CDC42BPB-209ENST00000634889 KDRP35968 1356 aa19.88■□□□□ 0.77
CDC42BPB-209ENST00000634889 DIAPH1O60610 1272 aaKnown RBP19.88■□□□□ 0.77
CDC42BPB-209ENST00000634889 SF3B2Q13435 895 aaKnown RBP19.88■□□□□ 0.77
CDC42BPB-209ENST00000634889 CFAP53Q96M91 514 aa19.88■□□□□ 0.77
CDC42BPB-209ENST00000634889 PCDH11XQ9BZA7 1347 aa19.86■□□□□ 0.77
CDC42BPB-209ENST00000634889 PCDH11YQ9BZA8 1340 aa19.86■□□□□ 0.77
CDC42BPB-209ENST00000634889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.86■□□□□ 0.77
CDC42BPB-209ENST00000634889 TRIM37O94972 964 aa19.85■□□□□ 0.77
CDC42BPB-209ENST00000634889 NHSQ6T4R5 1651 aa19.84■□□□□ 0.77
CDC42BPB-209ENST00000634889 DDX54Q8TDD1 881 aaKnown RBP19.84■□□□□ 0.77
CDC42BPB-209ENST00000634889 SPG7Q9UQ90 795 aa19.84■□□□□ 0.77
CDC42BPB-209ENST00000634889 SULT6B1Q6IMI4 303 aa19.83■□□□□ 0.77
CDC42BPB-209ENST00000634889 BAG6P46379 1132 aa19.81■□□□□ 0.76
CDC42BPB-209ENST00000634889 AEBP1Q8IUX7 1158 aa19.81■□□□□ 0.76
CDC42BPB-209ENST00000634889 BCL11BQ9C0K0 894 aaPredicted RBP19.81■□□□□ 0.76
CDC42BPB-209ENST00000634889 DOT1LQ8TEK3 1739 aa19.81■□□□□ 0.76
CDC42BPB-209ENST00000634889 RGPD3A6NKT7 1758 aaPredicted RBP19.8■□□□□ 0.76
CDC42BPB-209ENST00000634889 RGPD4Q7Z3J3 1758 aa19.8■□□□□ 0.76
CDC42BPB-209ENST00000634889 MYBBP1AQ9BQG0 1328 aaKnown RBP19.8■□□□□ 0.76
CDC42BPB-209ENST00000634889 NUDCQ9Y266 331 aa19.8■□□□□ 0.76
CDC42BPB-209ENST00000634889 CYP27B1O15528 508 aa19.79■□□□□ 0.76
CDC42BPB-209ENST00000634889 AMOTQ4VCS5 1084 aa19.79■□□□□ 0.76
CDC42BPB-209ENST00000634889 U2SURPO15042 1029 aaKnown RBP19.78■□□□□ 0.76
CDC42BPB-209ENST00000634889 APBA3O96018 575 aa19.78■□□□□ 0.76
CDC42BPB-209ENST00000634889 PLEKHO1Q53GL0 409 aaPredicted RBP19.78■□□□□ 0.76
CDC42BPB-209ENST00000634889 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
CDC42BPB-209ENST00000634889 DEFB132Q7Z7B7 95 aa19.77■□□□□ 0.76
CDC42BPB-209ENST00000634889 HMOX1P09601 288 aa19.76■□□□□ 0.75
CDC42BPB-209ENST00000634889 NKX1-1Q15270 411 aaPredicted RBP19.76■□□□□ 0.75
CDC42BPB-209ENST00000634889 IFNL2Q8IZJ0 200 aa19.76■□□□□ 0.75
CDC42BPB-209ENST00000634889 BTAF1O14981 1849 aa19.75■□□□□ 0.75
CDC42BPB-209ENST00000634889 ACSBG1Q96GR2 724 aa19.75■□□□□ 0.75
CDC42BPB-209ENST00000634889 TOGARAM1Q9Y4F4 1720 aa19.74■□□□□ 0.75
CDC42BPB-209ENST00000634889 PLSCR1O15162 318 aa19.74■□□□□ 0.75
CDC42BPB-209ENST00000634889 KCNQ2O43526 872 aa19.74■□□□□ 0.75
CDC42BPB-209ENST00000634889 PHKG2P15735 406 aa19.74■□□□□ 0.75
CDC42BPB-209ENST00000634889 RREB1Q92766 1687 aa19.74■□□□□ 0.75
CDC42BPB-209ENST00000634889 EN1Q05925 392 aaPredicted RBP19.73■□□□□ 0.75
CDC42BPB-209ENST00000634889 PTF1AQ7RTS3 328 aa19.73■□□□□ 0.75
CDC42BPB-209ENST00000634889 HSP90AB1P08238 724 aaKnown RBP19.72■□□□□ 0.75
CDC42BPB-209ENST00000634889 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
CDC42BPB-209ENST00000634889 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.75
CDC42BPB-209ENST00000634889 ZNF530Q6P9A1 599 aaPredicted RBP19.72■□□□□ 0.75
CDC42BPB-209ENST00000634889 CAMKK2Q96RR4 588 aa19.72■□□□□ 0.75
CDC42BPB-209ENST00000634889 PRIM1P49642 420 aaKnown RBP19.71■□□□□ 0.75
CDC42BPB-209ENST00000634889 C1orf141Q5JVX7 400 aa19.71■□□□□ 0.75
CDC42BPB-209ENST00000634889 ITGB4P16144 1822 aa19.71■□□□□ 0.75
CDC42BPB-209ENST00000634889 FCHSD2O94868 740 aa19.7■□□□□ 0.74
CDC42BPB-209ENST00000634889 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
CDC42BPB-209ENST00000634889 DCAF5Q96JK2 942 aa19.7■□□□□ 0.74
CDC42BPB-209ENST00000634889 RSPH6AQ9H0K4 717 aa19.7■□□□□ 0.74
CDC42BPB-209ENST00000634889 KAT6BQ8WYB5 2073 aa19.69■□□□□ 0.74
CDC42BPB-209ENST00000634889 EZH2Q15910 746 aaKnown RBP19.69■□□□□ 0.74
CDC42BPB-209ENST00000634889 NUP188Q5SRE5 1749 aa19.68■□□□□ 0.74
CDC42BPB-209ENST00000634889 AKAP4Q5JQC9 854 aa19.68■□□□□ 0.74
CDC42BPB-209ENST00000634889 ANP32CO43423 234 aa19.67■□□□□ 0.74
CDC42BPB-209ENST00000634889 PRKAR2BP31323 418 aa19.67■□□□□ 0.74
CDC42BPB-209ENST00000634889 SCN11AQ9UI33 1791 aa19.67■□□□□ 0.74
CDC42BPB-209ENST00000634889 KDM6AO15550 1401 aaPredicted RBP19.67■□□□□ 0.74
CDC42BPB-209ENST00000634889 ADAMTS7Q9UKP4 1686 aa19.66■□□□□ 0.74
CDC42BPB-209ENST00000634889 MTHFSDQ2M296 383 aaKnown RBP19.66■□□□□ 0.74
CDC42BPB-209ENST00000634889 GAS2L2Q8NHY3 880 aa19.66■□□□□ 0.74
CDC42BPB-209ENST00000634889 ERVV-2B6SEH9 535 aa19.65■□□□□ 0.74
CDC42BPB-209ENST00000634889 LY75O60449 1722 aa19.65■□□□□ 0.74
CDC42BPB-209ENST00000634889 MPRIPQ6WCQ1 1025 aa19.64■□□□□ 0.73
CDC42BPB-209ENST00000634889 PNNQ9H307 717 aaKnown RBP19.64■□□□□ 0.73
CDC42BPB-209ENST00000634889 TMOD3Q9NYL9 352 aa19.64■□□□□ 0.73
CDC42BPB-209ENST00000634889 VIRMAQ69YN4 1812 aaKnown RBP19.64■□□□□ 0.73
CDC42BPB-209ENST00000634889 MRC1P22897 1456 aa19.62■□□□□ 0.73
CDC42BPB-209ENST00000634889 MAP3K5Q99683 1374 aa19.62■□□□□ 0.73
CDC42BPB-209ENST00000634889 NEFMP07197 916 aa19.62■□□□□ 0.73
CDC42BPB-209ENST00000634889 TXNRD1Q16881 649 aa19.62■□□□□ 0.73
CDC42BPB-209ENST00000634889 PIGBQ92521 554 aa19.62■□□□□ 0.73
CDC42BPB-209ENST00000634889 PHACTR3Q96KR7 559 aa19.62■□□□□ 0.73
CDC42BPB-209ENST00000634889 PROM2Q8N271 834 aa19.61■□□□□ 0.73
CDC42BPB-209ENST00000634889 GNAT3A8MTJ3 354 aa19.6■□□□□ 0.73
CDC42BPB-209ENST00000634889 WDR43Q15061 677 aaKnown RBP eCLIP19.6■□□□□ 0.73
CDC42BPB-209ENST00000634889 SLC27A3Q5K4L6 730 aa19.6■□□□□ 0.73
CDC42BPB-209ENST00000634889 SMARCC1Q92922 1105 aaPredicted RBP19.6■□□□□ 0.73
CDC42BPB-209ENST00000634889 PLEKHF1Q96S99 279 aa19.6■□□□□ 0.73
CDC42BPB-209ENST00000634889 PAPPAQ13219 1627 aa19.59■□□□□ 0.73
CDC42BPB-209ENST00000634889 CABP4P57796 275 aa19.59■□□□□ 0.73
CDC42BPB-209ENST00000634889 PALLDQ8WX93 1383 aa19.58■□□□□ 0.73
CDC42BPB-209ENST00000634889 RNMTO43148 476 aaKnown RBP19.58■□□□□ 0.72
CDC42BPB-209ENST00000634889 MAPK8IP3Q9UPT6 1336 aa19.57■□□□□ 0.72
CDC42BPB-209ENST00000634889 NBPF14Q5TI25 921 aa19.57■□□□□ 0.72
CDC42BPB-209ENST00000634889 HMGB2P26583 209 aaKnown RBP19.56■□□□□ 0.72
CDC42BPB-209ENST00000634889 SLC52A2Q9HAB3 445 aa19.56■□□□□ 0.72
CDC42BPB-209ENST00000634889 LGR6Q9HBX8 967 aa19.56■□□□□ 0.72
CDC42BPB-209ENST00000634889 ZNF831Q5JPB2 1677 aa19.56■□□□□ 0.72
CDC42BPB-209ENST00000634889 NFATC2IPQ8NCF5 419 aa19.55■□□□□ 0.72
CDC42BPB-209ENST00000634889 CEMIPQ8WUJ3 1361 aa19.55■□□□□ 0.72
CDC42BPB-209ENST00000634889 HTATSF1O43719 755 aaKnown RBP19.54■□□□□ 0.72
CDC42BPB-209ENST00000634889 ATG3Q9NT62 314 aa19.54■□□□□ 0.72
CDC42BPB-209ENST00000634889 LRRC4BQ9NT99 713 aa19.54■□□□□ 0.72
CDC42BPB-209ENST00000634889 CCNL1Q9UK58 526 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms