RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 TXNRD1Q16881 649 aa30.15■■■□□ 2.42
TRAF4-217ENST00000618771 MEGF6O75095 1541 aa30.14■■■□□ 2.42
TRAF4-217ENST00000618771 NBPF6Q5VWK0 638 aa30.14■■■□□ 2.42
TRAF4-217ENST00000618771 NBPF4Q96M43 638 aa30.14■■■□□ 2.42
TRAF4-217ENST00000618771 PANK3Q9H999 370 aa30.14■■■□□ 2.42
TRAF4-217ENST00000618771 EMILIN1Q9Y6C2 1016 aa30.14■■■□□ 2.42
TRAF4-217ENST00000618771 BTAF1O14981 1849 aa30.13■■■□□ 2.41
TRAF4-217ENST00000618771 STK32BQ9NY57 414 aa30.12■■■□□ 2.41
TRAF4-217ENST00000618771 ACSBG1Q96GR2 724 aa30.11■■■□□ 2.41
TRAF4-217ENST00000618771 USHBP1Q8N6Y0 703 aa30.1■■■□□ 2.41
TRAF4-217ENST00000618771 DDX54Q8TDD1 881 aaKnown RBP30.1■■■□□ 2.41
TRAF4-217ENST00000618771 PPM1GO15355 546 aaPredicted RBP30.09■■■□□ 2.41
TRAF4-217ENST00000618771 SLC15A2Q16348 729 aa30.09■■■□□ 2.41
TRAF4-217ENST00000618771 ATF5Q9Y2D1 282 aaPredicted RBP30.09■■■□□ 2.41
TRAF4-217ENST00000618771 DOT1LQ8TEK3 1739 aa30.08■■■□□ 2.41
TRAF4-217ENST00000618771 PTGER2P43116 358 aa30.06■■■□□ 2.4
TRAF4-217ENST00000618771 ZCRB1Q8TBF4 217 aaKnown RBP30.06■■■□□ 2.4
TRAF4-217ENST00000618771 RAPGEF4Q8WZA2 1011 aa30.06■■■□□ 2.4
TRAF4-217ENST00000618771 NSD2O96028 1365 aa30.05■■■□□ 2.4
TRAF4-217ENST00000618771 KIF7Q2M1P5 1343 aa30.03■■■□□ 2.4
TRAF4-217ENST00000618771 WASHC2AQ641Q2 1341 aa30.03■■■□□ 2.4
TRAF4-217ENST00000618771 TNNT2P45379 298 aaPredicted RBP30.03■■■□□ 2.4
TRAF4-217ENST00000618771 POLKQ9UBT6 870 aa30.03■■■□□ 2.4
TRAF4-217ENST00000618771 TATP17735 454 aaPredicted RBP30.01■■■□□ 2.39
TRAF4-217ENST00000618771 NCAPD2Q15021 1401 aa29.99■■■□□ 2.39
TRAF4-217ENST00000618771 PKD1L3Q7Z443 1732 aa29.99■■■□□ 2.39
TRAF4-217ENST00000618771 MTFR1LQ9H019 292 aa29.98■■■□□ 2.39
TRAF4-217ENST00000618771 KNSTRNQ9Y448 316 aa29.98■■■□□ 2.39
TRAF4-217ENST00000618771 FHDC1Q9C0D6 1143 aaPredicted RBP29.96■■■□□ 2.39
TRAF4-217ENST00000618771 SYTL4Q96C24 671 aaPredicted RBP29.95■■■□□ 2.39
TRAF4-217ENST00000618771 SYT17Q9BSW7 474 aa29.95■■■□□ 2.39
TRAF4-217ENST00000618771 MORC1Q86VD1 984 aa29.94■■■□□ 2.38
TRAF4-217ENST00000618771 PCDH11XQ9BZA7 1347 aa29.94■■■□□ 2.38
TRAF4-217ENST00000618771 PCDH11YQ9BZA8 1340 aa29.94■■■□□ 2.38
TRAF4-217ENST00000618771 PRIM1P49642 420 aaKnown RBP29.93■■■□□ 2.38
TRAF4-217ENST00000618771 EYA1Q99502 592 aa29.93■■■□□ 2.38
TRAF4-217ENST00000618771 PAPPAQ13219 1627 aa29.93■■■□□ 2.38
TRAF4-217ENST00000618771 SGIP1Q9BQI5 828 aa29.92■■■□□ 2.38
TRAF4-217ENST00000618771 LY75O60449 1722 aa29.91■■■□□ 2.38
TRAF4-217ENST00000618771 UTRNP46939 3433 aa29.9■■■□□ 2.38
TRAF4-217ENST00000618771 EIF4A2Q14240 407 aaKnown RBP29.9■■■□□ 2.38
TRAF4-217ENST00000618771 ZNF827Q17R98 1081 aa29.89■■■□□ 2.38
TRAF4-217ENST00000618771 AMER1Q5JTC6 1135 aaPredicted RBP29.88■■■□□ 2.37
TRAF4-217ENST00000618771 LRRC4BQ9NT99 713 aa29.88■■■□□ 2.37
TRAF4-217ENST00000618771 TOGARAM1Q9Y4F4 1720 aa29.88■■■□□ 2.37
TRAF4-217ENST00000618771 ITGB4P16144 1822 aa29.87■■■□□ 2.37
TRAF4-217ENST00000618771 ARXQ96QS3 562 aa29.87■■■□□ 2.37
TRAF4-217ENST00000618771 CYP27B1O15528 508 aa29.86■■■□□ 2.37
TRAF4-217ENST00000618771 SPG7Q9UQ90 795 aa29.84■■■□□ 2.37
TRAF4-217ENST00000618771 SLC27A3Q5K4L6 730 aa29.83■■■□□ 2.37
TRAF4-217ENST00000618771 IGSF1Q8N6C5 1336 aa29.82■■■□□ 2.36
TRAF4-217ENST00000618771 ZNF784Q8NCA9 323 aaPredicted RBP29.82■■■□□ 2.36
TRAF4-217ENST00000618771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.81■■■□□ 2.363e-6■□□□□ 10.9
TRAF4-217ENST00000618771 PER1O15534 1290 aaPredicted RBP29.8■■■□□ 2.36
TRAF4-217ENST00000618771 AKT1S1Q96B36 256 aa29.8■■■□□ 2.36
TRAF4-217ENST00000618771 QSER1Q2KHR3 1735 aa29.79■■■□□ 2.36
TRAF4-217ENST00000618771 CHD4Q14839 1912 aa29.79■■■□□ 2.36
TRAF4-217ENST00000618771 PLEKHG2Q9H7P9 1386 aa29.78■■■□□ 2.36
TRAF4-217ENST00000618771 TUBGCP6Q96RT7 1819 aa29.78■■■□□ 2.36
TRAF4-217ENST00000618771 KCNQ4P56696 695 aa29.77■■■□□ 2.36
TRAF4-217ENST00000618771 NKX1-1Q15270 411 aaPredicted RBP29.76■■■□□ 2.35
TRAF4-217ENST00000618771 MAP3K5Q99683 1374 aa29.76■■■□□ 2.35
TRAF4-217ENST00000618771 CC2D1BQ5T0F9 858 aaKnown RBP29.75■■■□□ 2.35
TRAF4-217ENST00000618771 MPRIPQ6WCQ1 1025 aa29.75■■■□□ 2.35
TRAF4-217ENST00000618771 SLC16A10Q8TF71 515 aa29.75■■■□□ 2.35
TRAF4-217ENST00000618771 CCNL1Q9UK58 526 aaPredicted RBP29.74■■■□□ 2.35
TRAF4-217ENST00000618771 IFNL2Q8IZJ0 200 aa29.73■■■□□ 2.35
TRAF4-217ENST00000618771 KLHL34Q8N239 644 aa29.73■■■□□ 2.35
TRAF4-217ENST00000618771 TFCP2L1Q9NZI6 479 aa29.73■■■□□ 2.35
TRAF4-217ENST00000618771 TAF1LQ8IZX4 1826 aa29.73■■■□□ 2.35
TRAF4-217ENST00000618771 C5P01031 1676 aa29.72■■■□□ 2.35
TRAF4-217ENST00000618771 PNPLA7Q6ZV29 1317 aa29.72■■■□□ 2.35
TRAF4-217ENST00000618771 PHKG2P15735 406 aa29.71■■■□□ 2.35
TRAF4-217ENST00000618771 POLD1P28340 1107 aa29.71■■■□□ 2.35
TRAF4-217ENST00000618771 NPC1L1Q9UHC9 1359 aa29.71■■■□□ 2.35
TRAF4-217ENST00000618771 PALLDQ8WX93 1383 aa29.7■■■□□ 2.35
TRAF4-217ENST00000618771 GPR162Q16538 588 aa29.7■■■□□ 2.35
TRAF4-217ENST00000618771 MTHFSP49914 203 aa29.69■■■□□ 2.34
TRAF4-217ENST00000618771 AEBP1Q8IUX7 1158 aa29.69■■■□□ 2.34
TRAF4-217ENST00000618771 IL13P35225 146 aa29.68■■■□□ 2.34
TRAF4-217ENST00000618771 PLEKHO1Q53GL0 409 aaPredicted RBP29.67■■■□□ 2.34
TRAF4-217ENST00000618771 PIGBQ92521 554 aa29.67■■■□□ 2.34
TRAF4-217ENST00000618771 SMARCC1Q92922 1105 aaPredicted RBP29.66■■■□□ 2.34
TRAF4-217ENST00000618771 KDRP35968 1356 aa29.65■■■□□ 2.34
TRAF4-217ENST00000618771 COL24A1Q17RW2 1714 aa29.65■■■□□ 2.34
TRAF4-217ENST00000618771 SULT6B1Q6IMI4 303 aa29.65■■■□□ 2.34
TRAF4-217ENST00000618771 TMOD3Q9NYL9 352 aa29.65■■■□□ 2.34
TRAF4-217ENST00000618771 CNGB1Q14028 1251 aaPredicted RBP29.64■■■□□ 2.34
TRAF4-217ENST00000618771 AMOTQ4VCS5 1084 aa29.64■■■□□ 2.34
TRAF4-217ENST00000618771 PELP1Q8IZL8 1130 aaKnown RBP29.64■■■□□ 2.34
TRAF4-217ENST00000618771 ZNF530Q6P9A1 599 aaPredicted RBP29.62■■■□□ 2.33
TRAF4-217ENST00000618771 GOLGB1Q14789 3259 aaKnown RBP29.62■■■□□ 2.33
TRAF4-217ENST00000618771 HSP90AB1P08238 724 aaKnown RBP29.61■■■□□ 2.33
TRAF4-217ENST00000618771 MSH5O43196 834 aa29.6■■■□□ 2.33
TRAF4-217ENST00000618771 HMGB2P26583 209 aaKnown RBP29.6■■■□□ 2.33
TRAF4-217ENST00000618771 C4BP0C0L5 1744 aa29.59■■■□□ 2.33
TRAF4-217ENST00000618771 NLGN2Q8NFZ4 835 aa29.59■■■□□ 2.33
TRAF4-217ENST00000618771 DCAF5Q96JK2 942 aa29.59■■■□□ 2.33
TRAF4-217ENST00000618771 KDM6AO15550 1401 aaPredicted RBP29.57■■■□□ 2.32
TRAF4-217ENST00000618771 DIAPH1O60610 1272 aaKnown RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms