RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
PMS1-221ENST00000624204 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
PMS1-221ENST00000624204 MED14O60244 1454 aa18.34■□□□□ 0.53
PMS1-221ENST00000624204 ADGRB2O60241 1585 aa18.33■□□□□ 0.53
PMS1-221ENST00000624204 TWISTNBQ3B726 338 aaPredicted RBP18.33■□□□□ 0.53
PMS1-221ENST00000624204 RILPL2Q969X0 211 aa18.33■□□□□ 0.53
PMS1-221ENST00000624204 ABCA6Q8N139 1617 aa18.33■□□□□ 0.53
PMS1-221ENST00000624204 DCTN1Q14203 1278 aa18.33■□□□□ 0.52
PMS1-221ENST00000624204 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
PMS1-221ENST00000624204 CDK11BP21127 795 aaKnown RBP18.33■□□□□ 0.52
PMS1-221ENST00000624204 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
PMS1-221ENST00000624204 SPTLC3Q9NUV7 552 aa18.33■□□□□ 0.52
PMS1-221ENST00000624204 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
PMS1-221ENST00000624204 TRIM6-TRIM34B2RNG4 842 aa18.32■□□□□ 0.52
PMS1-221ENST00000624204 API5Q9BZZ5 524 aaKnown RBP18.32■□□□□ 0.52
PMS1-221ENST00000624204 CCDC183Q5T5S1 534 aa18.32■□□□□ 0.52
PMS1-221ENST00000624204 DRC7Q8IY82 874 aa18.32■□□□□ 0.52
PMS1-221ENST00000624204 ANO2Q9NQ90 1003 aa18.32■□□□□ 0.52
PMS1-221ENST00000624204 ABCC4O15439 1325 aa18.31■□□□□ 0.52
PMS1-221ENST00000624204 FIBPO43427 364 aa18.31■□□□□ 0.52
PMS1-221ENST00000624204 ANKRD36BQ8N2N9 1353 aa18.31■□□□□ 0.52
PMS1-221ENST00000624204 ERICH4A6NGS2 130 aa18.31■□□□□ 0.52
PMS1-221ENST00000624204 KDM4AO75164 1064 aa18.3■□□□□ 0.52
PMS1-221ENST00000624204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.3■□□□□ 0.52
PMS1-221ENST00000624204 GIMAP6Q6P9H5 292 aa18.3■□□□□ 0.52
PMS1-221ENST00000624204 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
PMS1-221ENST00000624204 KIAA1524Q8TCG1 905 aa18.3■□□□□ 0.52
PMS1-221ENST00000624204 ZBTB9Q96C00 473 aa18.3■□□□□ 0.52
PMS1-221ENST00000624204 PALD1Q9ULE6 856 aa18.3■□□□□ 0.52
PMS1-221ENST00000624204 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
PMS1-221ENST00000624204 SOX12O15370 315 aa18.29■□□□□ 0.52
PMS1-221ENST00000624204 DDX54Q8TDD1 881 aaKnown RBP18.29■□□□□ 0.52
PMS1-221ENST00000624204 MBIPQ9NS73 344 aa18.29■□□□□ 0.52
PMS1-221ENST00000624204 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.29■□□□□ 0.52
PMS1-221ENST00000624204 V9GYY5 206 aaPredicted RBP18.29■□□□□ 0.52
PMS1-221ENST00000624204 MCCP23508 829 aa18.29■□□□□ 0.52
PMS1-221ENST00000624204 NAA30Q147X3 362 aaPredicted RBP18.29■□□□□ 0.52
PMS1-221ENST00000624204 C8orf58Q8NAV2 365 aa18.29■□□□□ 0.52
PMS1-221ENST00000624204 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
PMS1-221ENST00000624204 NSD2O96028 1365 aa18.29■□□□□ 0.52
PMS1-221ENST00000624204 MCM2P49736 904 aa18.28■□□□□ 0.52
PMS1-221ENST00000624204 BRPF1P55201 1214 aaPredicted RBP18.28■□□□□ 0.52
PMS1-221ENST00000624204 TMEM51Q9NW97 253 aa18.28■□□□□ 0.52
PMS1-221ENST00000624204 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
PMS1-221ENST00000624204 KRT24Q2M2I5 525 aa18.28■□□□□ 0.52
PMS1-221ENST00000624204 GNAI1P63096 354 aa18.27■□□□□ 0.52
PMS1-221ENST00000624204 C16orf45Q96MC5 204 aaPredicted RBP18.27■□□□□ 0.52
PMS1-221ENST00000624204 KCNF1Q9H3M0 494 aa18.27■□□□□ 0.52
PMS1-221ENST00000624204 NAP1L2Q9ULW6 460 aaPredicted RBP18.27■□□□□ 0.52
PMS1-221ENST00000624204 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
PMS1-221ENST00000624204 MX1P20591 662 aa18.27■□□□□ 0.52
PMS1-221ENST00000624204 ANKRD7Q92527 254 aa18.27■□□□□ 0.52
PMS1-221ENST00000624204 FAM83GA6ND36 823 aa18.27■□□□□ 0.51
PMS1-221ENST00000624204 ANKRD44Q8N8A2 993 aa18.27■□□□□ 0.51
PMS1-221ENST00000624204 SRCIN1Q9C0H9 1055 aa18.26■□□□□ 0.51
PMS1-221ENST00000624204 PTCH1Q13635 1447 aa18.26■□□□□ 0.51
PMS1-221ENST00000624204 FYB1O15117 783 aa18.26■□□□□ 0.51
PMS1-221ENST00000624204 FCHSD2O94868 740 aa18.26■□□□□ 0.51
PMS1-221ENST00000624204 OGFRQ9NZT2 677 aa18.26■□□□□ 0.51
PMS1-221ENST00000624204 FEZ1Q99689 392 aa18.26■□□□□ 0.51
PMS1-221ENST00000624204 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
PMS1-221ENST00000624204 GOLGA6L6A8MZA4 724 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 TAF3Q5VWG9 929 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 IFT57Q9NWB7 429 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 KIAA1210Q9ULL0 1709 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 A0A1W2PP64 1363 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 PIK3R4Q99570 1358 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 CUL4AQ13619 759 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 NECTIN2Q92692 538 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 CHMP4AQ9BY43 222 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 MYOM2P54296 1465 aa18.25■□□□□ 0.51
PMS1-221ENST00000624204 NCBP1Q09161 790 aaKnown RBP18.24■□□□□ 0.51
PMS1-221ENST00000624204 CEP85Q6P2H3 762 aa18.24■□□□□ 0.51
PMS1-221ENST00000624204 AP5Z1O43299 807 aa18.24■□□□□ 0.51
PMS1-221ENST00000624204 KCNJ4P48050 445 aa18.24■□□□□ 0.51
PMS1-221ENST00000624204 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
PMS1-221ENST00000624204 PTGS1P23219 599 aa18.24■□□□□ 0.51
PMS1-221ENST00000624204 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
PMS1-221ENST00000624204 INTS4Q96HW7 963 aaKnown RBP18.23■□□□□ 0.51
PMS1-221ENST00000624204 CAMK4Q16566 473 aa18.23■□□□□ 0.51
PMS1-221ENST00000624204 GGT6Q6P531 493 aa18.23■□□□□ 0.51
PMS1-221ENST00000624204 RPAP2Q8IXW5 612 aaPredicted RBP18.23■□□□□ 0.51
PMS1-221ENST00000624204 MEIS3Q99687 375 aa18.23■□□□□ 0.51
PMS1-221ENST00000624204 EXOC6BQ9Y2D4 811 aa18.22■□□□□ 0.51
PMS1-221ENST00000624204 PDE1AP54750 535 aa18.22■□□□□ 0.51
PMS1-221ENST00000624204 FBXW7Q969H0 707 aa18.21■□□□□ 0.51
PMS1-221ENST00000624204 CTIFO43310 598 aaKnown RBP18.21■□□□□ 0.51
PMS1-221ENST00000624204 ESYT1Q9BSJ8 1104 aa18.21■□□□□ 0.51
PMS1-221ENST00000624204 UBE2HP62256 183 aa18.21■□□□□ 0.51
PMS1-221ENST00000624204 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
PMS1-221ENST00000624204 TAOK2Q9UL54 1235 aa18.2■□□□□ 0.5
PMS1-221ENST00000624204 LRMPQ12912 555 aa18.2■□□□□ 0.5
PMS1-221ENST00000624204 REREQ9P2R6 1566 aa18.2■□□□□ 0.5
PMS1-221ENST00000624204 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.2■□□□□ 0.5
PMS1-221ENST00000624204 CTNNA3Q9UI47 895 aa18.2■□□□□ 0.5
PMS1-221ENST00000624204 TPM3P06753 285 aa18.19■□□□□ 0.5
PMS1-221ENST00000624204 MIS18AQ9NYP9 233 aa18.19■□□□□ 0.5
PMS1-221ENST00000624204 TNNT1P13805 278 aa18.19■□□□□ 0.5
PMS1-221ENST00000624204 PPRC1Q5VV67 1664 aaKnown RBP18.19■□□□□ 0.5
PMS1-221ENST00000624204 CCDC186Q7Z3E2 898 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms