RNA–Protein interactions for RNA: ENST00000619038.4

CDRT4-204, CMT1A duplicated region transcript 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT4, Length 2,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4-204ENST00000619038 PPIP5K1Q6PFW1 1433 aa13.91□□□□□ -0.18
CDRT4-204ENST00000619038 PTPRCP08575 1304 aa13.91□□□□□ -0.18
CDRT4-204ENST00000619038 CEP135Q66GS9 1140 aa13.91□□□□□ -0.18
CDRT4-204ENST00000619038 GOLGA6L6A8MZA4 724 aa13.9□□□□□ -0.18
CDRT4-204ENST00000619038 POLR3GO15318 223 aaPredicted RBP13.9□□□□□ -0.18
CDRT4-204ENST00000619038 BMS1Q14692 1282 aaKnown RBP13.9□□□□□ -0.18
CDRT4-204ENST00000619038 TPD52L1Q16890 204 aaPredicted RBP13.9□□□□□ -0.18
CDRT4-204ENST00000619038 SIRT2Q8IXJ6 389 aa13.9□□□□□ -0.18
CDRT4-204ENST00000619038 ADGRL2O95490 1459 aa13.9□□□□□ -0.18
CDRT4-204ENST00000619038 PLB1Q6P1J6 1458 aa13.9□□□□□ -0.18
CDRT4-204ENST00000619038 SPAG9O60271 1321 aaKnown RBP13.89□□□□□ -0.19
CDRT4-204ENST00000619038 PLEKHM2Q8IWE5 1019 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 SMARCE1Q969G3 411 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 DRC1Q96MC2 740 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 SLC26A8Q96RN1 970 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 IQSEC2Q5JU85 1478 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 USP27XA6NNY8 438 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 SART3Q15020 963 aaKnown RBP13.89□□□□□ -0.19
CDRT4-204ENST00000619038 SLFNL1Q499Z3 407 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 ZSCAN25Q6NSZ9 544 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 CTR9Q6PD62 1173 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 CCDC191Q8NCU4 936 aa13.89□□□□□ -0.19
CDRT4-204ENST00000619038 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
CDRT4-204ENST00000619038 NOL8Q76FK4 1167 aaKnown RBP13.88□□□□□ -0.19
CDRT4-204ENST00000619038 GCC1Q96CN9 775 aa13.88□□□□□ -0.19
CDRT4-204ENST00000619038 CARD10Q9BWT7 1032 aa13.88□□□□□ -0.19
CDRT4-204ENST00000619038 CNPY2Q9Y2B0 182 aa13.88□□□□□ -0.19
CDRT4-204ENST00000619038 JRKLQ9Y4A0 524 aa13.88□□□□□ -0.19
CDRT4-204ENST00000619038 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
CDRT4-204ENST00000619038 POLR3AO14802 1390 aaPredicted RBP13.88□□□□□ -0.19
CDRT4-204ENST00000619038 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
CDRT4-204ENST00000619038 PNMA6AP0CW24 399 aaPredicted RBP13.88□□□□□ -0.19
CDRT4-204ENST00000619038 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
CDRT4-204ENST00000619038 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
CDRT4-204ENST00000619038 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.88□□□□□ -0.19
CDRT4-204ENST00000619038 H2AFXP16104 143 aaPredicted RBP13.87□□□□□ -0.19
CDRT4-204ENST00000619038 NEK4P51957 841 aa13.87□□□□□ -0.19
CDRT4-204ENST00000619038 ZSCAN26Q16670 478 aa13.87□□□□□ -0.19
CDRT4-204ENST00000619038 ERO1AQ96HE7 468 aa13.87□□□□□ -0.19
CDRT4-204ENST00000619038 CEP83Q9Y592 693 aa13.87□□□□□ -0.19
CDRT4-204ENST00000619038 ABCA10Q8WWZ4 1543 aa13.87□□□□□ -0.19
CDRT4-204ENST00000619038 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
CDRT4-204ENST00000619038 LRRN4CLQ8ND94 238 aa13.87□□□□□ -0.19
CDRT4-204ENST00000619038 CACTINQ8WUQ7 758 aaKnown RBP13.87□□□□□ -0.19
CDRT4-204ENST00000619038 CCDC141Q6ZP82 1450 aa13.87□□□□□ -0.19
CDRT4-204ENST00000619038 CLCN6P51797 869 aa13.86□□□□□ -0.19
CDRT4-204ENST00000619038 PACS2Q86VP3 889 aa13.86□□□□□ -0.19
CDRT4-204ENST00000619038 BRMS1Q9HCU9 246 aa13.86□□□□□ -0.19
CDRT4-204ENST00000619038 CUL4AQ13619 759 aa13.86□□□□□ -0.19
CDRT4-204ENST00000619038 ERCC6LQ2NKX8 1250 aa13.86□□□□□ -0.19
CDRT4-204ENST00000619038 SRLQ86TD4 932 aa13.86□□□□□ -0.19
CDRT4-204ENST00000619038 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDRT4-204ENST00000619038 CUL7Q14999 1698 aa13.85□□□□□ -0.19
CDRT4-204ENST00000619038 PATL2C9JE40 543 aaKnown RBP13.85□□□□□ -0.19
CDRT4-204ENST00000619038 ZBTB7BO15156 539 aaPredicted RBP13.85□□□□□ -0.19
CDRT4-204ENST00000619038 CCDC172P0C7W6 258 aa13.85□□□□□ -0.19
CDRT4-204ENST00000619038 CC2D2AQ9P2K1 1620 aa13.85□□□□□ -0.19
CDRT4-204ENST00000619038 NOS1P29475 1434 aa13.85□□□□□ -0.19
CDRT4-204ENST00000619038 LAMC1P11047 1609 aa13.85□□□□□ -0.19
CDRT4-204ENST00000619038 OTUD7AQ8TE49 926 aaPredicted RBP13.85□□□□□ -0.19
CDRT4-204ENST00000619038 SRCIN1Q9C0H9 1055 aa13.85□□□□□ -0.19
CDRT4-204ENST00000619038 RRP15Q9Y3B9 282 aaKnown RBP13.85□□□□□ -0.19
CDRT4-204ENST00000619038 CT47B1P0C2W7 299 aaPredicted RBP13.84□□□□□ -0.19
CDRT4-204ENST00000619038 TTC22Q5TAA0 569 aa13.84□□□□□ -0.19
CDRT4-204ENST00000619038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDRT4-204ENST00000619038 LUZP1Q86V48 1076 aa13.84□□□□□ -0.19
CDRT4-204ENST00000619038 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
CDRT4-204ENST00000619038 PLA2R1Q13018 1463 aa13.84□□□□□ -0.19
CDRT4-204ENST00000619038 PTPRGP23470 1445 aa13.84□□□□□ -0.19
CDRT4-204ENST00000619038 CCDC144BQ3MJ40 725 aa13.84□□□□□ -0.19
CDRT4-204ENST00000619038 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
CDRT4-204ENST00000619038 DRC7Q8IY82 874 aa13.84□□□□□ -0.19
CDRT4-204ENST00000619038 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
CDRT4-204ENST00000619038 E2F4Q16254 413 aa13.83□□□□□ -0.2
CDRT4-204ENST00000619038 SYNMO15061 1565 aa13.83□□□□□ -0.2
CDRT4-204ENST00000619038 SLU7O95391 586 aaKnown RBP13.83□□□□□ -0.2
CDRT4-204ENST00000619038 ARID5BQ14865 1188 aa13.83□□□□□ -0.2
CDRT4-204ENST00000619038 DNAJC21Q5F1R6 531 aaKnown RBP13.83□□□□□ -0.2
CDRT4-204ENST00000619038 TEX35Q5T0J7 233 aa13.83□□□□□ -0.2
CDRT4-204ENST00000619038 NYAP1Q6ZVC0 841 aa13.83□□□□□ -0.2
CDRT4-204ENST00000619038 RAD50Q92878 1312 aa13.83□□□□□ -0.2
CDRT4-204ENST00000619038 SDSP20132 328 aa13.82□□□□□ -0.2
CDRT4-204ENST00000619038 UBE2HP62256 183 aa13.82□□□□□ -0.2
CDRT4-204ENST00000619038 ZRANB2O95218 330 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDRT4-204ENST00000619038 RPAP1Q9BWH6 1393 aaPredicted RBP13.81□□□□□ -0.2
CDRT4-204ENST00000619038 ATP2B1P20020 1258 aa13.81□□□□□ -0.2
CDRT4-204ENST00000619038 PTPN14Q15678 1187 aa13.81□□□□□ -0.2
CDRT4-204ENST00000619038 REXO1L1PQ8IX06 675 aa13.81□□□□□ -0.2
CDRT4-204ENST00000619038 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
CDRT4-204ENST00000619038 A0A1B0GUL7 405 aa13.81□□□□□ -0.2
CDRT4-204ENST00000619038 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
CDRT4-204ENST00000619038 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
CDRT4-204ENST00000619038 FBXO18Q8NFZ0 1043 aa13.81□□□□□ -0.2
CDRT4-204ENST00000619038 UBXN6Q9BZV1 441 aa13.81□□□□□ -0.2
CDRT4-204ENST00000619038 TRMT1Q9NXH9 659 aaKnown RBP13.81□□□□□ -0.2
CDRT4-204ENST00000619038 ADGBQ8N7X0 1667 aa13.8□□□□□ -0.2
CDRT4-204ENST00000619038 ZNF75DP51815 510 aa13.8□□□□□ -0.2
CDRT4-204ENST00000619038 WDR62O43379 1518 aa13.8□□□□□ -0.2
CDRT4-204ENST00000619038 ITSN2Q9NZM3 1697 aa13.8□□□□□ -0.2
CDRT4-204ENST00000619038 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms