RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SBF2Q86WG5 1849 aa18.89■□□□□ 0.61
SNRPA1-216ENST00000626000 FAM182BQ5T319 152 aa18.89■□□□□ 0.61
SNRPA1-216ENST00000626000 MSH5O43196 834 aa18.88■□□□□ 0.61
SNRPA1-216ENST00000626000 TRIM37O94972 964 aa18.88■□□□□ 0.61
SNRPA1-216ENST00000626000 BCL11BQ9C0K0 894 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-216ENST00000626000 SPG7Q9UQ90 795 aa18.88■□□□□ 0.61
SNRPA1-216ENST00000626000 PKD1L3Q7Z443 1732 aa18.88■□□□□ 0.61
SNRPA1-216ENST00000626000 RGPD3A6NKT7 1758 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-216ENST00000626000 RGPD4Q7Z3J3 1758 aa18.87■□□□□ 0.61
SNRPA1-216ENST00000626000 USHBP1Q8N6Y0 703 aa18.87■□□□□ 0.61
SNRPA1-216ENST00000626000 NHSQ6T4R5 1651 aa18.86■□□□□ 0.61
SNRPA1-216ENST00000626000 DIAPH1O60610 1272 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-216ENST00000626000 KDRP35968 1356 aa18.84■□□□□ 0.61
SNRPA1-216ENST00000626000 SHANK3Q9BYB0 1731 aa18.84■□□□□ 0.61
SNRPA1-216ENST00000626000 APBA3O96018 575 aa18.84■□□□□ 0.61
SNRPA1-216ENST00000626000 IL13P35225 146 aa18.84■□□□□ 0.61
SNRPA1-216ENST00000626000 DDX10Q13206 875 aaKnown RBP18.84■□□□□ 0.61
SNRPA1-216ENST00000626000 RALBP1Q15311 655 aa18.84■□□□□ 0.61
SNRPA1-216ENST00000626000 AMOTQ4VCS5 1084 aa18.84■□□□□ 0.61
SNRPA1-216ENST00000626000 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
SNRPA1-216ENST00000626000 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
SNRPA1-216ENST00000626000 PLSCR1O15162 318 aa18.82■□□□□ 0.6
SNRPA1-216ENST00000626000 PPP2R1AP30153 589 aa18.82■□□□□ 0.6
SNRPA1-216ENST00000626000 HMGB2P26583 209 aaKnown RBP18.81■□□□□ 0.6
SNRPA1-216ENST00000626000 CNGB1Q14028 1251 aaPredicted RBP18.81■□□□□ 0.6
SNRPA1-216ENST00000626000 PLEKHO1Q53GL0 409 aaPredicted RBP18.81■□□□□ 0.6
SNRPA1-216ENST00000626000 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
SNRPA1-216ENST00000626000 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
SNRPA1-216ENST00000626000 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
SNRPA1-216ENST00000626000 DEFB132Q7Z7B7 95 aa18.8■□□□□ 0.6
SNRPA1-216ENST00000626000 SULT6B1Q6IMI4 303 aa18.79■□□□□ 0.6
SNRPA1-216ENST00000626000 IFNL2Q8IZJ0 200 aa18.79■□□□□ 0.6
SNRPA1-216ENST00000626000 DOT1LQ8TEK3 1739 aa18.78■□□□□ 0.6
SNRPA1-216ENST00000626000 KAT6BQ8WYB5 2073 aa18.77■□□□□ 0.6
SNRPA1-216ENST00000626000 EN1Q05925 392 aaPredicted RBP18.77■□□□□ 0.6
SNRPA1-216ENST00000626000 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
SNRPA1-216ENST00000626000 CAMKK2Q96RR4 588 aa18.77■□□□□ 0.6
SNRPA1-216ENST00000626000 RREB1Q92766 1687 aa18.76■□□□□ 0.59
SNRPA1-216ENST00000626000 BTAF1O14981 1849 aa18.75■□□□□ 0.59
SNRPA1-216ENST00000626000 CYP27B1O15528 508 aa18.75■□□□□ 0.59
SNRPA1-216ENST00000626000 C1orf141Q5JVX7 400 aa18.75■□□□□ 0.59
SNRPA1-216ENST00000626000 U2SURPO15042 1029 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-216ENST00000626000 PHKG2P15735 406 aa18.74■□□□□ 0.59
SNRPA1-216ENST00000626000 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
SNRPA1-216ENST00000626000 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
SNRPA1-216ENST00000626000 NBPF14Q5TI25 921 aa18.73■□□□□ 0.59
SNRPA1-216ENST00000626000 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
SNRPA1-216ENST00000626000 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
SNRPA1-216ENST00000626000 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
SNRPA1-216ENST00000626000 EZH2Q15910 746 aaKnown RBP18.72■□□□□ 0.59
SNRPA1-216ENST00000626000 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
SNRPA1-216ENST00000626000 DCAF5Q96JK2 942 aa18.72■□□□□ 0.59
SNRPA1-216ENST00000626000 KCNQ2O43526 872 aa18.71■□□□□ 0.59
SNRPA1-216ENST00000626000 PNNQ9H307 717 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-216ENST00000626000 NEFMP07197 916 aa18.7■□□□□ 0.58
SNRPA1-216ENST00000626000 HMOX1P09601 288 aa18.7■□□□□ 0.58
SNRPA1-216ENST00000626000 SLC27A3Q5K4L6 730 aa18.7■□□□□ 0.58
SNRPA1-216ENST00000626000 NUP188Q5SRE5 1749 aa18.7■□□□□ 0.58
SNRPA1-216ENST00000626000 SMARCC1Q92922 1105 aaPredicted RBP18.7■□□□□ 0.58
SNRPA1-216ENST00000626000 ERVV-2B6SEH9 535 aa18.69■□□□□ 0.58
SNRPA1-216ENST00000626000 FCHSD2O94868 740 aa18.69■□□□□ 0.58
SNRPA1-216ENST00000626000 AKAP4Q5JQC9 854 aa18.69■□□□□ 0.58
SNRPA1-216ENST00000626000 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
SNRPA1-216ENST00000626000 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
SNRPA1-216ENST00000626000 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNRPA1-216ENST00000626000 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
SNRPA1-216ENST00000626000 TMOD3Q9NYL9 352 aa18.68■□□□□ 0.58
SNRPA1-216ENST00000626000 ITGB4P16144 1822 aa18.67■□□□□ 0.58
SNRPA1-216ENST00000626000 TOGARAM1Q9Y4F4 1720 aa18.67■□□□□ 0.58
SNRPA1-216ENST00000626000 PRKRIP1Q9H875 184 aaPredicted RBP18.67■□□□□ 0.58
SNRPA1-216ENST00000626000 PTF1AQ7RTS3 328 aa18.66■□□□□ 0.58
SNRPA1-216ENST00000626000 LY75O60449 1722 aa18.66■□□□□ 0.58
SNRPA1-216ENST00000626000 MPRIPQ6WCQ1 1025 aa18.65■□□□□ 0.58
SNRPA1-216ENST00000626000 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
SNRPA1-216ENST00000626000 SCN11AQ9UI33 1791 aa18.63■□□□□ 0.57
SNRPA1-216ENST00000626000 PRKAR2BP31323 418 aa18.63■□□□□ 0.57
SNRPA1-216ENST00000626000 CABP4P57796 275 aa18.63■□□□□ 0.57
SNRPA1-216ENST00000626000 STK32BQ9NY57 414 aa18.62■□□□□ 0.57
SNRPA1-216ENST00000626000 PALLDQ8WX93 1383 aa18.62■□□□□ 0.57
SNRPA1-216ENST00000626000 KDM6AO15550 1401 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-216ENST00000626000 MAP3K5Q99683 1374 aa18.61■□□□□ 0.57
SNRPA1-216ENST00000626000 MTHFSDQ2M296 383 aaKnown RBP18.61■□□□□ 0.57
SNRPA1-216ENST00000626000 PIGBQ92521 554 aa18.61■□□□□ 0.57
SNRPA1-216ENST00000626000 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
SNRPA1-216ENST00000626000 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
SNRPA1-216ENST00000626000 ANP32CO43423 234 aa18.6■□□□□ 0.57
SNRPA1-216ENST00000626000 PROM2Q8N271 834 aa18.6■□□□□ 0.57
SNRPA1-216ENST00000626000 CCNL1Q9UK58 526 aaPredicted RBP18.6■□□□□ 0.57
SNRPA1-216ENST00000626000 MRC1P22897 1456 aa18.59■□□□□ 0.57
SNRPA1-216ENST00000626000 MAPK8IP3Q9UPT6 1336 aa18.59■□□□□ 0.57
SNRPA1-216ENST00000626000 PAPPAQ13219 1627 aa18.59■□□□□ 0.57
SNRPA1-216ENST00000626000 ZNF831Q5JPB2 1677 aa18.58■□□□□ 0.57
SNRPA1-216ENST00000626000 HTATSF1O43719 755 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-216ENST00000626000 WDR43Q15061 677 aaKnown RBP eCLIP18.58■□□□□ 0.56
SNRPA1-216ENST00000626000 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-216ENST00000626000 RTF1Q92541 710 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-216ENST00000626000 VIRMAQ69YN4 1812 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-216ENST00000626000 RNMTO43148 476 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-216ENST00000626000 SLC15A2Q16348 729 aa18.56■□□□□ 0.56
SNRPA1-216ENST00000626000 SLC52A2Q9HAB3 445 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms