RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 EYA1Q99502 592 aa28.12■■■□□ 2.09
CIRBP-246ENST00000628979 BCL9O00512 1426 aa28.11■■■□□ 2.09
CIRBP-246ENST00000628979 KCNQ2O43526 872 aa28.11■■■□□ 2.09
CIRBP-246ENST00000628979 SHANK3Q9BYB0 1731 aa28.05■■■□□ 2.08
CIRBP-246ENST00000628979 PARD3Q8TEW0 1356 aa28.04■■■□□ 2.08
CIRBP-246ENST00000628979 PSDA5PKW4 1024 aaPredicted RBP28.04■■■□□ 2.08
CIRBP-246ENST00000628979 MTHFSP49914 203 aa28.04■■■□□ 2.08
CIRBP-246ENST00000628979 NHSQ6T4R5 1651 aa28.03■■■□□ 2.08
CIRBP-246ENST00000628979 PLSCR1O15162 318 aa28.02■■■□□ 2.08
CIRBP-246ENST00000628979 SYTL4Q96C24 671 aaPredicted RBP28.02■■■□□ 2.08
CIRBP-246ENST00000628979 NPC1L1Q9UHC9 1359 aa28.01■■■□□ 2.07
CIRBP-246ENST00000628979 NCAPD2Q15021 1401 aa28.01■■■□□ 2.07
CIRBP-246ENST00000628979 PCDH11XQ9BZA7 1347 aa28■■■□□ 2.07
CIRBP-246ENST00000628979 PCDH11YQ9BZA8 1340 aa28■■■□□ 2.07
CIRBP-246ENST00000628979 RREB1Q92766 1687 aa28■■■□□ 2.07
CIRBP-246ENST00000628979 IGSF1Q8N6C5 1336 aa27.98■■■□□ 2.07
CIRBP-246ENST00000628979 PRIM1P49642 420 aaKnown RBP27.98■■■□□ 2.07
CIRBP-246ENST00000628979 R3HDM1Q15032 1099 aaKnown RBP27.98■■■□□ 2.07
CIRBP-246ENST00000628979 SPG7Q9UQ90 795 aa27.98■■■□□ 2.07
CIRBP-246ENST00000628979 NUP188Q5SRE5 1749 aa27.98■■■□□ 2.07
CIRBP-246ENST00000628979 DOT1LQ8TEK3 1739 aa27.96■■■□□ 2.07
CIRBP-246ENST00000628979 CYP27B1O15528 508 aa27.96■■■□□ 2.07
CIRBP-246ENST00000628979 NBPF14Q5TI25 921 aa27.96■■■□□ 2.07
CIRBP-246ENST00000628979 BTAF1O14981 1849 aa27.96■■■□□ 2.07
CIRBP-246ENST00000628979 IL13P35225 146 aa27.95■■■□□ 2.06
CIRBP-246ENST00000628979 ZEB1P37275 1124 aaPredicted RBP27.95■■■□□ 2.06
CIRBP-246ENST00000628979 RGPD3A6NKT7 1758 aaPredicted RBP27.94■■■□□ 2.06
CIRBP-246ENST00000628979 RGPD4Q7Z3J3 1758 aa27.94■■■□□ 2.06
CIRBP-246ENST00000628979 TXNRD1Q16881 649 aa27.94■■■□□ 2.06
CIRBP-246ENST00000628979 PROM2Q8N271 834 aa27.94■■■□□ 2.06
CIRBP-246ENST00000628979 PKD1L3Q7Z443 1732 aa27.94■■■□□ 2.06
CIRBP-246ENST00000628979 SULT6B1Q6IMI4 303 aa27.93■■■□□ 2.06
CIRBP-246ENST00000628979 AEBP1Q8IUX7 1158 aa27.93■■■□□ 2.06
CIRBP-246ENST00000628979 DIAPH1O60610 1272 aaKnown RBP27.9■■■□□ 2.06
CIRBP-246ENST00000628979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.9■■■□□ 2.064e-13■□□□□ 8.8
CIRBP-246ENST00000628979 PLEKHO1Q53GL0 409 aaPredicted RBP27.88■■■□□ 2.05
CIRBP-246ENST00000628979 IFNL2Q8IZJ0 200 aa27.88■■■□□ 2.05
CIRBP-246ENST00000628979 HMOX1P09601 288 aa27.86■■■□□ 2.05
CIRBP-246ENST00000628979 PHKG2P15735 406 aa27.86■■■□□ 2.05
CIRBP-246ENST00000628979 DDX10Q13206 875 aaKnown RBP27.86■■■□□ 2.05
CIRBP-246ENST00000628979 MPRIPQ6WCQ1 1025 aa27.86■■■□□ 2.05
CIRBP-246ENST00000628979 NKX1-1Q15270 411 aaPredicted RBP27.84■■■□□ 2.05
CIRBP-246ENST00000628979 ANO8Q9HCE9 1232 aaPredicted RBP27.84■■■□□ 2.05
CIRBP-246ENST00000628979 U2SURPO15042 1029 aaKnown RBP27.83■■■□□ 2.05
CIRBP-246ENST00000628979 PPP2R1AP30153 589 aa27.83■■■□□ 2.05
CIRBP-246ENST00000628979 ZNF530Q6P9A1 599 aaPredicted RBP27.83■■■□□ 2.05
CIRBP-246ENST00000628979 TOGARAM1Q9Y4F4 1720 aa27.82■■■□□ 2.04
CIRBP-246ENST00000628979 AMOTQ4VCS5 1084 aa27.82■■■□□ 2.04
CIRBP-246ENST00000628979 CFAP53Q96M91 514 aa27.82■■■□□ 2.04
CIRBP-246ENST00000628979 STK32BQ9NY57 414 aa27.82■■■□□ 2.04
CIRBP-246ENST00000628979 ITGB4P16144 1822 aa27.81■■■□□ 2.04
CIRBP-246ENST00000628979 KCNQ4P56696 695 aa27.8■■■□□ 2.04
CIRBP-246ENST00000628979 LRRC4BQ9NT99 713 aa27.8■■■□□ 2.04
CIRBP-246ENST00000628979 KDRP35968 1356 aa27.8■■■□□ 2.04
CIRBP-246ENST00000628979 COL3A1P02461 1466 aaPredicted RBP27.79■■■□□ 2.04
CIRBP-246ENST00000628979 PLEKHG2Q9H7P9 1386 aa27.79■■■□□ 2.04
CIRBP-246ENST00000628979 C1orf141Q5JVX7 400 aa27.78■■■□□ 2.04
CIRBP-246ENST00000628979 PIGBQ92521 554 aa27.77■■■□□ 2.04
CIRBP-246ENST00000628979 SLC15A2Q16348 729 aa27.76■■■□□ 2.03
CIRBP-246ENST00000628979 SLC27A3Q5K4L6 730 aa27.76■■■□□ 2.03
CIRBP-246ENST00000628979 TMOD3Q9NYL9 352 aa27.76■■■□□ 2.03
CIRBP-246ENST00000628979 HSP90AB1P08238 724 aaKnown RBP27.75■■■□□ 2.03
CIRBP-246ENST00000628979 CCNL1Q9UK58 526 aaPredicted RBP27.75■■■□□ 2.03
CIRBP-246ENST00000628979 LY75O60449 1722 aa27.74■■■□□ 2.03
CIRBP-246ENST00000628979 DCAF5Q96JK2 942 aa27.73■■■□□ 2.03
CIRBP-246ENST00000628979 NUDCQ9Y266 331 aa27.72■■■□□ 2.03
CIRBP-246ENST00000628979 PALLDQ8WX93 1383 aa27.72■■■□□ 2.03
CIRBP-246ENST00000628979 SMARCC1Q92922 1105 aaPredicted RBP27.71■■■□□ 2.03
CIRBP-246ENST00000628979 ZNF827Q17R98 1081 aa27.7■■■□□ 2.02
CIRBP-246ENST00000628979 PDGFDQ9GZP0 370 aaPredicted RBP27.7■■■□□ 2.02
CIRBP-246ENST00000628979 ERVV-2B6SEH9 535 aa27.69■■■□□ 2.02
CIRBP-246ENST00000628979 CABP4P57796 275 aa27.69■■■□□ 2.02
CIRBP-246ENST00000628979 PAPPAQ13219 1627 aa27.69■■■□□ 2.02
CIRBP-246ENST00000628979 MTHFSDQ2M296 383 aaKnown RBP27.68■■■□□ 2.02
CIRBP-246ENST00000628979 AKAP4Q5JQC9 854 aa27.68■■■□□ 2.02
CIRBP-246ENST00000628979 ASAP1Q9ULH1 1129 aa27.68■■■□□ 2.02
CIRBP-246ENST00000628979 KDM6AO15550 1401 aaPredicted RBP27.67■■■□□ 2.02
CIRBP-246ENST00000628979 U2AF1L5P0DN76 240 aaPredicted RBP27.67■■■□□ 2.02
CIRBP-246ENST00000628979 U2AF1Q01081 240 aaKnown RBP eCLIP27.67■■■□□ 2.02
CIRBP-246ENST00000628979 AKT1S1Q96B36 256 aa27.66■■■□□ 2.02
CIRBP-246ENST00000628979 LRP5O75197 1615 aa27.66■■■□□ 2.02
CIRBP-246ENST00000628979 ATG3Q9NT62 314 aa27.65■■■□□ 2.02
CIRBP-246ENST00000628979 ZBTB7AO95365 584 aa27.64■■■□□ 2.02
CIRBP-246ENST00000628979 RALBP1Q15311 655 aa27.64■■■□□ 2.02
CIRBP-246ENST00000628979 TFCP2L1Q9NZI6 479 aa27.64■■■□□ 2.02
CIRBP-246ENST00000628979 PRKAR2BP31323 418 aa27.63■■■□□ 2.01
CIRBP-246ENST00000628979 SPON1Q9HCB6 807 aa27.63■■■□□ 2.01
CIRBP-246ENST00000628979 CASZ1Q86V15 1759 aa27.63■■■□□ 2.01
CIRBP-246ENST00000628979 NFATC2IPQ8NCF5 419 aa27.62■■■□□ 2.01
CIRBP-246ENST00000628979 LGR6Q9HBX8 967 aa27.62■■■□□ 2.01
CIRBP-246ENST00000628979 SRCAPQ6ZRS2 3230 aa27.62■■■□□ 2.01
CIRBP-246ENST00000628979 RSPH6AQ9H0K4 717 aa27.61■■■□□ 2.01
CIRBP-246ENST00000628979 ATF5Q9Y2D1 282 aaPredicted RBP27.61■■■□□ 2.01
CIRBP-246ENST00000628979 LOC102724428A0A0B4J2F2 783 aa27.6■■■□□ 2.01
CIRBP-246ENST00000628979 SIK1P57059 783 aa27.6■■■□□ 2.01
CIRBP-246ENST00000628979 RBM42Q9BTD8 480 aaKnown RBP27.6■■■□□ 2.01
CIRBP-246ENST00000628979 SCN11AQ9UI33 1791 aa27.6■■■□□ 2.01
CIRBP-246ENST00000628979 C5P01031 1676 aa27.59■■■□□ 2.01
CIRBP-246ENST00000628979 RNMTO43148 476 aaKnown RBP27.59■■■□□ 2.01
CIRBP-246ENST00000628979 PHACTR3Q96KR7 559 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms