RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 KIAA1328Q86T90 577 aa11.64□□□□□ -0.55
COL4A6-210ENST00000621266 CCDC148Q8NFR7 591 aa11.64□□□□□ -0.55
COL4A6-210ENST00000621266 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
COL4A6-210ENST00000621266 CD109Q6YHK3 1445 aa11.64□□□□□ -0.55
COL4A6-210ENST00000621266 PDCP20941 246 aa11.64□□□□□ -0.55
COL4A6-210ENST00000621266 MCM2P49736 904 aa11.64□□□□□ -0.55
COL4A6-210ENST00000621266 FSD1Q9BTV5 496 aa11.64□□□□□ -0.55
COL4A6-210ENST00000621266 URI1O94763 535 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-210ENST00000621266 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-210ENST00000621266 ZC3H6P61129 1189 aaKnown RBP11.63□□□□□ -0.55
COL4A6-210ENST00000621266 DNAAF4Q8WXU2 420 aa11.63□□□□□ -0.55
COL4A6-210ENST00000621266 CAMK4Q16566 473 aa11.63□□□□□ -0.55
COL4A6-210ENST00000621266 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-210ENST00000621266 UBAP1LF5GYI3 381 aa11.63□□□□□ -0.55
COL4A6-210ENST00000621266 GBP3Q9H0R5 595 aa11.63□□□□□ -0.55
COL4A6-210ENST00000621266 LUC7LQ9NQ29 371 aaKnown RBP11.63□□□□□ -0.55
COL4A6-210ENST00000621266 SEPT11Q9NVA2 429 aaKnown RBP11.63□□□□□ -0.55
COL4A6-210ENST00000621266 HECW1Q76N89 1606 aa11.63□□□□□ -0.55
COL4A6-210ENST00000621266 WDR33Q9C0J8 1336 aaKnown RBP11.63□□□□□ -0.55
COL4A6-210ENST00000621266 MICALCLQ6ZW33 695 aa11.63□□□□□ -0.55
COL4A6-210ENST00000621266 NUP62CLQ9H1M0 184 aa11.63□□□□□ -0.55
COL4A6-210ENST00000621266 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
COL4A6-210ENST00000621266 EPB41L2O43491 1005 aaKnown RBP11.62□□□□□ -0.55
COL4A6-210ENST00000621266 CABP4P57796 275 aa11.62□□□□□ -0.55
COL4A6-210ENST00000621266 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
COL4A6-210ENST00000621266 C1orf115Q9H7X2 142 aa11.62□□□□□ -0.55
COL4A6-210ENST00000621266 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
COL4A6-210ENST00000621266 TXLNAP40222 546 aa11.62□□□□□ -0.55
COL4A6-210ENST00000621266 ARHGAP29Q52LW3 1261 aa11.62□□□□□ -0.55
COL4A6-210ENST00000621266 UPF3BQ9BZI7 483 aaKnown RBP11.62□□□□□ -0.55
COL4A6-210ENST00000621266 KRT18P05783 430 aaKnown RBP11.62□□□□□ -0.55
COL4A6-210ENST00000621266 PRDM11Q9NQV5 511 aa11.62□□□□□ -0.55
COL4A6-210ENST00000621266 TATP17735 454 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-210ENST00000621266 KRT85P78386 507 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 KIAA1107Q9UPP5 1409 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 PAF1Q8N7H5 531 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 FAM107BQ9H098 131 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 CLGNO14967 610 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 KIF18AQ8NI77 898 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 JAKMIP3Q5VZ66 844 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 C16orf45Q96MC5 204 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-210ENST00000621266 SLC52A1Q9NWF4 448 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 TRMT1Q9NXH9 659 aaKnown RBP11.61□□□□□ -0.55
COL4A6-210ENST00000621266 CDCA7LQ96GN5 454 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 SPATA32Q96LK8 384 aa11.61□□□□□ -0.55
COL4A6-210ENST00000621266 HSP90AB4PQ58FF6 505 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 CCDC91Q7Z6B0 441 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 BRD4O60885 1362 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-210ENST00000621266 UBE4AQ14139 1066 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 RAI14Q9P0K7 980 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 MAP9Q49MG5 647 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 TXLNBQ8N3L3 684 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 GOPCQ9HD26 462 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 TAF4BQ92750 862 aa11.6□□□□□ -0.55
COL4A6-210ENST00000621266 MTHFSP49914 203 aa11.59□□□□□ -0.55
COL4A6-210ENST00000621266 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL4A6-210ENST00000621266 CFAP100Q494V2 611 aa11.59□□□□□ -0.55
COL4A6-210ENST00000621266 ZHX3Q9H4I2 956 aa11.59□□□□□ -0.55
COL4A6-210ENST00000621266 ATP2C2O75185 946 aa11.59□□□□□ -0.55
COL4A6-210ENST00000621266 LARP1BQ659C4 914 aaKnown RBP11.59□□□□□ -0.55
COL4A6-210ENST00000621266 WASHC2AQ641Q2 1341 aa11.59□□□□□ -0.55
COL4A6-210ENST00000621266 LAMC3Q9Y6N6 1575 aa11.59□□□□□ -0.55
COL4A6-210ENST00000621266 MAP4K4O95819 1239 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-210ENST00000621266 TMEM132AQ24JP5 1023 aa11.59□□□□□ -0.55
COL4A6-210ENST00000621266 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-210ENST00000621266 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-210ENST00000621266 STIM1Q13586 685 aa11.58□□□□□ -0.56
COL4A6-210ENST00000621266 IFFO1Q0D2I5 559 aa11.58□□□□□ -0.56
COL4A6-210ENST00000621266 AKNAQ7Z591 1439 aa11.58□□□□□ -0.56
COL4A6-210ENST00000621266 UBTFL1P0CB47 393 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-210ENST00000621266 JMYQ8N9B5 988 aa11.58□□□□□ -0.56
COL4A6-210ENST00000621266 KIF4BQ2VIQ3 1234 aa11.58□□□□□ -0.56
COL4A6-210ENST00000621266 NBPF1Q3BBV0 1214 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 CTR9Q6PD62 1173 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 CYP46A1Q9Y6A2 500 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 MAP3K11Q16584 847 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 SMTNL1A8MU46 457 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 ABCA10Q8WWZ4 1543 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 KIF2AO00139 706 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-210ENST00000621266 DNA2P51530 1060 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 AAMPQ13685 434 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 DAPK1P53355 1430 aa11.57□□□□□ -0.56
COL4A6-210ENST00000621266 DYNC1I1O14576 645 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 KIF5CO60282 957 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 SFPQP23246 707 aaKnown RBP eCLIP11.56□□□□□ -0.56
COL4A6-210ENST00000621266 CLIP2Q9UDT6 1046 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-210ENST00000621266 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 ZSCAN12O43309 604 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 CCDC175P0C221 793 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 MYL6BP14649 208 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 EIF5P55010 431 aaKnown RBP11.56□□□□□ -0.56
COL4A6-210ENST00000621266 SART3Q15020 963 aaKnown RBP11.56□□□□□ -0.56
COL4A6-210ENST00000621266 SPATA24Q86W54 205 aa11.56□□□□□ -0.56
COL4A6-210ENST00000621266 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 321.4 ms