RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
DDX41-219ENST00000629036 CHD4Q14839 1912 aa15.25■□□□□ 0.03
DDX41-219ENST00000629036 ITGB4P16144 1822 aa15.24■□□□□ 0.03
DDX41-219ENST00000629036 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
DDX41-219ENST00000629036 SENP3-EIF4A1A0A087X0R7 540 aa15.24■□□□□ 0.03
DDX41-219ENST00000629036 DDB1Q16531 1140 aa15.24■□□□□ 0.03
DDX41-219ENST00000629036 SPON1Q9HCB6 807 aa15.24■□□□□ 0.03
DDX41-219ENST00000629036 IL2RBP14784 551 aa15.23■□□□□ 0.03
DDX41-219ENST00000629036 NBPF14Q5TI25 921 aa15.23■□□□□ 0.03
DDX41-219ENST00000629036 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
DDX41-219ENST00000629036 TNNT2P45379 298 aaPredicted RBP15.22■□□□□ 0.03
DDX41-219ENST00000629036 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
DDX41-219ENST00000629036 USHBP1Q8N6Y0 703 aa15.22■□□□□ 0.03
DDX41-219ENST00000629036 PARD3Q8TEW0 1356 aa15.22■□□□□ 0.03
DDX41-219ENST00000629036 LY75O60449 1722 aa15.21■□□□□ 0.03
DDX41-219ENST00000629036 KCNQ2O43526 872 aa15.21■□□□□ 0.03
DDX41-219ENST00000629036 PDE3BQ13370 1112 aa15.21■□□□□ 0.03
DDX41-219ENST00000629036 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.03
DDX41-219ENST00000629036 PTF1AQ7RTS3 328 aa15.21■□□□□ 0.03
DDX41-219ENST00000629036 MORC1Q86VD1 984 aa15.21■□□□□ 0.03
DDX41-219ENST00000629036 IGSF1Q8N6C5 1336 aa15.2■□□□□ 0.02
DDX41-219ENST00000629036 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
DDX41-219ENST00000629036 PAPPAQ13219 1627 aa15.2■□□□□ 0.02
DDX41-219ENST00000629036 IFFO2Q5TF58 517 aa15.19■□□□□ 0.02
DDX41-219ENST00000629036 EYA1Q99502 592 aa15.19■□□□□ 0.02
DDX41-219ENST00000629036 CC2D1BQ5T0F9 858 aaKnown RBP15.18■□□□□ 0.02
DDX41-219ENST00000629036 KDRP35968 1356 aa15.18■□□□□ 0.02
DDX41-219ENST00000629036 PLEKHG2Q9H7P9 1386 aa15.18■□□□□ 0.02
DDX41-219ENST00000629036 UTRNP46939 3433 aa15.17■□□□□ 0.02
DDX41-219ENST00000629036 EXOC5O00471 708 aa15.17■□□□□ 0.02
DDX41-219ENST00000629036 PPM1GO15355 546 aaPredicted RBP15.17■□□□□ 0.02
DDX41-219ENST00000629036 ADAMTS7Q9UKP4 1686 aa15.16■□□□□ 0.02
DDX41-219ENST00000629036 CASZ1Q86V15 1759 aa15.16■□□□□ 0.02
DDX41-219ENST00000629036 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
DDX41-219ENST00000629036 IL13P35225 146 aa15.15■□□□□ 0.02
DDX41-219ENST00000629036 SCN11AQ9UI33 1791 aa15.15■□□□□ 0.02
DDX41-219ENST00000629036 MTHFSP49914 203 aa15.14■□□□□ 0.01
DDX41-219ENST00000629036 TAF1LQ8IZX4 1826 aa15.14■□□□□ 0.01
DDX41-219ENST00000629036 ZEB1P37275 1124 aaPredicted RBP15.13■□□□□ 0.01
DDX41-219ENST00000629036 ZCRB1Q8TBF4 217 aaKnown RBP15.13■□□□□ 0.01
DDX41-219ENST00000629036 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
DDX41-219ENST00000629036 CYP27B1O15528 508 aa15.12■□□□□ 0.01
DDX41-219ENST00000629036 C1QTNF8P60827 252 aa15.12■□□□□ 0.01
DDX41-219ENST00000629036 AEBP1Q8IUX7 1158 aa15.12■□□□□ 0.01
DDX41-219ENST00000629036 QSER1Q2KHR3 1735 aa15.12■□□□□ 0.01
DDX41-219ENST00000629036 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
DDX41-219ENST00000629036 RAPGEF4Q8WZA2 1011 aa15.1■□□□□ 0.01
DDX41-219ENST00000629036 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
DDX41-219ENST00000629036 PCDH11XQ9BZA7 1347 aa15.1■□□□□ 0.01
DDX41-219ENST00000629036 PCDH11YQ9BZA8 1340 aa15.1■□□□□ 0.01
DDX41-219ENST00000629036 SIPA1L3O60292 1781 aaPredicted RBP15.09■□□□□ 0.01
DDX41-219ENST00000629036 ZBTB7AO95365 584 aa15.09■□□□□ 0.01
DDX41-219ENST00000629036 PROM2Q8N271 834 aa15.09■□□□□ 0.01
DDX41-219ENST00000629036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.09■□□□□ 0.01
DDX41-219ENST00000629036 CEP350Q5VT06 3117 aa15.09■□□□□ 0.01
DDX41-219ENST00000629036 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
DDX41-219ENST00000629036 PLSCR1O15162 318 aa15.08■□□□□ 0
DDX41-219ENST00000629036 PPP2R1AP30153 589 aa15.08■□□□□ 0
DDX41-219ENST00000629036 DDX54Q8TDD1 881 aaKnown RBP15.08■□□□□ 0
DDX41-219ENST00000629036 ACSBG1Q96GR2 724 aa15.08■□□□□ 0
DDX41-219ENST00000629036 ANO8Q9HCE9 1232 aaPredicted RBP15.08■□□□□ 0
DDX41-219ENST00000629036 ATF5Q9Y2D1 282 aaPredicted RBP15.08■□□□□ 0
DDX41-219ENST00000629036 C5P01031 1676 aa15.08■□□□□ 0
DDX41-219ENST00000629036 ZNF831Q5JPB2 1677 aa15.07■□□□□ 0
DDX41-219ENST00000629036 NKX1-1Q15270 411 aaPredicted RBP15.07■□□□□ 0
DDX41-219ENST00000629036 DLG5Q8TDM6 1919 aa15.07■□□□□ 0
DDX41-219ENST00000629036 MRC1P22897 1456 aa15.06■□□□□ 0
DDX41-219ENST00000629036 CICQ96RK0 1608 aaPredicted RBP15.06■□□□□ 0
DDX41-219ENST00000629036 CNGB1Q14028 1251 aaPredicted RBP15.05■□□□□ -0
DDX41-219ENST00000629036 COL24A1Q17RW2 1714 aa15.05■□□□□ -0
DDX41-219ENST00000629036 COL5A3P25940 1745 aaPredicted RBP15.04■□□□□ -0
DDX41-219ENST00000629036 PHKG2P15735 406 aa15.04■□□□□ -0
DDX41-219ENST00000629036 DDX10Q13206 875 aaKnown RBP15.04■□□□□ -0
DDX41-219ENST00000629036 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
DDX41-219ENST00000629036 FHDC1Q9C0D6 1143 aaPredicted RBP15.04■□□□□ -0
DDX41-219ENST00000629036 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
DDX41-219ENST00000629036 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
DDX41-219ENST00000629036 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
DDX41-219ENST00000629036 UBR3Q6ZT12 1888 aa15.02■□□□□ -0
DDX41-219ENST00000629036 PTGER2P43116 358 aa15.02■□□□□ -0
DDX41-219ENST00000629036 SYT17Q9BSW7 474 aa15.02■□□□□ -0
DDX41-219ENST00000629036 SPG7Q9UQ90 795 aa15.02■□□□□ -0
DDX41-219ENST00000629036 TJP1Q07157 1748 aa15.01□□□□□ -0.01
DDX41-219ENST00000629036 HMOX1P09601 288 aa15□□□□□ -0.01
DDX41-219ENST00000629036 TXNRD1Q16881 649 aa15□□□□□ -0.01
DDX41-219ENST00000629036 LRRC4BQ9NT99 713 aa15□□□□□ -0.01
DDX41-219ENST00000629036 C4BP0C0L5 1744 aa15□□□□□ -0.01
DDX41-219ENST00000629036 GIGYF1O75420 1035 aaPredicted RBP14.99□□□□□ -0.01
DDX41-219ENST00000629036 IFNL2Q8IZJ0 200 aa14.99□□□□□ -0.01
DDX41-219ENST00000629036 MYH14Q7Z406 1995 aaKnown RBP14.98□□□□□ -0.01
DDX41-219ENST00000629036 RSPH6AQ9H0K4 717 aa14.98□□□□□ -0.01
DDX41-219ENST00000629036 AMOTQ4VCS5 1084 aa14.97□□□□□ -0.01
DDX41-219ENST00000629036 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
DDX41-219ENST00000629036 ZNF530Q6P9A1 599 aaPredicted RBP14.97□□□□□ -0.01
DDX41-219ENST00000629036 PIGBQ92521 554 aa14.97□□□□□ -0.01
DDX41-219ENST00000629036 GOLGB1Q14789 3259 aaKnown RBP14.97□□□□□ -0.01
DDX41-219ENST00000629036 STK32BQ9NY57 414 aa14.96□□□□□ -0.01
DDX41-219ENST00000629036 PALLDQ8WX93 1383 aa14.96□□□□□ -0.02
DDX41-219ENST00000629036 RALBP1Q15311 655 aa14.95□□□□□ -0.02
DDX41-219ENST00000629036 ZNF827Q17R98 1081 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms