RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 CAMTA1Q9Y6Y1 1673 aa19.73■□□□□ 0.75
COPS7B-224ENST00000620578 LARP1Q6PKG0 1096 aaKnown RBP19.72■□□□□ 0.75
COPS7B-224ENST00000620578 MPRIPQ6WCQ1 1025 aa19.72■□□□□ 0.75
COPS7B-224ENST00000620578 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
COPS7B-224ENST00000620578 EXOC6Q8TAG9 804 aa19.71■□□□□ 0.75
COPS7B-224ENST00000620578 RTF1Q92541 710 aaKnown RBP19.71■□□□□ 0.75
COPS7B-224ENST00000620578 FRAT1Q92837 279 aaPredicted RBP19.71■□□□□ 0.75
COPS7B-224ENST00000620578 CPDO75976 1380 aa19.71■□□□□ 0.75
COPS7B-224ENST00000620578 RARSP54136 660 aaKnown RBP19.71■□□□□ 0.75
COPS7B-224ENST00000620578 TOM1L2Q6ZVM7 507 aa19.71■□□□□ 0.75
COPS7B-224ENST00000620578 BTG4Q9NY30 223 aa19.71■□□□□ 0.75
COPS7B-224ENST00000620578 GNAT3A8MTJ3 354 aa19.7■□□□□ 0.74
COPS7B-224ENST00000620578 ZNF853P0CG23 659 aa19.7■□□□□ 0.74
COPS7B-224ENST00000620578 C8orf58Q8NAV2 365 aa19.7■□□□□ 0.74
COPS7B-224ENST00000620578 GAS2L2Q8NHY3 880 aa19.7■□□□□ 0.74
COPS7B-224ENST00000620578 ZNF530Q6P9A1 599 aaPredicted RBP19.7■□□□□ 0.74
COPS7B-224ENST00000620578 CERKQ8TCT0 537 aa19.7■□□□□ 0.74
COPS7B-224ENST00000620578 CFAP44Q96MT7 982 aa19.69■□□□□ 0.74
COPS7B-224ENST00000620578 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
COPS7B-224ENST00000620578 IL16Q14005 1332 aa19.68■□□□□ 0.74
COPS7B-224ENST00000620578 EVA1CP58658 441 aa19.68■□□□□ 0.74
COPS7B-224ENST00000620578 LMOD3Q0VAK6 560 aa19.68■□□□□ 0.74
COPS7B-224ENST00000620578 GNAI1P63096 354 aa19.67■□□□□ 0.74
COPS7B-224ENST00000620578 IFT57Q9NWB7 429 aa19.67■□□□□ 0.74
COPS7B-224ENST00000620578 SSH1Q8WYL5 1049 aa19.67■□□□□ 0.74
COPS7B-224ENST00000620578 RAPGEF4Q8WZA2 1011 aa19.67■□□□□ 0.74
COPS7B-224ENST00000620578 CRBNQ96SW2 442 aa19.66■□□□□ 0.74
COPS7B-224ENST00000620578 MEGF6O75095 1541 aa19.66■□□□□ 0.74
COPS7B-224ENST00000620578 CRB1P82279 1406 aa19.66■□□□□ 0.74
COPS7B-224ENST00000620578 CLUAP1Q96AJ1 413 aa19.66■□□□□ 0.74
COPS7B-224ENST00000620578 ABCA3Q99758 1704 aa19.66■□□□□ 0.74
COPS7B-224ENST00000620578 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
COPS7B-224ENST00000620578 AHDC1Q5TGY3 1603 aaPredicted RBP19.65■□□□□ 0.74
COPS7B-224ENST00000620578 PHLPP1O60346 1717 aa19.65■□□□□ 0.74
COPS7B-224ENST00000620578 CHL1O00533 1208 aa19.65■□□□□ 0.74
COPS7B-224ENST00000620578 MAP3K5Q99683 1374 aa19.65■□□□□ 0.74
COPS7B-224ENST00000620578 WDR17Q8IZU2 1322 aa19.64■□□□□ 0.74
COPS7B-224ENST00000620578 PANK1Q8TE04 598 aa19.64■□□□□ 0.73
COPS7B-224ENST00000620578 COL5A2P05997 1499 aaPredicted RBP19.64■□□□□ 0.73
COPS7B-224ENST00000620578 KCNQ3O43525 872 aa19.63■□□□□ 0.73
COPS7B-224ENST00000620578 VAMP4O75379 141 aa19.63■□□□□ 0.73
COPS7B-224ENST00000620578 SMC4Q9NTJ3 1288 aa19.63■□□□□ 0.73
COPS7B-224ENST00000620578 TSPYL4Q9UJ04 414 aa19.63■□□□□ 0.73
COPS7B-224ENST00000620578 COL16A1Q07092 1604 aaPredicted RBP19.63■□□□□ 0.73
COPS7B-224ENST00000620578 TATP17735 454 aaPredicted RBP19.62■□□□□ 0.73
COPS7B-224ENST00000620578 NCAPD2Q15021 1401 aa19.62■□□□□ 0.73
COPS7B-224ENST00000620578 RLBP1P12271 317 aa19.61■□□□□ 0.73
COPS7B-224ENST00000620578 CALD1Q05682 793 aaKnown RBP19.61■□□□□ 0.73
COPS7B-224ENST00000620578 TWISTNBQ3B726 338 aaPredicted RBP19.61■□□□□ 0.73
COPS7B-224ENST00000620578 NECTIN2Q92692 538 aa19.61■□□□□ 0.73
COPS7B-224ENST00000620578 CYP27B1O15528 508 aa19.61■□□□□ 0.73
COPS7B-224ENST00000620578 C1orf141Q5JVX7 400 aa19.61■□□□□ 0.73
COPS7B-224ENST00000620578 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
COPS7B-224ENST00000620578 AKAP4Q5JQC9 854 aa19.6■□□□□ 0.73
COPS7B-224ENST00000620578 LMO7Q8WWI1 1683 aa19.6■□□□□ 0.73
COPS7B-224ENST00000620578 FAM208AQ9UK61 1670 aaKnown RBP19.59■□□□□ 0.73
COPS7B-224ENST00000620578 AMOTQ4VCS5 1084 aa19.59■□□□□ 0.73
COPS7B-224ENST00000620578 RNMTO43148 476 aaKnown RBP19.58■□□□□ 0.73
COPS7B-224ENST00000620578 DDX54Q8TDD1 881 aaKnown RBP19.58■□□□□ 0.73
COPS7B-224ENST00000620578 HSPA1LP34931 641 aa19.58■□□□□ 0.72
COPS7B-224ENST00000620578 NOB1Q9ULX3 412 aaKnown RBP19.58■□□□□ 0.72
COPS7B-224ENST00000620578 COG6Q9Y2V7 657 aa19.58■□□□□ 0.72
COPS7B-224ENST00000620578 TAF7Q15545 349 aaPredicted RBP19.57■□□□□ 0.72
COPS7B-224ENST00000620578 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
COPS7B-224ENST00000620578 PHKG2P15735 406 aa19.56■□□□□ 0.72
COPS7B-224ENST00000620578 CARD10Q9BWT7 1032 aa19.56■□□□□ 0.72
COPS7B-224ENST00000620578 HTATSF1O43719 755 aaKnown RBP19.56■□□□□ 0.72
COPS7B-224ENST00000620578 TEFQ10587 303 aa19.55■□□□□ 0.72
COPS7B-224ENST00000620578 SLC39A6Q13433 755 aa19.55■□□□□ 0.72
COPS7B-224ENST00000620578 CEMIPQ8WUJ3 1361 aa19.55■□□□□ 0.72
COPS7B-224ENST00000620578 C8orf37Q96NL8 207 aa19.55■□□□□ 0.72
COPS7B-224ENST00000620578 NFATC2IPQ8NCF5 419 aa19.54■□□□□ 0.72
COPS7B-224ENST00000620578 SPG7Q9UQ90 795 aa19.54■□□□□ 0.72
COPS7B-224ENST00000620578 PRAMEF22A3QJZ6 481 aa19.53■□□□□ 0.72
COPS7B-224ENST00000620578 IL2RBP14784 551 aa19.53■□□□□ 0.72
COPS7B-224ENST00000620578 TRIM27P14373 513 aa19.53■□□□□ 0.72
COPS7B-224ENST00000620578 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.53■□□□□ 0.72
COPS7B-224ENST00000620578 ZCRB1Q8TBF4 217 aaKnown RBP19.53■□□□□ 0.72
COPS7B-224ENST00000620578 BTBD11A6QL63 1104 aa19.52■□□□□ 0.72
COPS7B-224ENST00000620578 IFNL2Q8IZJ0 200 aa19.52■□□□□ 0.71
COPS7B-224ENST00000620578 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
COPS7B-224ENST00000620578 KAT6BQ8WYB5 2073 aa19.51■□□□□ 0.71
COPS7B-224ENST00000620578 MRPL50Q8N5N7 158 aaKnown RBP19.51■□□□□ 0.71
COPS7B-224ENST00000620578 CCDC9Q9Y3X0 531 aaKnown RBP19.51■□□□□ 0.71
COPS7B-224ENST00000620578 CCDC136Q96JN2 1154 aa19.51■□□□□ 0.71
COPS7B-224ENST00000620578 COL22A1Q8NFW1 1626 aaPredicted RBP19.5■□□□□ 0.71
COPS7B-224ENST00000620578 NGLY1Q96IV0 654 aa19.5■□□□□ 0.71
COPS7B-224ENST00000620578 CT47B1P0C2W7 299 aaPredicted RBP19.49■□□□□ 0.71
COPS7B-224ENST00000620578 EIF2S2P20042 333 aaKnown RBP19.49■□□□□ 0.71
COPS7B-224ENST00000620578 G2E3Q7L622 706 aa19.49■□□□□ 0.71
COPS7B-224ENST00000620578 EP400Q96L91 3159 aa19.49■□□□□ 0.71
COPS7B-224ENST00000620578 OVOS2A0A0G2JMS6 1433 aa19.49■□□□□ 0.71
COPS7B-224ENST00000620578 ZKSCAN2Q63HK3 967 aa19.49■□□□□ 0.71
COPS7B-224ENST00000620578 SKAP1Q86WV1 359 aa19.49■□□□□ 0.71
COPS7B-224ENST00000620578 ABCC6O95255 1503 aa19.48■□□□□ 0.71
COPS7B-224ENST00000620578 ANXA1P04083 346 aa19.48■□□□□ 0.71
COPS7B-224ENST00000620578 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
COPS7B-224ENST00000620578 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
COPS7B-224ENST00000620578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.47■□□□□ 0.718e-10■■■□□ 14.8
COPS7B-224ENST00000620578 ATF7IPQ6VMQ6 1270 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms