RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 BAG6P46379 1132 aa12.46□□□□□ -0.41
NELFE-214ENST00000625905 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
NELFE-214ENST00000625905 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
NELFE-214ENST00000625905 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
NELFE-214ENST00000625905 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
NELFE-214ENST00000625905 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
NELFE-214ENST00000625905 ZCRB1Q8TBF4 217 aaKnown RBP12.45□□□□□ -0.42
NELFE-214ENST00000625905 RGPD3A6NKT7 1758 aaPredicted RBP12.44□□□□□ -0.42
NELFE-214ENST00000625905 RGPD4Q7Z3J3 1758 aa12.44□□□□□ -0.42
NELFE-214ENST00000625905 IL13P35225 146 aa12.44□□□□□ -0.42
NELFE-214ENST00000625905 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
NELFE-214ENST00000625905 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
NELFE-214ENST00000625905 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
NELFE-214ENST00000625905 PPP2R1AP30153 589 aa12.43□□□□□ -0.42
NELFE-214ENST00000625905 CFAP53Q96M91 514 aa12.43□□□□□ -0.42
NELFE-214ENST00000625905 KDRP35968 1356 aa12.43□□□□□ -0.42
NELFE-214ENST00000625905 APBA3O96018 575 aa12.42□□□□□ -0.42
NELFE-214ENST00000625905 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
NELFE-214ENST00000625905 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
NELFE-214ENST00000625905 RREB1Q92766 1687 aa12.42□□□□□ -0.42
NELFE-214ENST00000625905 SULT6B1Q6IMI4 303 aa12.41□□□□□ -0.42
NELFE-214ENST00000625905 ACSBG1Q96GR2 724 aa12.41□□□□□ -0.42
NELFE-214ENST00000625905 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
NELFE-214ENST00000625905 BTAF1O14981 1849 aa12.41□□□□□ -0.42
NELFE-214ENST00000625905 TOGARAM1Q9Y4F4 1720 aa12.4□□□□□ -0.42
NELFE-214ENST00000625905 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
NELFE-214ENST00000625905 EN1Q05925 392 aaPredicted RBP12.4□□□□□ -0.42
NELFE-214ENST00000625905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.42
NELFE-214ENST00000625905 NUP188Q5SRE5 1749 aa12.4□□□□□ -0.43
NELFE-214ENST00000625905 U2SURPO15042 1029 aaKnown RBP12.39□□□□□ -0.43
NELFE-214ENST00000625905 RALBP1Q15311 655 aa12.39□□□□□ -0.43
NELFE-214ENST00000625905 CYP27B1O15528 508 aa12.38□□□□□ -0.43
NELFE-214ENST00000625905 KCNQ2O43526 872 aa12.38□□□□□ -0.43
NELFE-214ENST00000625905 HMOX1P09601 288 aa12.38□□□□□ -0.43
NELFE-214ENST00000625905 PTF1AQ7RTS3 328 aa12.38□□□□□ -0.43
NELFE-214ENST00000625905 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
NELFE-214ENST00000625905 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
NELFE-214ENST00000625905 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
NELFE-214ENST00000625905 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
NELFE-214ENST00000625905 NUDCQ9Y266 331 aa12.37□□□□□ -0.43
NELFE-214ENST00000625905 KAT6BQ8WYB5 2073 aa12.36□□□□□ -0.43
NELFE-214ENST00000625905 PHKG2P15735 406 aa12.36□□□□□ -0.43
NELFE-214ENST00000625905 ZNF530Q6P9A1 599 aaPredicted RBP12.36□□□□□ -0.43
NELFE-214ENST00000625905 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
NELFE-214ENST00000625905 CAMKK2Q96RR4 588 aa12.36□□□□□ -0.43
NELFE-214ENST00000625905 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
NELFE-214ENST00000625905 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
NELFE-214ENST00000625905 C1orf141Q5JVX7 400 aa12.35□□□□□ -0.43
NELFE-214ENST00000625905 ITGB4P16144 1822 aa12.34□□□□□ -0.43
NELFE-214ENST00000625905 PLSCR1O15162 318 aa12.34□□□□□ -0.43
NELFE-214ENST00000625905 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
NELFE-214ENST00000625905 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
NELFE-214ENST00000625905 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
NELFE-214ENST00000625905 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
NELFE-214ENST00000625905 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
NELFE-214ENST00000625905 LY75O60449 1722 aa12.32□□□□□ -0.44
NELFE-214ENST00000625905 PRKAR2BP31323 418 aa12.32□□□□□ -0.44
NELFE-214ENST00000625905 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
NELFE-214ENST00000625905 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
NELFE-214ENST00000625905 PRKRIP1Q9H875 184 aaPredicted RBP12.32□□□□□ -0.44
NELFE-214ENST00000625905 PAPPAQ13219 1627 aa12.32□□□□□ -0.44
NELFE-214ENST00000625905 SCN11AQ9UI33 1791 aa12.31□□□□□ -0.44
NELFE-214ENST00000625905 TXNRD1Q16881 649 aa12.31□□□□□ -0.44
NELFE-214ENST00000625905 RSPH6AQ9H0K4 717 aa12.31□□□□□ -0.44
NELFE-214ENST00000625905 TMOD3Q9NYL9 352 aa12.31□□□□□ -0.44
NELFE-214ENST00000625905 PALLDQ8WX93 1383 aa12.3□□□□□ -0.44
NELFE-214ENST00000625905 MRC1P22897 1456 aa12.3□□□□□ -0.44
NELFE-214ENST00000625905 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
NELFE-214ENST00000625905 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
NELFE-214ENST00000625905 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
NELFE-214ENST00000625905 ADAMTS7Q9UKP4 1686 aa12.29□□□□□ -0.44
NELFE-214ENST00000625905 MTHFSDQ2M296 383 aaKnown RBP12.29□□□□□ -0.44
NELFE-214ENST00000625905 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
NELFE-214ENST00000625905 VIRMAQ69YN4 1812 aaKnown RBP12.29□□□□□ -0.44
NELFE-214ENST00000625905 PSDA5PKW4 1024 aaPredicted RBP12.28□□□□□ -0.44
NELFE-214ENST00000625905 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
NELFE-214ENST00000625905 FCHSD2O94868 740 aa12.28□□□□□ -0.44
NELFE-214ENST00000625905 SLC27A3Q5K4L6 730 aa12.28□□□□□ -0.44
NELFE-214ENST00000625905 PROM2Q8N271 834 aa12.28□□□□□ -0.44
NELFE-214ENST00000625905 PIGBQ92521 554 aa12.28□□□□□ -0.44
NELFE-214ENST00000625905 C5P01031 1676 aa12.28□□□□□ -0.44
NELFE-214ENST00000625905 NEFMP07197 916 aa12.27□□□□□ -0.45
NELFE-214ENST00000625905 CABP4P57796 275 aa12.27□□□□□ -0.45
NELFE-214ENST00000625905 R3HDM1Q15032 1099 aaKnown RBP12.27□□□□□ -0.45
NELFE-214ENST00000625905 SMARCC1Q92922 1105 aaPredicted RBP12.27□□□□□ -0.45
NELFE-214ENST00000625905 ANO8Q9HCE9 1232 aaPredicted RBP12.27□□□□□ -0.45
NELFE-214ENST00000625905 CCNL1Q9UK58 526 aaPredicted RBP12.27□□□□□ -0.45
NELFE-214ENST00000625905 ANP32CO43423 234 aa12.26□□□□□ -0.45
NELFE-214ENST00000625905 STK32BQ9NY57 414 aa12.26□□□□□ -0.45
NELFE-214ENST00000625905 MAPK8IP3Q9UPT6 1336 aa12.26□□□□□ -0.45
NELFE-214ENST00000625905 WDR43Q15061 677 aaKnown RBP eCLIP12.25□□□□□ -0.45
NELFE-214ENST00000625905 PHACTR3Q96KR7 559 aa12.25□□□□□ -0.45
NELFE-214ENST00000625905 GNAT3A8MTJ3 354 aa12.24□□□□□ -0.45
NELFE-214ENST00000625905 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
NELFE-214ENST00000625905 KCNQ4P56696 695 aa12.24□□□□□ -0.45
NELFE-214ENST00000625905 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
NELFE-214ENST00000625905 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
NELFE-214ENST00000625905 ASAP1Q9ULH1 1129 aa12.24□□□□□ -0.45
NELFE-214ENST00000625905 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
NELFE-214ENST00000625905 CASZ1Q86V15 1759 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms