RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16■□□□□ 0.152e-7■■■■□ 20.7
CHD1L-210ENST00000622533 MBIPQ9NS73 344 aa16■□□□□ 0.15
CHD1L-210ENST00000622533 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
CHD1L-210ENST00000622533 IL13P35225 146 aa16■□□□□ 0.15
CHD1L-210ENST00000622533 PHACTR3Q96KR7 559 aa16■□□□□ 0.15
CHD1L-210ENST00000622533 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
CHD1L-210ENST00000622533 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
CHD1L-210ENST00000622533 MPNDQ8N594 471 aa15.99■□□□□ 0.15
CHD1L-210ENST00000622533 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
CHD1L-210ENST00000622533 YEATS2Q9ULM3 1422 aa15.99■□□□□ 0.15
CHD1L-210ENST00000622533 HMOX1P09601 288 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 RABEP1Q15276 862 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 CSPP1Q1MSJ5 1256 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 GPT2Q8TD30 523 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 C1orf115Q9H7X2 142 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
CHD1L-210ENST00000622533 SIRT2Q8IXJ6 389 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 TSPYL6Q8N831 410 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
CHD1L-210ENST00000622533 MTERF4Q7Z6M4 381 aaKnown RBP15.98■□□□□ 0.15
CHD1L-210ENST00000622533 SYCE3A1L190 88 aa15.97■□□□□ 0.15
CHD1L-210ENST00000622533 RIMS2Q9UQ26 1411 aa15.97■□□□□ 0.15
CHD1L-210ENST00000622533 CCDC94Q9BW85 323 aaPredicted RBP15.97■□□□□ 0.15
CHD1L-210ENST00000622533 FOXD4L5Q5VV16 416 aaPredicted RBP15.96■□□□□ 0.15
CHD1L-210ENST00000622533 FOXD4L4Q8WXT5 416 aaPredicted RBP15.96■□□□□ 0.15
CHD1L-210ENST00000622533 DCTPP1Q9H773 170 aa15.96■□□□□ 0.15
CHD1L-210ENST00000622533 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
CHD1L-210ENST00000622533 FAM177BA6PVY3 158 aa15.96■□□□□ 0.15
CHD1L-210ENST00000622533 ZSCAN20P17040 1043 aaPredicted RBP15.95■□□□□ 0.14
CHD1L-210ENST00000622533 DMTNQ08495 405 aa15.95■□□□□ 0.14
CHD1L-210ENST00000622533 THUMPD2Q9BTF0 503 aaKnown RBP15.95■□□□□ 0.14
CHD1L-210ENST00000622533 CBX1P83916 185 aa15.95■□□□□ 0.14
CHD1L-210ENST00000622533 DNTTIP2Q5QJE6 756 aaKnown RBP15.95■□□□□ 0.14
CHD1L-210ENST00000622533 CASC1Q6TDU7 716 aa15.95■□□□□ 0.14
CHD1L-210ENST00000622533 TMEM63CQ9P1W3 806 aa15.95■□□□□ 0.14
CHD1L-210ENST00000622533 NUCB2P80303 420 aa15.95■□□□□ 0.14
CHD1L-210ENST00000622533 INTS3Q68E01 1043 aaKnown RBP15.95■□□□□ 0.14
CHD1L-210ENST00000622533 PLEKHM2Q8IWE5 1019 aa15.95■□□□□ 0.14
CHD1L-210ENST00000622533 CCDC39Q9UFE4 941 aa15.95■□□□□ 0.14
CHD1L-210ENST00000622533 EMILIN1Q9Y6C2 1016 aa15.95■□□□□ 0.14
CHD1L-210ENST00000622533 RPAP2Q8IXW5 612 aaPredicted RBP15.94■□□□□ 0.14
CHD1L-210ENST00000622533 ZGPATQ8N5A5 531 aaKnown RBP15.94■□□□□ 0.14
CHD1L-210ENST00000622533 COG3Q96JB2 828 aa15.94■□□□□ 0.14
CHD1L-210ENST00000622533 PTMAP06454 111 aaKnown RBP15.94■□□□□ 0.14
CHD1L-210ENST00000622533 TTC22Q5TAA0 569 aa15.94■□□□□ 0.14
CHD1L-210ENST00000622533 C8orf58Q8NAV2 365 aa15.93■□□□□ 0.14
CHD1L-210ENST00000622533 RIMBP3CA6NJZ7 1639 aa15.93■□□□□ 0.14
CHD1L-210ENST00000622533 RIMBP3BA6NNM3 1639 aa15.93■□□□□ 0.14
CHD1L-210ENST00000622533 RIMBP3Q9UFD9 1639 aa15.93■□□□□ 0.14
CHD1L-210ENST00000622533 WASLO00401 505 aaPredicted RBP15.93■□□□□ 0.14
CHD1L-210ENST00000622533 DLG5Q8TDM6 1919 aa15.93■□□□□ 0.14
CHD1L-210ENST00000622533 ELL2O00472 640 aaPredicted RBP15.92■□□□□ 0.14
CHD1L-210ENST00000622533 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
CHD1L-210ENST00000622533 ANKRD44Q8N8A2 993 aa15.92■□□□□ 0.14
CHD1L-210ENST00000622533 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
CHD1L-210ENST00000622533 SETD1AO15047 1707 aaKnown RBP15.92■□□□□ 0.14
CHD1L-210ENST00000622533 CYP2E1P05181 493 aaPredicted RBP15.92■□□□□ 0.14
CHD1L-210ENST00000622533 GSPT1P15170 499 aaKnown RBP15.92■□□□□ 0.14
CHD1L-210ENST00000622533 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
CHD1L-210ENST00000622533 LRSAM1Q6UWE0 723 aa15.92■□□□□ 0.14
CHD1L-210ENST00000622533 A2ML1A8K2U0 1454 aa15.92■□□□□ 0.14
CHD1L-210ENST00000622533 FGD1P98174 961 aa15.91■□□□□ 0.14
CHD1L-210ENST00000622533 MCM5P33992 734 aa15.91■□□□□ 0.14
CHD1L-210ENST00000622533 WAPLQ7Z5K2 1190 aa15.91■□□□□ 0.14
CHD1L-210ENST00000622533 ZNF710Q8N1W2 664 aa15.91■□□□□ 0.14
CHD1L-210ENST00000622533 ZNF830Q96NB3 372 aaPredicted RBP15.91■□□□□ 0.14
CHD1L-210ENST00000622533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHD1L-210ENST00000622533 PTPRCP08575 1304 aa15.91■□□□□ 0.14
CHD1L-210ENST00000622533 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
CHD1L-210ENST00000622533 FBLN1P23142 703 aa15.9■□□□□ 0.14
CHD1L-210ENST00000622533 SIRT1Q96EB6 747 aa15.9■□□□□ 0.14
CHD1L-210ENST00000622533 ZDHHC9Q9Y397 364 aa15.9■□□□□ 0.14
CHD1L-210ENST00000622533 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
CHD1L-210ENST00000622533 UTP14CQ5TAP6 766 aaKnown RBP15.9■□□□□ 0.14
CHD1L-210ENST00000622533 NME9Q86XW9 330 aa15.9■□□□□ 0.14
CHD1L-210ENST00000622533 USP26Q9BXU7 913 aa15.9■□□□□ 0.14
CHD1L-210ENST00000622533 KNDC1Q76NI1 1749 aa15.89■□□□□ 0.13
CHD1L-210ENST00000622533 SPATA31D1Q6ZQQ2 1576 aa15.89■□□□□ 0.13
CHD1L-210ENST00000622533 C17orf53Q8N3J3 647 aaPredicted RBP15.89■□□□□ 0.13
CHD1L-210ENST00000622533 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHD1L-210ENST00000622533 AGLP35573 1532 aa15.89■□□□□ 0.13
CHD1L-210ENST00000622533 ST18O60284 1047 aa15.89■□□□□ 0.13
CHD1L-210ENST00000622533 KIAA2012Q0VF49 1180 aa15.89■□□□□ 0.13
CHD1L-210ENST00000622533 MYRIPQ8NFW9 859 aa15.89■□□□□ 0.13
CHD1L-210ENST00000622533 NRKQ7Z2Y5 1582 aa15.89■□□□□ 0.13
CHD1L-210ENST00000622533 REC8O95072 547 aa15.88■□□□□ 0.13
CHD1L-210ENST00000622533 ATP2B3Q16720 1220 aa15.88■□□□□ 0.13
CHD1L-210ENST00000622533 CCDC61Q9Y6R9 512 aa15.88■□□□□ 0.13
CHD1L-210ENST00000622533 ATP10DQ9P241 1426 aa15.88■□□□□ 0.13
CHD1L-210ENST00000622533 NUDT16Q96DE0 195 aaKnown RBP15.87■□□□□ 0.13
CHD1L-210ENST00000622533 HMMRO75330 724 aa15.87■□□□□ 0.13
CHD1L-210ENST00000622533 PPP4R3BQ5MIZ7 849 aa15.87■□□□□ 0.13
CHD1L-210ENST00000622533 C3P01024 1663 aa15.86■□□□□ 0.13
CHD1L-210ENST00000622533 CEP85Q6P2H3 762 aa15.86■□□□□ 0.13
CHD1L-210ENST00000622533 AKAP12Q02952 1782 aa15.86■□□□□ 0.13
CHD1L-210ENST00000622533 SPDYE4A6NLX3 237 aa15.86■□□□□ 0.13
CHD1L-210ENST00000622533 ITSN1Q15811 1721 aa15.85■□□□□ 0.13
CHD1L-210ENST00000622533 CHL1O00533 1208 aa15.85■□□□□ 0.13
CHD1L-210ENST00000622533 IGSF3O75054 1194 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms