RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 DDX54Q8TDD1 881 aaKnown RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 ANKRD30BQ9BXX2 1392 aa8.09□□□□□ -1.11
CHD2-208ENST00000626874 GRIN2BQ13224 1484 aa8.09□□□□□ -1.11
CHD2-208ENST00000626874 RAI14Q9P0K7 980 aa8.09□□□□□ -1.11
CHD2-208ENST00000626874 BAG4O95429 457 aaKnown RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 ZNF530Q6P9A1 599 aaPredicted RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 APBB1IPQ7Z5R6 666 aaPredicted RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 BCL2L13Q9BXK5 485 aa8.09□□□□□ -1.11
CHD2-208ENST00000626874 ATAD2Q6PL18 1390 aa8.09□□□□□ -1.11
CHD2-208ENST00000626874 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 NCBP1Q09161 790 aaKnown RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 SPTY2D1Q68D10 685 aaPredicted RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 TAOK3Q9H2K8 898 aa8.09□□□□□ -1.11
CHD2-208ENST00000626874 RNF41Q9H4P4 317 aaPredicted RBP8.09□□□□□ -1.11
CHD2-208ENST00000626874 ANKIB1Q9P2G1 1089 aa8.09□□□□□ -1.11
CHD2-208ENST00000626874 EPRSP07814 1512 aaKnown RBP8.09□□□□□ -1.12
CHD2-208ENST00000626874 USP5P45974 858 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 AMOTQ4VCS5 1084 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 AXDND1Q5T1B0 1012 aaPredicted RBP8.08□□□□□ -1.12
CHD2-208ENST00000626874 TMOD3Q9NYL9 352 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 SMTNL1A8MU46 457 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 APAF1O14727 1248 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 SLU7O95391 586 aaKnown RBP8.08□□□□□ -1.12
CHD2-208ENST00000626874 SERPINC1P01008 464 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 LDHCP07864 332 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 CCDC82Q8N4S0 544 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 CRBNQ96SW2 442 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 TRIM5Q9C035 493 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 COG6Q9Y2V7 657 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 CCDC66A2RUB6 948 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 IL27Q8NEV9 243 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 LRRC27Q9C0I9 530 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 RBM19Q9Y4C8 960 aaKnown RBP8.08□□□□□ -1.12
CHD2-208ENST00000626874 USP8P40818 1118 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 DZIP1Q86YF9 867 aaKnown RBP8.08□□□□□ -1.12
CHD2-208ENST00000626874 MKNK2Q9HBH9 465 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 COMMD10Q9Y6G5 202 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 POLR3DP05423 398 aaPredicted RBP8.08□□□□□ -1.12
CHD2-208ENST00000626874 TSNARE1Q96NA8 513 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 UTP14AQ9BVJ6 771 aaKnown RBP8.08□□□□□ -1.12
CHD2-208ENST00000626874 HLA-DOAP06340 250 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 HMOX1P09601 288 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 AIDAQ96BJ3 306 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 TSPYL1Q9H0U9 437 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 U3KPZ7 1027 aaPredicted RBP8.08□□□□□ -1.12
CHD2-208ENST00000626874 WIZO95785 1651 aa8.08□□□□□ -1.12
CHD2-208ENST00000626874 ZSCAN31Q96LW9 406 aaPredicted RBP8.07□□□□□ -1.12
CHD2-208ENST00000626874 ARID3AQ99856 593 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 CCDC192P0DO97 292 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 FERP16591 822 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 CCDC178Q5BJE1 867 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 ST5P78524 1137 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 RTEL1-TNFRSF6BF6WH68 1400 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 BAG3O95817 575 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 FKBP15Q5T1M5 1219 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 IQCA1Q86XH1 822 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 CABP5Q9NP86 173 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 CCDC172P0C7W6 258 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 SSR1P43307 286 aaKnown RBP8.07□□□□□ -1.12
CHD2-208ENST00000626874 KRT85P78386 507 aa8.07□□□□□ -1.12
CHD2-208ENST00000626874 SSBP05455 408 aaKnown RBP eCLIP8.06□□□□□ -1.12
CHD2-208ENST00000626874 BRPF1P55201 1214 aaPredicted RBP8.06□□□□□ -1.12
CHD2-208ENST00000626874 WDR78Q5VTH9 848 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 NUP133Q8WUM0 1156 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 C22orf23Q9BZE7 217 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 ATP2B1P20020 1258 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 GSTO1P78417 241 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 HDAC9Q9UKV0 1011 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 WDR33Q9C0J8 1336 aaKnown RBP8.06□□□□□ -1.12
CHD2-208ENST00000626874 ZNF444Q8N0Y2 327 aaPredicted RBP8.06□□□□□ -1.12
CHD2-208ENST00000626874 ZGPATQ8N5A5 531 aaKnown RBP8.06□□□□□ -1.12
CHD2-208ENST00000626874 ANKRD50Q9ULJ7 1429 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 NCOA2Q15596 1464 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 GCOM1H8Y6P7 765 aaPredicted RBP8.06□□□□□ -1.12
CHD2-208ENST00000626874 MYZAPP0CAP1 466 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 SLC5A1P13866 664 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 FOSBP53539 338 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 MAP3K12Q12852 859 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 CCDC117Q8IWD4 279 aaPredicted RBP8.06□□□□□ -1.12
CHD2-208ENST00000626874 CTCFLQ8NI51 663 aaPredicted RBP8.06□□□□□ -1.12
CHD2-208ENST00000626874 GBP3Q9H0R5 595 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 AMPD3Q01432 767 aa8.06□□□□□ -1.12
CHD2-208ENST00000626874 HECW1Q76N89 1606 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 CCDC148Q8NFR7 591 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 CDC5LQ99459 802 aaKnown RBP8.05□□□□□ -1.12
CHD2-208ENST00000626874 PLVAPQ9BX97 442 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 KIF5BP33176 963 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 ME1P48163 572 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 FKBP4Q02790 459 aaKnown RBP eCLIP8.05□□□□□ -1.12
CHD2-208ENST00000626874 NUTM2GQ5VZR2 741 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 ATAD2BQ9ULI0 1458 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 POLD1P28340 1107 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 TTLL5Q6EMB2 1281 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 TTC12Q9H892 705 aaPredicted RBP8.05□□□□□ -1.12
CHD2-208ENST00000626874 BRD4O60885 1362 aaPredicted RBP8.05□□□□□ -1.12
CHD2-208ENST00000626874 NBPF8Q3BBV2 869 aa8.05□□□□□ -1.12
CHD2-208ENST00000626874 NBPF14Q5TI25 921 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms