RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 RABEP1Q15276 862 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 TERF2Q15554 542 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 PDCD2Q16342 344 aaPredicted RBP6.2□□□□□ -1.42
CHD2-204ENST00000625463 ZFYVE27Q5T4F4 411 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 TMEM92Q6UXU6 159 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 SUGP1Q8IWZ8 645 aaKnown RBP6.2□□□□□ -1.42
CHD2-204ENST00000625463 ANKRD20A12PQ8NF67 263 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 TMC2Q8TDI7 906 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 TNPO1Q92973 898 aaKnown RBP6.2□□□□□ -1.42
CHD2-204ENST00000625463 SPATA32Q96LK8 384 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 ZNF396Q96N95 335 aaPredicted RBP6.2□□□□□ -1.42
CHD2-204ENST00000625463 DCBLD2Q96PD2 775 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 VEZTQ9HBM0 779 aa6.2□□□□□ -1.42
CHD2-204ENST00000625463 UTP6Q9NYH9 597 aaKnown RBP6.2□□□□□ -1.42
CHD2-204ENST00000625463 NOL7Q9UMY1 257 aaKnown RBP6.2□□□□□ -1.42
CHD2-204ENST00000625463 KANK1Q14678 1352 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 DPYSL4O14531 572 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 SH3BP5O60239 455 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 POTEIP0CG38 1075 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 MAP2K2P36507 400 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 MLLT3P42568 568 aaPredicted RBP6.19□□□□□ -1.42
CHD2-204ENST00000625463 FOXK1P85037 733 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 HNRNPUQ00839 825 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHD2-204ENST00000625463 ADCY2Q08462 1091 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 SF3B2Q13435 895 aaKnown RBP6.19□□□□□ -1.42
CHD2-204ENST00000625463 SYCP1Q15431 976 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 MUM1L1Q5H9M0 696 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 MORC1Q86VD1 984 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 NLRP13Q86W25 1043 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 NUTM1Q86Y26 1132 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 RMDN2Q96LZ7 410 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 CEP89Q96ST8 783 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 LZTS2Q9BRK4 669 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 IQCGQ9H095 443 aaKnown RBP6.19□□□□□ -1.42
CHD2-204ENST00000625463 IRF2BPLQ9H1B7 796 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 GOPCQ9HD26 462 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 IRAK4Q9NWZ3 460 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 TBC1D2BQ9UPU7 963 aa6.19□□□□□ -1.42
CHD2-204ENST00000625463 KIF5CO60282 957 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 KINO60870 393 aaKnown RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 STK10O94804 968 aaKnown RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 VDRP11473 427 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 NAT1P18440 290 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 FLT3P36888 993 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 RWDD2BP57060 319 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 RAD51AP2Q09MP3 1159 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 BMS1Q14692 1282 aaKnown RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 FILIP1LQ4L180 1135 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 PLPP6Q8IY26 295 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 SAMD3Q8N6K7 520 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 PNISRQ8TF01 805 aaKnown RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 ZC3H15Q8WU90 426 aaKnown RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 C17orf50Q8WW18 174 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 SYAP1Q96A49 352 aaPredicted RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 AGAP3Q96P47 875 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 KIF2CQ99661 725 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 POLR3CQ9BUI4 534 aaPredicted RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 C22orf23Q9BZE7 217 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 METTL14Q9HCE5 456 aaKnown RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 CPSF2Q9P2I0 782 aaKnown RBP6.18□□□□□ -1.42
CHD2-204ENST00000625463 PNMA2Q9UL42 364 aa6.18□□□□□ -1.42
CHD2-204ENST00000625463 SCAPERQ9BY12 1400 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 DDX11L8A8MPP1 907 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 HMMRO75330 724 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 CDKL5O76039 1030 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 SEC24BO95487 1268 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 SKILP12757 684 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 RASA3Q14644 834 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 SKOR2Q2VWA4 1001 aaPredicted RBP6.17□□□□□ -1.42
CHD2-204ENST00000625463 TTC31Q49AM3 519 aaPredicted RBP6.17□□□□□ -1.42
CHD2-204ENST00000625463 MCTP2Q6DN12 878 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 TTLL5Q6EMB2 1281 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 CLEC4GQ6UXB4 293 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 EFCAB13Q8IY85 973 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 DRC1Q96MC2 740 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 SH3GL3Q99963 347 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 RMI1Q9H9A7 625 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 MORC2Q9Y6X9 1032 aaPredicted RBP6.17□□□□□ -1.42
CHD2-204ENST00000625463 RNF123Q5XPI4 1314 aa6.17□□□□□ -1.42
CHD2-204ENST00000625463 ZC3H4Q9UPT8 1303 aaKnown RBP6.17□□□□□ -1.42
CHD2-204ENST00000625463 ANKRD62A6NC57 917 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 G3V3G9 751 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 HTATSF1O43719 755 aaKnown RBP6.16□□□□□ -1.42
CHD2-204ENST00000625463 CAND2O75155 1236 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 MFSD4BQ5TF39 518 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 TRIM74Q86UV6 250 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 TRIM73Q86UV7 250 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 TAX1BP1Q86VP1 789 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 RPUSD2Q8IZ73 545 aaKnown RBP6.16□□□□□ -1.42
CHD2-204ENST00000625463 ZNF710Q8N1W2 664 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 TXLNBQ8N3L3 684 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 TATDN2Q93075 761 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 MMTAG2Q9BU76 263 aaKnown RBP6.16□□□□□ -1.42
CHD2-204ENST00000625463 TOMM22Q9NS69 142 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 TPX2Q9ULW0 747 aaKnown RBP6.16□□□□□ -1.42
CHD2-204ENST00000625463 ZNF232Q9UNY5 417 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 ZKSCAN5Q9Y2L8 839 aa6.16□□□□□ -1.42
CHD2-204ENST00000625463 CREB3O43889 395 aa6.15□□□□□ -1.42
CHD2-204ENST00000625463 BAG4O95429 457 aaKnown RBP6.15□□□□□ -1.42
CHD2-204ENST00000625463 TPM1P09493 284 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms