RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 RRBP1Q9P2E9 1410 aaKnown RBP16.86■□□□□ 0.29
CDH23-214ENST00000622827 PDIA4P13667 645 aaKnown RBP16.86■□□□□ 0.29
CDH23-214ENST00000622827 GIGYF2Q6Y7W6 1299 aaKnown RBP16.86■□□□□ 0.29
CDH23-214ENST00000622827 CASTP20810 708 aaKnown RBP16.86■□□□□ 0.29
CDH23-214ENST00000622827 SRCIN1Q9C0H9 1055 aa16.86■□□□□ 0.29
CDH23-214ENST00000622827 SPDYE4A6NLX3 237 aa16.85■□□□□ 0.29
CDH23-214ENST00000622827 GSTTP1A0A1W2PQM5 241 aa16.85■□□□□ 0.29
CDH23-214ENST00000622827 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
CDH23-214ENST00000622827 IRX3P78415 501 aaPredicted RBP16.85■□□□□ 0.29
CDH23-214ENST00000622827 CCDC178Q5BJE1 867 aa16.85■□□□□ 0.29
CDH23-214ENST00000622827 PLEKHH1Q9ULM0 1364 aa16.85■□□□□ 0.29
CDH23-214ENST00000622827 MCM5P33992 734 aa16.85■□□□□ 0.29
CDH23-214ENST00000622827 ANAPC15P60006 121 aa16.85■□□□□ 0.29
CDH23-214ENST00000622827 SPECC1LQ69YQ0 1117 aa16.85■□□□□ 0.29
CDH23-214ENST00000622827 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
CDH23-214ENST00000622827 PPM1EQ8WY54 764 aa16.84■□□□□ 0.29
CDH23-214ENST00000622827 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
CDH23-214ENST00000622827 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
CDH23-214ENST00000622827 DNAAF4Q8WXU2 420 aa16.84■□□□□ 0.29
CDH23-214ENST00000622827 ZSCAN31Q96LW9 406 aaPredicted RBP16.84■□□□□ 0.29
CDH23-214ENST00000622827 TOP1P11387 765 aaKnown RBP16.84■□□□□ 0.29
CDH23-214ENST00000622827 BLOC1S2Q6QNY1 142 aa16.83■□□□□ 0.29
CDH23-214ENST00000622827 VPS36Q86VN1 386 aa16.83■□□□□ 0.29
CDH23-214ENST00000622827 CHD1LQ86WJ1 897 aa16.83■□□□□ 0.29
CDH23-214ENST00000622827 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.29
CDH23-214ENST00000622827 GNL3LQ9NVN8 582 aaKnown RBP16.83■□□□□ 0.29
CDH23-214ENST00000622827 MAP4K4O95819 1239 aaPredicted RBP16.83■□□□□ 0.29
CDH23-214ENST00000622827 BMP2KQ9NSY1 1161 aaPredicted RBP16.83■□□□□ 0.28
CDH23-214ENST00000622827 JAKMIP1Q96N16 626 aaKnown RBP16.83■□□□□ 0.28
CDH23-214ENST00000622827 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
CDH23-214ENST00000622827 SSBP05455 408 aaKnown RBP eCLIP16.83■□□□□ 0.28
CDH23-214ENST00000622827 KIF4BQ2VIQ3 1234 aa16.83■□□□□ 0.28
CDH23-214ENST00000622827 KRT222Q8N1A0 295 aa16.83■□□□□ 0.28
CDH23-214ENST00000622827 POTEJP0CG39 1038 aa16.83■□□□□ 0.28
CDH23-214ENST00000622827 CCDC83Q8IWF9 413 aa16.83■□□□□ 0.28
CDH23-214ENST00000622827 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
CDH23-214ENST00000622827 NEMFO60524 1076 aa16.82■□□□□ 0.28
CDH23-214ENST00000622827 NBPF1Q3BBV0 1214 aa16.82■□□□□ 0.28
CDH23-214ENST00000622827 CETN2P41208 172 aa16.82■□□□□ 0.28
CDH23-214ENST00000622827 ATP2B2Q01814 1243 aa16.82■□□□□ 0.28
CDH23-214ENST00000622827 CCT4P50991 539 aaKnown RBP16.82■□□□□ 0.28
CDH23-214ENST00000622827 PSME1Q06323 249 aa16.82■□□□□ 0.28
CDH23-214ENST00000622827 NUP133Q8WUM0 1156 aa16.82■□□□□ 0.28
CDH23-214ENST00000622827 MYH10P35580 1976 aa16.82■□□□□ 0.28
CDH23-214ENST00000622827 CEP131Q9UPN4 1083 aa16.82■□□□□ 0.28
CDH23-214ENST00000622827 PPP1R12BO60237 982 aaPredicted RBP16.82■□□□□ 0.28
CDH23-214ENST00000622827 HOOK3Q86VS8 718 aa16.81■□□□□ 0.28
CDH23-214ENST00000622827 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
CDH23-214ENST00000622827 ALS2CR12Q96Q35 445 aa16.81■□□□□ 0.28
CDH23-214ENST00000622827 KIF6Q6ZMV9 814 aa16.81■□□□□ 0.28
CDH23-214ENST00000622827 CEP112Q8N8E3 955 aa16.81■□□□□ 0.28
CDH23-214ENST00000622827 MATR3P43243 847 aaKnown RBP eCLIP16.81■□□□□ 0.28
CDH23-214ENST00000622827 NUP88Q99567 741 aaPredicted RBP16.81■□□□□ 0.28
CDH23-214ENST00000622827 FEZ1Q99689 392 aa16.81■□□□□ 0.28
CDH23-214ENST00000622827 IVLP07476 585 aa16.8■□□□□ 0.28
CDH23-214ENST00000622827 CFAP57Q96MR6 1250 aa16.8■□□□□ 0.28
CDH23-214ENST00000622827 WASF1Q92558 559 aa16.8■□□□□ 0.28
CDH23-214ENST00000622827 HSPA4P34932 840 aa16.8■□□□□ 0.28
CDH23-214ENST00000622827 ANO10Q9NW15 660 aa16.8■□□□□ 0.28
CDH23-214ENST00000622827 CCDC57Q2TAC2 916 aa16.8■□□□□ 0.28
CDH23-214ENST00000622827 GSDMDP57764 484 aa16.8■□□□□ 0.28
CDH23-214ENST00000622827 KRT32Q14532 448 aa16.8■□□□□ 0.28
CDH23-214ENST00000622827 TRMT1Q9NXH9 659 aaKnown RBP16.8■□□□□ 0.28
CDH23-214ENST00000622827 BBXQ8WY36 941 aaPredicted RBP16.79■□□□□ 0.28
CDH23-214ENST00000622827 MAATS1Q7Z4T9 603 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 PLEKHH2Q8IVE3 1493 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 NEBLO76041 1014 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 STX1AQ16623 288 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 FKBP15Q5T1M5 1219 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 FYCO1Q9BQS8 1478 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 TCP11L2Q8N4U5 519 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 MVPQ14764 893 aaKnown RBP16.79■□□□□ 0.28
CDH23-214ENST00000622827 KLHL10Q6JEL2 608 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
CDH23-214ENST00000622827 CCDC158Q5M9N0 1113 aa16.78■□□□□ 0.28
CDH23-214ENST00000622827 HLTFQ14527 1009 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDH23-214ENST00000622827 CCDC97Q96F63 343 aaPredicted RBP16.78■□□□□ 0.28
CDH23-214ENST00000622827 MYOM3Q5VTT5 1437 aa16.78■□□□□ 0.28
CDH23-214ENST00000622827 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
CDH23-214ENST00000622827 SNW1Q13573 536 aaKnown RBP16.78■□□□□ 0.28
CDH23-214ENST00000622827 C6orf163Q5TEZ5 329 aa16.78■□□□□ 0.28
CDH23-214ENST00000622827 CEP135Q66GS9 1140 aa16.78■□□□□ 0.28
CDH23-214ENST00000622827 PRIMPOLQ96LW4 560 aa16.78■□□□□ 0.28
CDH23-214ENST00000622827 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
CDH23-214ENST00000622827 DNA2P51530 1060 aa16.78■□□□□ 0.28
CDH23-214ENST00000622827 CTNNBL1Q8WYA6 563 aaPredicted RBP16.78■□□□□ 0.28
CDH23-214ENST00000622827 CWC27Q6UX04 472 aaKnown RBP16.77■□□□□ 0.28
CDH23-214ENST00000622827 AACSQ86V21 672 aa16.77■□□□□ 0.28
CDH23-214ENST00000622827 PAXBP1Q9Y5B6 917 aa16.77■□□□□ 0.28
CDH23-214ENST00000622827 NAA15Q9BXJ9 866 aaKnown RBP16.77■□□□□ 0.28
CDH23-214ENST00000622827 SCAND2PQ9GZW5 306 aaPredicted RBP16.77■□□□□ 0.28
CDH23-214ENST00000622827 FGD6Q6ZV73 1430 aa16.77■□□□□ 0.27
CDH23-214ENST00000622827 ANKS4BQ8N8V4 417 aa16.77■□□□□ 0.27
CDH23-214ENST00000622827 UBAC1Q9BSL1 405 aa16.77■□□□□ 0.27
CDH23-214ENST00000622827 BMS1Q14692 1282 aaKnown RBP16.77■□□□□ 0.27
CDH23-214ENST00000622827 ANKRD18BA2A2Z9 1011 aa16.76■□□□□ 0.27
CDH23-214ENST00000622827 PAFAH1B1P43034 410 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms