RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 LMOD2Q6P5Q4 547 aa7.92□□□□□ -1.14
FMR1-217ENST00000620828 TMC1Q8TDI8 760 aa7.92□□□□□ -1.14
FMR1-217ENST00000620828 FAM196AQ6ZSG2 479 aa7.92□□□□□ -1.14
FMR1-217ENST00000620828 NRXN2Q9P2S2 1712 aa7.91□□□□□ -1.14
FMR1-217ENST00000620828 KCPQ6ZWJ8 1503 aa7.91□□□□□ -1.14
FMR1-217ENST00000620828 KDM6AO15550 1401 aaPredicted RBP7.91□□□□□ -1.14
FMR1-217ENST00000620828 HSP90AB2PQ58FF8 381 aa7.91□□□□□ -1.14
FMR1-217ENST00000620828 EMILIN1Q9Y6C2 1016 aa7.91□□□□□ -1.14
FMR1-217ENST00000620828 IL13P35225 146 aa7.91□□□□□ -1.14
FMR1-217ENST00000620828 RRS1Q15050 365 aaKnown RBP7.91□□□□□ -1.14
FMR1-217ENST00000620828 BCL11BQ9C0K0 894 aaPredicted RBP7.91□□□□□ -1.14
FMR1-217ENST00000620828 STRN4Q9NRL3 753 aa7.9□□□□□ -1.14
FMR1-217ENST00000620828 BRCA1P38398 1863 aaKnown RBP7.9□□□□□ -1.14
FMR1-217ENST00000620828 LAMB4A4D0S4 1761 aa7.9□□□□□ -1.14
FMR1-217ENST00000620828 BCORQ6W2J9 1755 aa7.9□□□□□ -1.14
FMR1-217ENST00000620828 MYH14Q7Z406 1995 aaKnown RBP7.9□□□□□ -1.15
FMR1-217ENST00000620828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.9□□□□□ -1.157e-9■■■□□ 15.5
FMR1-217ENST00000620828 IL2RBP14784 551 aa7.89□□□□□ -1.15
FMR1-217ENST00000620828 EIF4A2Q14240 407 aaKnown RBP7.89□□□□□ -1.15
FMR1-217ENST00000620828 EYA1Q99502 592 aa7.88□□□□□ -1.15
FMR1-217ENST00000620828 FAM182BQ5T319 152 aa7.88□□□□□ -1.15
FMR1-217ENST00000620828 HAP1P54257 671 aaPredicted RBP7.88□□□□□ -1.15
FMR1-217ENST00000620828 TOM1L2Q6ZVM7 507 aa7.88□□□□□ -1.15
FMR1-217ENST00000620828 DLEC1Q9Y238 1755 aa7.88□□□□□ -1.15
FMR1-217ENST00000620828 CYP27B1O15528 508 aa7.87□□□□□ -1.15
FMR1-217ENST00000620828 DEFB132Q7Z7B7 95 aa7.87□□□□□ -1.15
FMR1-217ENST00000620828 EVA1CP58658 441 aa7.87□□□□□ -1.15
FMR1-217ENST00000620828 DDB1Q16531 1140 aa7.87□□□□□ -1.15
FMR1-217ENST00000620828 SCN7AQ01118 1682 aa7.87□□□□□ -1.15
FMR1-217ENST00000620828 SGIP1Q9BQI5 828 aa7.86□□□□□ -1.15
FMR1-217ENST00000620828 EZH2Q15910 746 aaKnown RBP7.86□□□□□ -1.15
FMR1-217ENST00000620828 AKT1S1Q96B36 256 aa7.86□□□□□ -1.15
FMR1-217ENST00000620828 KCNQ2O43526 872 aa7.85□□□□□ -1.15
FMR1-217ENST00000620828 TRIM37O94972 964 aa7.85□□□□□ -1.15
FMR1-217ENST00000620828 EN1Q05925 392 aaPredicted RBP7.84□□□□□ -1.15
FMR1-217ENST00000620828 LRRC4BQ9NT99 713 aa7.84□□□□□ -1.15
FMR1-217ENST00000620828 CEMIPQ8WUJ3 1361 aa7.84□□□□□ -1.15
FMR1-217ENST00000620828 PCDH11XQ9BZA7 1347 aa7.84□□□□□ -1.15
FMR1-217ENST00000620828 PCDH11YQ9BZA8 1340 aa7.84□□□□□ -1.15
FMR1-217ENST00000620828 ANO8Q9HCE9 1232 aaPredicted RBP7.83□□□□□ -1.16
FMR1-217ENST00000620828 EXOC5O00471 708 aa7.83□□□□□ -1.16
FMR1-217ENST00000620828 ARFGEF2Q9Y6D5 1785 aa7.83□□□□□ -1.16
FMR1-217ENST00000620828 MAP3K5Q99683 1374 aa7.83□□□□□ -1.16
FMR1-217ENST00000620828 ZCRB1Q8TBF4 217 aaKnown RBP7.83□□□□□ -1.16
FMR1-217ENST00000620828 PHKG2P15735 406 aa7.82□□□□□ -1.16
FMR1-217ENST00000620828 AFDNP55196 1824 aaKnown RBP7.82□□□□□ -1.16
FMR1-217ENST00000620828 PLEKHG5O94827 1062 aa7.82□□□□□ -1.16
FMR1-217ENST00000620828 AMPHP49418 695 aa7.82□□□□□ -1.16
FMR1-217ENST00000620828 USP35Q9P2H5 1018 aa7.82□□□□□ -1.16
FMR1-217ENST00000620828 USHBP1Q8N6Y0 703 aa7.82□□□□□ -1.16
FMR1-217ENST00000620828 NLRP2Q9NX02 1062 aa7.81□□□□□ -1.16
FMR1-217ENST00000620828 CCDC9Q9Y3X0 531 aaKnown RBP7.81□□□□□ -1.16
FMR1-217ENST00000620828 BAG6P46379 1132 aa7.81□□□□□ -1.16
FMR1-217ENST00000620828 PDE3BQ13370 1112 aa7.81□□□□□ -1.16
FMR1-217ENST00000620828 PLEKHF1Q96S99 279 aa7.81□□□□□ -1.16
FMR1-217ENST00000620828 SOX12O15370 315 aa7.81□□□□□ -1.16
FMR1-217ENST00000620828 PTGER2P43116 358 aa7.81□□□□□ -1.16
FMR1-217ENST00000620828 PPP2R1AP30153 589 aa7.8□□□□□ -1.16
FMR1-217ENST00000620828 AEBP1Q8IUX7 1158 aa7.8□□□□□ -1.16
FMR1-217ENST00000620828 ZNF827Q17R98 1081 aa7.8□□□□□ -1.16
FMR1-217ENST00000620828 SLC4A9Q96Q91 983 aa7.8□□□□□ -1.16
FMR1-217ENST00000620828 SRCAPQ6ZRS2 3230 aa7.8□□□□□ -1.16
FMR1-217ENST00000620828 SLC27A3Q5K4L6 730 aa7.8□□□□□ -1.16
FMR1-217ENST00000620828 APBA3O96018 575 aa7.8□□□□□ -1.16
FMR1-217ENST00000620828 RSPH6AQ9H0K4 717 aa7.8□□□□□ -1.16
FMR1-217ENST00000620828 HEG1Q9ULI3 1381 aa7.79□□□□□ -1.16
FMR1-217ENST00000620828 ANKRD31Q8N7Z5 1873 aa7.79□□□□□ -1.16
FMR1-217ENST00000620828 MTHFSP49914 203 aa7.79□□□□□ -1.16
FMR1-217ENST00000620828 KNSTRNQ9Y448 316 aa7.79□□□□□ -1.16
FMR1-217ENST00000620828 ARFGEF1Q9Y6D6 1849 aa7.79□□□□□ -1.16
FMR1-217ENST00000620828 TXNRD1Q16881 649 aa7.79□□□□□ -1.16
FMR1-217ENST00000620828 AMIGO3Q86WK7 504 aa7.79□□□□□ -1.16
FMR1-217ENST00000620828 MORC1Q86VD1 984 aa7.78□□□□□ -1.16
FMR1-217ENST00000620828 PNPLA7Q6ZV29 1317 aa7.78□□□□□ -1.16
FMR1-217ENST00000620828 PIGBQ92521 554 aa7.78□□□□□ -1.16
FMR1-217ENST00000620828 ERVV-2B6SEH9 535 aa7.78□□□□□ -1.16
FMR1-217ENST00000620828 ANKRD36CQ5JPF3 1778 aa7.78□□□□□ -1.16
FMR1-217ENST00000620828 CSB-PGBD3P0DP91 1061 aa7.77□□□□□ -1.16
FMR1-217ENST00000620828 TATP17735 454 aaPredicted RBP7.77□□□□□ -1.16
FMR1-217ENST00000620828 PDGFDQ9GZP0 370 aaPredicted RBP7.77□□□□□ -1.17
FMR1-217ENST00000620828 ATG3Q9NT62 314 aa7.77□□□□□ -1.17
FMR1-217ENST00000620828 PRIM1P49642 420 aaKnown RBP7.76□□□□□ -1.17
FMR1-217ENST00000620828 SLC15A2Q16348 729 aa7.76□□□□□ -1.17
FMR1-217ENST00000620828 PALLDQ8WX93 1383 aa7.76□□□□□ -1.17
FMR1-217ENST00000620828 COL11A2P13942 1736 aaPredicted RBP7.76□□□□□ -1.17
FMR1-217ENST00000620828 AMOTQ4VCS5 1084 aa7.76□□□□□ -1.17
FMR1-217ENST00000620828 LTV1Q96GA3 475 aaPredicted RBP7.76□□□□□ -1.17
FMR1-217ENST00000620828 ZBTB7CA1YPR0 619 aa7.75□□□□□ -1.17
FMR1-217ENST00000620828 DCAF5Q96JK2 942 aa7.75□□□□□ -1.17
FMR1-217ENST00000620828 IFNL2Q8IZJ0 200 aa7.75□□□□□ -1.17
FMR1-217ENST00000620828 SPG7Q9UQ90 795 aa7.75□□□□□ -1.17
FMR1-217ENST00000620828 LAMB2P55268 1798 aa7.75□□□□□ -1.17
FMR1-217ENST00000620828 MTHFSDQ2M296 383 aaKnown RBP7.75□□□□□ -1.17
FMR1-217ENST00000620828 AKAP4Q5JQC9 854 aa7.75□□□□□ -1.17
FMR1-217ENST00000620828 ITPK1Q13572 414 aa7.75□□□□□ -1.17
FMR1-217ENST00000620828 ACSBG1Q96GR2 724 aa7.75□□□□□ -1.17
FMR1-217ENST00000620828 N4BP2Q86UW6 1770 aaPredicted RBP7.74□□□□□ -1.17
FMR1-217ENST00000620828 CHD4Q14839 1912 aa7.74□□□□□ -1.17
FMR1-217ENST00000620828 RAPGEF4Q8WZA2 1011 aa7.74□□□□□ -1.17
FMR1-217ENST00000620828 CNTNAP4Q9C0A0 1308 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms