RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 KCNA4P22459 653 aa12□□□□□ -0.49
CHD2-216ENST00000629104 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
CHD2-216ENST00000629104 MARCH10Q8NA82 808 aaPredicted RBP12□□□□□ -0.49
CHD2-216ENST00000629104 RAPGEF4Q8WZA2 1011 aa12□□□□□ -0.49
CHD2-216ENST00000629104 IGSF1Q8N6C5 1336 aa12□□□□□ -0.49
CHD2-216ENST00000629104 PARD3Q8TEW0 1356 aa12□□□□□ -0.49
CHD2-216ENST00000629104 COL3A1P02461 1466 aaPredicted RBP12□□□□□ -0.49
CHD2-216ENST00000629104 PPP2R1AP30153 589 aa11.99□□□□□ -0.49
CHD2-216ENST00000629104 IL13P35225 146 aa11.99□□□□□ -0.49
CHD2-216ENST00000629104 CCDC125Q86Z20 511 aa11.99□□□□□ -0.49
CHD2-216ENST00000629104 BCL9O00512 1426 aa11.99□□□□□ -0.49
CHD2-216ENST00000629104 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
CHD2-216ENST00000629104 TATP17735 454 aaPredicted RBP11.98□□□□□ -0.49
CHD2-216ENST00000629104 ZCRB1Q8TBF4 217 aaKnown RBP11.97□□□□□ -0.49
CHD2-216ENST00000629104 NHSQ6T4R5 1651 aa11.97□□□□□ -0.49
CHD2-216ENST00000629104 PLEKHG2Q9H7P9 1386 aa11.96□□□□□ -0.49
CHD2-216ENST00000629104 DIAPH1O60610 1272 aaKnown RBP11.96□□□□□ -0.49
CHD2-216ENST00000629104 TRIM37O94972 964 aa11.96□□□□□ -0.49
CHD2-216ENST00000629104 DDX54Q8TDD1 881 aaKnown RBP11.96□□□□□ -0.49
CHD2-216ENST00000629104 DOT1LQ8TEK3 1739 aa11.96□□□□□ -0.49
CHD2-216ENST00000629104 KDRP35968 1356 aa11.95□□□□□ -0.5
CHD2-216ENST00000629104 KAT6BQ8WYB5 2073 aa11.95□□□□□ -0.5
CHD2-216ENST00000629104 SF3B2Q13435 895 aaKnown RBP11.95□□□□□ -0.5
CHD2-216ENST00000629104 RALBP1Q15311 655 aa11.95□□□□□ -0.5
CHD2-216ENST00000629104 CFAP53Q96M91 514 aa11.95□□□□□ -0.5
CHD2-216ENST00000629104 PCDH11XQ9BZA7 1347 aa11.94□□□□□ -0.5
CHD2-216ENST00000629104 PCDH11YQ9BZA8 1340 aa11.94□□□□□ -0.5
CHD2-216ENST00000629104 SULT6B1Q6IMI4 303 aa11.94□□□□□ -0.5
CHD2-216ENST00000629104 AEBP1Q8IUX7 1158 aa11.94□□□□□ -0.5
CHD2-216ENST00000629104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.51e-7■■■□□ 17.5
CHD2-216ENST00000629104 RGPD3A6NKT7 1758 aaPredicted RBP11.93□□□□□ -0.5
CHD2-216ENST00000629104 RGPD4Q7Z3J3 1758 aa11.93□□□□□ -0.5
CHD2-216ENST00000629104 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
CHD2-216ENST00000629104 BTAF1O14981 1849 aa11.93□□□□□ -0.5
CHD2-216ENST00000629104 TOGARAM1Q9Y4F4 1720 aa11.92□□□□□ -0.5
CHD2-216ENST00000629104 CYP27B1O15528 508 aa11.92□□□□□ -0.5
CHD2-216ENST00000629104 BAG6P46379 1132 aa11.92□□□□□ -0.5
CHD2-216ENST00000629104 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
CHD2-216ENST00000629104 BCL11BQ9C0K0 894 aaPredicted RBP11.92□□□□□ -0.5
CHD2-216ENST00000629104 ITGB4P16144 1822 aa11.92□□□□□ -0.5
CHD2-216ENST00000629104 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
CHD2-216ENST00000629104 RREB1Q92766 1687 aa11.91□□□□□ -0.5
CHD2-216ENST00000629104 U2SURPO15042 1029 aaKnown RBP11.91□□□□□ -0.5
CHD2-216ENST00000629104 APBA3O96018 575 aa11.91□□□□□ -0.5
CHD2-216ENST00000629104 HMOX1P09601 288 aa11.91□□□□□ -0.5
CHD2-216ENST00000629104 PTF1AQ7RTS3 328 aa11.91□□□□□ -0.5
CHD2-216ENST00000629104 ACSBG1Q96GR2 724 aa11.91□□□□□ -0.5
CHD2-216ENST00000629104 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
CHD2-216ENST00000629104 KCNQ2O43526 872 aa11.9□□□□□ -0.5
CHD2-216ENST00000629104 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
CHD2-216ENST00000629104 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
CHD2-216ENST00000629104 PLEKHO1Q53GL0 409 aaPredicted RBP11.9□□□□□ -0.5
CHD2-216ENST00000629104 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
CHD2-216ENST00000629104 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
CHD2-216ENST00000629104 PHKG2P15735 406 aa11.89□□□□□ -0.51
CHD2-216ENST00000629104 NKX1-1Q15270 411 aaPredicted RBP11.89□□□□□ -0.51
CHD2-216ENST00000629104 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
CHD2-216ENST00000629104 EZH2Q15910 746 aaKnown RBP11.88□□□□□ -0.51
CHD2-216ENST00000629104 CAMKK2Q96RR4 588 aa11.88□□□□□ -0.51
CHD2-216ENST00000629104 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
CHD2-216ENST00000629104 SCN11AQ9UI33 1791 aa11.87□□□□□ -0.51
CHD2-216ENST00000629104 PLSCR1O15162 318 aa11.87□□□□□ -0.51
CHD2-216ENST00000629104 PRIM1P49642 420 aaKnown RBP11.87□□□□□ -0.51
CHD2-216ENST00000629104 ZNF530Q6P9A1 599 aaPredicted RBP11.87□□□□□ -0.51
CHD2-216ENST00000629104 LY75O60449 1722 aa11.86□□□□□ -0.51
CHD2-216ENST00000629104 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
CHD2-216ENST00000629104 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD2-216ENST00000629104 SYTL4Q96C24 671 aaPredicted RBP11.86□□□□□ -0.51
CHD2-216ENST00000629104 RSPH6AQ9H0K4 717 aa11.86□□□□□ -0.51
CHD2-216ENST00000629104 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
CHD2-216ENST00000629104 PRKAR2BP31323 418 aa11.85□□□□□ -0.51
CHD2-216ENST00000629104 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
CHD2-216ENST00000629104 C1orf141Q5JVX7 400 aa11.85□□□□□ -0.51
CHD2-216ENST00000629104 KDM6AO15550 1401 aaPredicted RBP11.85□□□□□ -0.51
CHD2-216ENST00000629104 ADAMTS7Q9UKP4 1686 aa11.84□□□□□ -0.51
CHD2-216ENST00000629104 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
CHD2-216ENST00000629104 FCHSD2O94868 740 aa11.84□□□□□ -0.51
CHD2-216ENST00000629104 AKAP4Q5JQC9 854 aa11.84□□□□□ -0.51
CHD2-216ENST00000629104 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
CHD2-216ENST00000629104 DCAF5Q96JK2 942 aa11.83□□□□□ -0.52
CHD2-216ENST00000629104 ANP32CO43423 234 aa11.82□□□□□ -0.52
CHD2-216ENST00000629104 PROM2Q8N271 834 aa11.82□□□□□ -0.52
CHD2-216ENST00000629104 GAS2L2Q8NHY3 880 aa11.82□□□□□ -0.52
CHD2-216ENST00000629104 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
CHD2-216ENST00000629104 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
CHD2-216ENST00000629104 ERVV-2B6SEH9 535 aa11.81□□□□□ -0.52
CHD2-216ENST00000629104 TXNRD1Q16881 649 aa11.81□□□□□ -0.52
CHD2-216ENST00000629104 PIGBQ92521 554 aa11.81□□□□□ -0.52
CHD2-216ENST00000629104 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
CHD2-216ENST00000629104 PAPPAQ13219 1627 aa11.81□□□□□ -0.52
CHD2-216ENST00000629104 MRC1P22897 1456 aa11.81□□□□□ -0.52
CHD2-216ENST00000629104 MAP3K5Q99683 1374 aa11.8□□□□□ -0.52
CHD2-216ENST00000629104 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
CHD2-216ENST00000629104 TAF1LQ8IZX4 1826 aa11.8□□□□□ -0.52
CHD2-216ENST00000629104 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
CHD2-216ENST00000629104 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
CHD2-216ENST00000629104 C5P01031 1676 aa11.79□□□□□ -0.52
CHD2-216ENST00000629104 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
CHD2-216ENST00000629104 RNMTO43148 476 aaKnown RBP11.79□□□□□ -0.52
CHD2-216ENST00000629104 CABP4P57796 275 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms