RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PRAM1Q96QH2 718 aa9.21□□□□□ -0.94
TCF4-249ENST00000625716 ORAI2Q96SN7 254 aa9.21□□□□□ -0.94
TCF4-249ENST00000625716 TRAK1Q9UPV9 953 aa9.21□□□□□ -0.94
TCF4-249ENST00000625716 SPATA31A6Q5VVP1 1343 aa9.21□□□□□ -0.94
TCF4-249ENST00000625716 C1orf167Q5SNV9 1468 aa9.21□□□□□ -0.94
TCF4-249ENST00000625716 ASXL1Q8IXJ9 1541 aa9.21□□□□□ -0.94
TCF4-249ENST00000625716 NALCNQ8IZF0 1738 aa9.2□□□□□ -0.94
TCF4-249ENST00000625716 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
TCF4-249ENST00000625716 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
TCF4-249ENST00000625716 NEUROD1Q13562 356 aa9.2□□□□□ -0.94
TCF4-249ENST00000625716 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
TCF4-249ENST00000625716 PLEKHH1Q9ULM0 1364 aa9.2□□□□□ -0.94
TCF4-249ENST00000625716 AHDC1Q5TGY3 1603 aaPredicted RBP9.2□□□□□ -0.94
TCF4-249ENST00000625716 FAM98CQ17RN3 349 aaKnown RBP9.19□□□□□ -0.94
TCF4-249ENST00000625716 DDX17Q92841 729 aaKnown RBP9.19□□□□□ -0.94
TCF4-249ENST00000625716 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
TCF4-249ENST00000625716 CDHR5Q9HBB8 845 aa9.19□□□□□ -0.94
TCF4-249ENST00000625716 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
TCF4-249ENST00000625716 PRSS12P56730 875 aa9.18□□□□□ -0.94
TCF4-249ENST00000625716 COL16A1Q07092 1604 aaPredicted RBP9.18□□□□□ -0.94
TCF4-249ENST00000625716 NPHP3Q7Z494 1330 aa9.18□□□□□ -0.94
TCF4-249ENST00000625716 KNDC1Q76NI1 1749 aa9.17□□□□□ -0.94
TCF4-249ENST00000625716 CDC42BPGQ6DT37 1551 aa9.17□□□□□ -0.94
TCF4-249ENST00000625716 SMAPO00193 183 aa9.17□□□□□ -0.94
TCF4-249ENST00000625716 SOCS7O14512 581 aa9.17□□□□□ -0.94
TCF4-249ENST00000625716 FOXO3O43524 673 aa9.17□□□□□ -0.94
TCF4-249ENST00000625716 SIN3AQ96ST3 1273 aa9.17□□□□□ -0.94
TCF4-249ENST00000625716 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
TCF4-249ENST00000625716 ITGBL1O95965 494 aaPredicted RBP9.16□□□□□ -0.94
TCF4-249ENST00000625716 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
TCF4-249ENST00000625716 L3MBTL2Q969R5 705 aa9.16□□□□□ -0.94
TCF4-249ENST00000625716 NPDC1Q9NQX5 325 aaPredicted RBP9.16□□□□□ -0.94
TCF4-249ENST00000625716 DLC1Q96QB1 1528 aa9.15□□□□□ -0.94
TCF4-249ENST00000625716 SOS2Q07890 1332 aaPredicted RBP9.15□□□□□ -0.94
TCF4-249ENST00000625716 A0A0G2JS52 829 aa9.15□□□□□ -0.94
TCF4-249ENST00000625716 PSME1Q06323 249 aa9.15□□□□□ -0.94
TCF4-249ENST00000625716 ZNF772Q68DY9 489 aaPredicted RBP9.15□□□□□ -0.94
TCF4-249ENST00000625716 HIRIP3Q9BW71 556 aaPredicted RBP9.15□□□□□ -0.94
TCF4-249ENST00000625716 EIF3AQ14152 1382 aaKnown RBP9.14□□□□□ -0.95
TCF4-249ENST00000625716 NHSL1Q5SYE7 1610 aa9.14□□□□□ -0.95
TCF4-249ENST00000625716 XPCQ01831 940 aaPredicted RBP9.14□□□□□ -0.95
TCF4-249ENST00000625716 RGS17Q9UGC6 210 aaPredicted RBP9.14□□□□□ -0.95
TCF4-249ENST00000625716 ADGRB1O14514 1584 aa9.14□□□□□ -0.95
TCF4-249ENST00000625716 SHPRHQ149N8 1683 aa9.13□□□□□ -0.95
TCF4-249ENST00000625716 PNPLA6Q8IY17 1366 aa9.13□□□□□ -0.95
TCF4-249ENST00000625716 WASLO00401 505 aaPredicted RBP9.13□□□□□ -0.95
TCF4-249ENST00000625716 NBPF1Q3BBV0 1214 aa9.13□□□□□ -0.95
TCF4-249ENST00000625716 KRT28Q7Z3Y7 464 aa9.13□□□□□ -0.95
TCF4-249ENST00000625716 KCNV2Q8TDN2 545 aa9.13□□□□□ -0.95
TCF4-249ENST00000625716 C8orf37Q96NL8 207 aa9.13□□□□□ -0.95
TCF4-249ENST00000625716 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.13□□□□□ -0.95
TCF4-249ENST00000625716 ADAMTS2O95450 1211 aa9.12□□□□□ -0.95
TCF4-249ENST00000625716 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
TCF4-249ENST00000625716 HAP1P54257 671 aaPredicted RBP9.12□□□□□ -0.95
TCF4-249ENST00000625716 LMOD2Q6P5Q4 547 aa9.12□□□□□ -0.95
TCF4-249ENST00000625716 POTEAQ6S8J7 498 aa9.12□□□□□ -0.95
TCF4-249ENST00000625716 TTC13Q8NBP0 860 aa9.12□□□□□ -0.95
TCF4-249ENST00000625716 PMFBP1Q8TBY8 1022 aa9.12□□□□□ -0.95
TCF4-249ENST00000625716 NGLY1Q96IV0 654 aa9.12□□□□□ -0.95
TCF4-249ENST00000625716 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
TCF4-249ENST00000625716 HPS5Q9UPZ3 1129 aa9.12□□□□□ -0.95
TCF4-249ENST00000625716 TONSLQ96HA7 1378 aa9.12□□□□□ -0.95
TCF4-249ENST00000625716 FMN2Q9NZ56 1722 aa9.11□□□□□ -0.95
TCF4-249ENST00000625716 NYAP1Q6ZVC0 841 aa9.11□□□□□ -0.95
TCF4-249ENST00000625716 NGDNQ8NEJ9 315 aaKnown RBP9.11□□□□□ -0.95
TCF4-249ENST00000625716 ARHGEF1Q92888 912 aaKnown RBP9.11□□□□□ -0.95
TCF4-249ENST00000625716 TATDN2Q93075 761 aa9.11□□□□□ -0.95
TCF4-249ENST00000625716 LRCH3Q96II8 777 aa9.11□□□□□ -0.95
TCF4-249ENST00000625716 LRP6O75581 1613 aa9.11□□□□□ -0.95
TCF4-249ENST00000625716 ANKARQ7Z5J8 1434 aa9.11□□□□□ -0.95
TCF4-249ENST00000625716 AFF2P51816 1311 aa9.1□□□□□ -0.95
TCF4-249ENST00000625716 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
TCF4-249ENST00000625716 CDK19Q9BWU1 502 aa9.1□□□□□ -0.95
TCF4-249ENST00000625716 KIAA1210Q9ULL0 1709 aa9.1□□□□□ -0.95
TCF4-249ENST00000625716 ROCK2O75116 1388 aaKnown RBP9.1□□□□□ -0.95
TCF4-249ENST00000625716 GPRASP1Q5JY77 1395 aa9.1□□□□□ -0.95
TCF4-249ENST00000625716 KIF1AQ12756 1690 aa9.1□□□□□ -0.95
TCF4-249ENST00000625716 PXDNQ92626 1479 aa9.09□□□□□ -0.95
TCF4-249ENST00000625716 CENPJQ9HC77 1338 aaPredicted RBP9.09□□□□□ -0.95
TCF4-249ENST00000625716 RXRBP28702 533 aa9.09□□□□□ -0.95
TCF4-249ENST00000625716 SRPK2P78362 688 aaKnown RBP9.09□□□□□ -0.95
TCF4-249ENST00000625716 NUDT16Q96DE0 195 aaKnown RBP9.09□□□□□ -0.95
TCF4-249ENST00000625716 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
TCF4-249ENST00000625716 SPATA31A3Q5VYP0 1347 aa9.08□□□□□ -0.96
TCF4-249ENST00000625716 ADGRB2O60241 1585 aa9.08□□□□□ -0.96
TCF4-249ENST00000625716 NUDT18Q6ZVK8 323 aa9.08□□□□□ -0.96
TCF4-249ENST00000625716 QTRT2Q9H974 415 aaKnown RBP9.08□□□□□ -0.96
TCF4-249ENST00000625716 TULP4Q9NRJ4 1543 aa9.07□□□□□ -0.96
TCF4-249ENST00000625716 RGS20O76081 388 aa9.07□□□□□ -0.96
TCF4-249ENST00000625716 PADI6Q6TGC4 694 aa9.07□□□□□ -0.96
TCF4-249ENST00000625716 PCGF6Q9BYE7 350 aa9.07□□□□□ -0.96
TCF4-249ENST00000625716 RBM27Q9P2N5 1060 aaKnown RBP9.07□□□□□ -0.96
TCF4-249ENST00000625716 USP21Q9UK80 565 aa9.07□□□□□ -0.96
TCF4-249ENST00000625716 SBNO1A3KN83 1393 aa9.07□□□□□ -0.96
TCF4-249ENST00000625716 ARHGEF10O15013 1369 aa9.07□□□□□ -0.96
TCF4-249ENST00000625716 PRR36Q9H6K5 1346 aa9.06□□□□□ -0.96
TCF4-249ENST00000625716 TNS3Q68CZ2 1445 aa9.06□□□□□ -0.96
TCF4-249ENST00000625716 ARHGEF28Q8N1W1 1705 aaKnown RBP9.06□□□□□ -0.96
TCF4-249ENST00000625716 CARD11Q9BXL7 1154 aa9.06□□□□□ -0.96
TCF4-249ENST00000625716 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms