RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 CHL1O00533 1208 aa16.62■□□□□ 0.25
TMCO3-210ENST00000620021 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
TMCO3-210ENST00000620021 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
TMCO3-210ENST00000620021 ARHGEF10O15013 1369 aa16.62■□□□□ 0.25
TMCO3-210ENST00000620021 AEBP2Q6ZN18 517 aaPredicted RBP16.61■□□□□ 0.25
TMCO3-210ENST00000620021 CABLES1Q8TDN4 633 aa16.61■□□□□ 0.25
TMCO3-210ENST00000620021 DDX19BQ9UMR2 479 aa16.61■□□□□ 0.25
TMCO3-210ENST00000620021 TMEM94Q12767 1356 aa16.61■□□□□ 0.25
TMCO3-210ENST00000620021 ATF3P18847 181 aa16.61■□□□□ 0.25
TMCO3-210ENST00000620021 RWDD1Q9H446 243 aaPredicted RBP16.6■□□□□ 0.25
TMCO3-210ENST00000620021 IP6K1Q92551 441 aa16.59■□□□□ 0.25
TMCO3-210ENST00000620021 AXIN2Q9Y2T1 843 aa16.59■□□□□ 0.25
TMCO3-210ENST00000620021 C8orf34Q49A92 452 aa16.59■□□□□ 0.25
TMCO3-210ENST00000620021 ZBTB40Q9NUA8 1239 aa16.59■□□□□ 0.25
TMCO3-210ENST00000620021 IL17REQ8NFR9 667 aa16.58■□□□□ 0.25
TMCO3-210ENST00000620021 KDRP35968 1356 aa16.58■□□□□ 0.25
TMCO3-210ENST00000620021 MARF1Q9Y4F3 1742 aaKnown RBP16.58■□□□□ 0.24
TMCO3-210ENST00000620021 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
TMCO3-210ENST00000620021 RGPD1P0DJD0 1748 aa16.57■□□□□ 0.24
TMCO3-210ENST00000620021 GNAT3A8MTJ3 354 aa16.57■□□□□ 0.24
TMCO3-210ENST00000620021 CRB1P82279 1406 aa16.56■□□□□ 0.24
TMCO3-210ENST00000620021 KDM4FA0A1W2PPD8 638 aa16.56■□□□□ 0.24
TMCO3-210ENST00000620021 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
TMCO3-210ENST00000620021 FAM161AQ3B820 660 aa16.56■□□□□ 0.24
TMCO3-210ENST00000620021 LGR6Q9HBX8 967 aa16.56■□□□□ 0.24
TMCO3-210ENST00000620021 C1orf167Q5SNV9 1468 aa16.56■□□□□ 0.24
TMCO3-210ENST00000620021 G2E3Q7L622 706 aa16.56■□□□□ 0.24
TMCO3-210ENST00000620021 KCNH5Q8NCM2 988 aa16.55■□□□□ 0.24
TMCO3-210ENST00000620021 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
TMCO3-210ENST00000620021 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
TMCO3-210ENST00000620021 A0A0U1RQG5 324 aaPredicted RBP16.54■□□□□ 0.24
TMCO3-210ENST00000620021 SEC24BO95487 1268 aa16.54■□□□□ 0.24
TMCO3-210ENST00000620021 ARHGEF25Q86VW2 580 aa16.54■□□□□ 0.24
TMCO3-210ENST00000620021 F6X3S4 739 aa16.54■□□□□ 0.24
TMCO3-210ENST00000620021 ZNF428Q96B54 188 aa16.54■□□□□ 0.24
TMCO3-210ENST00000620021 CHRNA2Q15822 529 aa16.53■□□□□ 0.24
TMCO3-210ENST00000620021 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
TMCO3-210ENST00000620021 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
TMCO3-210ENST00000620021 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
TMCO3-210ENST00000620021 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
TMCO3-210ENST00000620021 NWD1Q149M9 1564 aa16.52■□□□□ 0.24
TMCO3-210ENST00000620021 LTN1O94822 1766 aa16.52■□□□□ 0.23
TMCO3-210ENST00000620021 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.23
TMCO3-210ENST00000620021 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.23
TMCO3-210ENST00000620021 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.23
TMCO3-210ENST00000620021 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
TMCO3-210ENST00000620021 NFAT5O94916 1531 aa16.51■□□□□ 0.23
TMCO3-210ENST00000620021 MSH6P52701 1360 aa16.5■□□□□ 0.23
TMCO3-210ENST00000620021 KCNQ3O43525 872 aa16.5■□□□□ 0.23
TMCO3-210ENST00000620021 AAMPQ13685 434 aa16.5■□□□□ 0.23
TMCO3-210ENST00000620021 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
TMCO3-210ENST00000620021 ARHGAP45Q92619 1136 aa16.5■□□□□ 0.23
TMCO3-210ENST00000620021 STRCP1A6NGW2 1772 aa16.5■□□□□ 0.23
TMCO3-210ENST00000620021 ABCC4O15439 1325 aa16.5■□□□□ 0.23
TMCO3-210ENST00000620021 ZNF335Q9H4Z2 1342 aaPredicted RBP16.5■□□□□ 0.23
TMCO3-210ENST00000620021 ZNF530Q6P9A1 599 aaPredicted RBP16.5■□□□□ 0.23
TMCO3-210ENST00000620021 SIRT2Q8IXJ6 389 aa16.49■□□□□ 0.23
TMCO3-210ENST00000620021 API5Q9BZZ5 524 aaKnown RBP16.49■□□□□ 0.23
TMCO3-210ENST00000620021 MAP3K5Q99683 1374 aa16.49■□□□□ 0.23
TMCO3-210ENST00000620021 HDAC1Q13547 482 aaPredicted RBP16.49■□□□□ 0.23
TMCO3-210ENST00000620021 RGPD2P0DJD1 1756 aa16.49■□□□□ 0.23
TMCO3-210ENST00000620021 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
TMCO3-210ENST00000620021 TAF7Q15545 349 aaPredicted RBP16.48■□□□□ 0.23
TMCO3-210ENST00000620021 NLRP2Q9NX02 1062 aa16.48■□□□□ 0.23
TMCO3-210ENST00000620021 MST1RQ04912 1400 aa16.48■□□□□ 0.23
TMCO3-210ENST00000620021 APBB1O00213 710 aa16.48■□□□□ 0.23
TMCO3-210ENST00000620021 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
TMCO3-210ENST00000620021 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
TMCO3-210ENST00000620021 CADPS2Q86UW7 1296 aa16.47■□□□□ 0.23
TMCO3-210ENST00000620021 RTL1A6NKG5 1358 aa16.46■□□□□ 0.23
TMCO3-210ENST00000620021 MEIS3Q99687 375 aa16.46■□□□□ 0.23
TMCO3-210ENST00000620021 ANXA1P04083 346 aa16.46■□□□□ 0.23
TMCO3-210ENST00000620021 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
TMCO3-210ENST00000620021 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
TMCO3-210ENST00000620021 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
TMCO3-210ENST00000620021 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
TMCO3-210ENST00000620021 PDE4CQ08493 712 aa16.45■□□□□ 0.22
TMCO3-210ENST00000620021 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
TMCO3-210ENST00000620021 NBR1Q14596 966 aa16.44■□□□□ 0.22
TMCO3-210ENST00000620021 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
TMCO3-210ENST00000620021 TEFQ10587 303 aa16.44■□□□□ 0.22
TMCO3-210ENST00000620021 USP19O94966 1318 aa16.44■□□□□ 0.22
TMCO3-210ENST00000620021 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
TMCO3-210ENST00000620021 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
TMCO3-210ENST00000620021 PLEKHO1Q53GL0 409 aaPredicted RBP16.43■□□□□ 0.22
TMCO3-210ENST00000620021 RGS12O14924 1447 aa16.43■□□□□ 0.22
TMCO3-210ENST00000620021 BRINP3Q76B58 766 aa16.42■□□□□ 0.22
TMCO3-210ENST00000620021 DEKP35659 375 aaKnown RBP16.42■□□□□ 0.22
TMCO3-210ENST00000620021 PRAMEF22A3QJZ6 481 aa16.42■□□□□ 0.22
TMCO3-210ENST00000620021 ERBB3P21860 1342 aa16.42■□□□□ 0.22
TMCO3-210ENST00000620021 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
TMCO3-210ENST00000620021 HDGFL1Q5TGJ6 251 aa16.42■□□□□ 0.22
TMCO3-210ENST00000620021 NPHP3Q7Z494 1330 aa16.41■□□□□ 0.22
TMCO3-210ENST00000620021 INTS3Q68E01 1043 aaKnown RBP16.41■□□□□ 0.22
TMCO3-210ENST00000620021 PXDNQ92626 1479 aa16.41■□□□□ 0.22
TMCO3-210ENST00000620021 BTBD11A6QL63 1104 aa16.41■□□□□ 0.22
TMCO3-210ENST00000620021 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
TMCO3-210ENST00000620021 FLIIQ13045 1269 aa16.41■□□□□ 0.22
TMCO3-210ENST00000620021 CHD1LQ86WJ1 897 aa16.41■□□□□ 0.22
TMCO3-210ENST00000620021 NUCB1Q02818 461 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms