RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ADD1P35611 737 aaKnown RBP6.98□□□□□ -1.29
SRP54-214ENST00000630962 NLRP3Q96P20 1036 aa6.98□□□□□ -1.29
SRP54-214ENST00000630962 POLMQ9NP87 494 aaPredicted RBP6.98□□□□□ -1.29
SRP54-214ENST00000630962 RNF144AP50876 292 aaPredicted RBP6.97□□□□□ -1.29
SRP54-214ENST00000630962 PLPP7Q8NBV4 271 aa6.97□□□□□ -1.29
SRP54-214ENST00000630962 ZNF775Q96BV0 537 aaPredicted RBP6.97□□□□□ -1.29
SRP54-214ENST00000630962 AGBL1Q96MI9 1066 aa6.97□□□□□ -1.29
SRP54-214ENST00000630962 TERTO14746 1132 aaKnown RBP6.96□□□□□ -1.3
SRP54-214ENST00000630962 GTF2E1P29083 439 aaPredicted RBP6.96□□□□□ -1.3
SRP54-214ENST00000630962 CLN3Q13286 438 aa6.96□□□□□ -1.3
SRP54-214ENST00000630962 EML3Q32P44 896 aa6.96□□□□□ -1.3
SRP54-214ENST00000630962 CCDC85AQ96PX6 553 aaPredicted RBP6.96□□□□□ -1.3
SRP54-214ENST00000630962 ZNF395Q9H8N7 513 aaPredicted RBP6.96□□□□□ -1.3
SRP54-214ENST00000630962 HDGFL1Q5TGJ6 251 aa6.95□□□□□ -1.3
SRP54-214ENST00000630962 TREML4Q6UXN2 200 aa6.95□□□□□ -1.3
SRP54-214ENST00000630962 ERICH6Q7L0X2 663 aa6.95□□□□□ -1.3
SRP54-214ENST00000630962 FNBP4Q8N3X1 1017 aaPredicted RBP6.95□□□□□ -1.3
SRP54-214ENST00000630962 CLUAP1Q96AJ1 413 aa6.95□□□□□ -1.3
SRP54-214ENST00000630962 INSM2Q96T92 566 aaPredicted RBP6.95□□□□□ -1.3
SRP54-214ENST00000630962 OSBPL3Q9H4L5 887 aa6.95□□□□□ -1.3
SRP54-214ENST00000630962 A0A1W2PRU2 124 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 WFS1O76024 890 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 SKIP12755 728 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 OXLD1Q5BKU9 147 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 WDR44Q5JSH3 913 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 LYSMD3Q7Z3D4 306 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 TRIM50Q86XT4 487 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 IRF7Q92985 503 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 DNMT3LQ9UJW3 386 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 NOD1Q9Y239 953 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 GTF3C3Q9Y5Q9 886 aa6.94□□□□□ -1.3
SRP54-214ENST00000630962 MEN1O00255 615 aa6.93□□□□□ -1.3
SRP54-214ENST00000630962 CTSOP43234 321 aaPredicted RBP6.93□□□□□ -1.3
SRP54-214ENST00000630962 SCTRP47872 440 aa6.93□□□□□ -1.3
SRP54-214ENST00000630962 SLC27A3Q5K4L6 730 aa6.93□□□□□ -1.3
SRP54-214ENST00000630962 KDF1Q8NAX2 398 aaPredicted RBP6.93□□□□□ -1.3
SRP54-214ENST00000630962 RNF217Q8TC41 542 aa6.93□□□□□ -1.3
SRP54-214ENST00000630962 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
SRP54-214ENST00000630962 PLEKHM2Q8IWE5 1019 aa6.92□□□□□ -1.3
SRP54-214ENST00000630962 CDCA7Q9BWT1 371 aaPredicted RBP6.92□□□□□ -1.3
SRP54-214ENST00000630962 FIGNL2A6NMB9 653 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 H3BM21 787 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 WASLO00401 505 aaPredicted RBP6.91□□□□□ -1.3
SRP54-214ENST00000630962 ATP9BO43861 1147 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 ATP1A2P50993 1020 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 GLMNQ92990 594 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 XAGE2Q96GT9 111 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 GMCL1Q96IK5 515 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 CALR3Q96L12 384 aaKnown RBP6.91□□□□□ -1.3
SRP54-214ENST00000630962 ARHGEF10LQ9HCE6 1279 aa6.91□□□□□ -1.3
SRP54-214ENST00000630962 POM121CA8CG34 1229 aa6.9□□□□□ -1.3
SRP54-214ENST00000630962 USP17L5A8MUK1 530 aa6.9□□□□□ -1.3
SRP54-214ENST00000630962 SPATA31C2B4DYI2 1134 aa6.9□□□□□ -1.3
SRP54-214ENST00000630962 BACH1O14867 736 aa6.9□□□□□ -1.3
SRP54-214ENST00000630962 PTSQ03393 145 aa6.9□□□□□ -1.3
SRP54-214ENST00000630962 NFX1Q12986 1120 aaKnown RBP6.9□□□□□ -1.3
SRP54-214ENST00000630962 FOXD4L5Q5VV16 416 aaPredicted RBP6.9□□□□□ -1.3
SRP54-214ENST00000630962 GRIP2Q9C0E4 1043 aa6.9□□□□□ -1.3
SRP54-214ENST00000630962 GNASQ5JWF2 1037 aa6.89□□□□□ -1.31
SRP54-214ENST00000630962 ZSCAN10Q96SZ4 725 aaPredicted RBP6.89□□□□□ -1.31
SRP54-214ENST00000630962 RBM19Q9Y4C8 960 aaKnown RBP6.89□□□□□ -1.31
SRP54-214ENST00000630962 SLC35F4A4IF30 521 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 SOBPA7XYQ1 873 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 PPFIA3O75145 1194 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 VSIG8P0DPA2 414 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 CENPCQ03188 943 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 TSGA10IPQ3SY00 556 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
SRP54-214ENST00000630962 TAS1R3Q7RTX0 852 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 NBPF15Q8N660 670 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 CCDC155Q8N6L0 562 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 ZMYND15Q9H091 742 aa6.88□□□□□ -1.31
SRP54-214ENST00000630962 H7C1W4 665 aa6.87□□□□□ -1.31
SRP54-214ENST00000630962 PIK3CDO00329 1044 aa6.87□□□□□ -1.31
SRP54-214ENST00000630962 INHAP05111 366 aa6.87□□□□□ -1.31
SRP54-214ENST00000630962 GDF10P55107 478 aa6.87□□□□□ -1.31
SRP54-214ENST00000630962 NCOA4Q13772 614 aa6.87□□□□□ -1.31
SRP54-214ENST00000630962 PRICKLE2Q7Z3G6 844 aa6.87□□□□□ -1.31
SRP54-214ENST00000630962 ADAMTS19Q8TE59 1207 aa6.87□□□□□ -1.31
SRP54-214ENST00000630962 NANOS1Q8WY41 292 aaKnown RBP6.87□□□□□ -1.31
SRP54-214ENST00000630962 DYRK1BQ9Y463 629 aa6.87□□□□□ -1.31
SRP54-214ENST00000630962 USP17L3A6NCW0 530 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 USP17L4A6NCW7 530 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 WIPF1O43516 503 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 IL2RAP01589 272 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 GTF2IP78347 998 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 INSM1Q01101 510 aaPredicted RBP6.86□□□□□ -1.31
SRP54-214ENST00000630962 PSME1Q06323 249 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 FOXR1Q6PIV2 292 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 USP17L2Q6R6M4 530 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 USP17L1Q7RTZ2 530 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 RAB6BQ9NRW1 208 aa6.86□□□□□ -1.31
SRP54-214ENST00000630962 PALM3A6NDB9 673 aaPredicted RBP6.85□□□□□ -1.31
SRP54-214ENST00000630962 ITGA6P23229 1130 aa6.85□□□□□ -1.31
SRP54-214ENST00000630962 TLR1Q15399 786 aa6.85□□□□□ -1.31
SRP54-214ENST00000630962 NBPF10Q6P3W6 841 aaKnown RBP6.85□□□□□ -1.31
SRP54-214ENST00000630962 TBC1D9Q6ZT07 1266 aa6.85□□□□□ -1.31
SRP54-214ENST00000630962 PPARGC1BQ86YN6 1023 aaKnown RBP6.85□□□□□ -1.31
SRP54-214ENST00000630962 LARGE2Q8N3Y3 721 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms