RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 ZCRB1Q8TBF4 217 aaKnown RBP30.83■■■□□ 2.53
ARHGEF1-223ENST00000617585 ACSBG1Q96GR2 724 aa30.83■■■□□ 2.53
ARHGEF1-223ENST00000617585 TXNRD1Q16881 649 aa30.82■■■□□ 2.52
ARHGEF1-223ENST00000617585 DDX54Q8TDD1 881 aaKnown RBP30.82■■■□□ 2.52
ARHGEF1-223ENST00000617585 NSD2O96028 1365 aa30.81■■■□□ 2.52
ARHGEF1-223ENST00000617585 POLKQ9UBT6 870 aa30.8■■■□□ 2.52
ARHGEF1-223ENST00000617585 DOT1LQ8TEK3 1739 aa30.79■■■□□ 2.52
ARHGEF1-223ENST00000617585 USHBP1Q8N6Y0 703 aa30.79■■■□□ 2.52
ARHGEF1-223ENST00000617585 RAPGEF4Q8WZA2 1011 aa30.78■■■□□ 2.52
ARHGEF1-223ENST00000617585 ANO8Q9HCE9 1232 aaPredicted RBP30.78■■■□□ 2.52
ARHGEF1-223ENST00000617585 CASZ1Q86V15 1759 aa30.77■■■□□ 2.52
ARHGEF1-223ENST00000617585 PAPPAQ13219 1627 aa30.76■■■□□ 2.51
ARHGEF1-223ENST00000617585 PKD1L3Q7Z443 1732 aa30.76■■■□□ 2.51
ARHGEF1-223ENST00000617585 TATP17735 454 aaPredicted RBP30.75■■■□□ 2.51
ARHGEF1-223ENST00000617585 KIF7Q2M1P5 1343 aa30.73■■■□□ 2.51
ARHGEF1-223ENST00000617585 PPM1GO15355 546 aaPredicted RBP30.72■■■□□ 2.51
ARHGEF1-223ENST00000617585 LY75O60449 1722 aa30.71■■■□□ 2.51
ARHGEF1-223ENST00000617585 PRIM1P49642 420 aaKnown RBP30.69■■■□□ 2.5
ARHGEF1-223ENST00000617585 SLC15A2Q16348 729 aa30.69■■■□□ 2.5
ARHGEF1-223ENST00000617585 EYA1Q99502 592 aa30.69■■■□□ 2.5
ARHGEF1-223ENST00000617585 PCDH11XQ9BZA7 1347 aa30.69■■■□□ 2.5
ARHGEF1-223ENST00000617585 PCDH11YQ9BZA8 1340 aa30.69■■■□□ 2.5
ARHGEF1-223ENST00000617585 STK32BQ9NY57 414 aa30.67■■■□□ 2.5
ARHGEF1-223ENST00000617585 PLEKHG2Q9H7P9 1386 aa30.66■■■□□ 2.5
ARHGEF1-223ENST00000617585 SPON1Q9HCB6 807 aa30.66■■■□□ 2.5
ARHGEF1-223ENST00000617585 KNSTRNQ9Y448 316 aa30.66■■■□□ 2.5
ARHGEF1-223ENST00000617585 TNNT2P45379 298 aaPredicted RBP30.65■■■□□ 2.5
ARHGEF1-223ENST00000617585 EIF4A2Q14240 407 aaKnown RBP30.65■■■□□ 2.5
ARHGEF1-223ENST00000617585 SLC27A3Q5K4L6 730 aa30.65■■■□□ 2.5
ARHGEF1-223ENST00000617585 LRRC4BQ9NT99 713 aa30.65■■■□□ 2.5
ARHGEF1-223ENST00000617585 CYP27B1O15528 508 aa30.64■■■□□ 2.5
ARHGEF1-223ENST00000617585 AMER1Q5JTC6 1135 aaPredicted RBP30.64■■■□□ 2.5
ARHGEF1-223ENST00000617585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.64■■■□□ 2.5
ARHGEF1-223ENST00000617585 QSER1Q2KHR3 1735 aa30.63■■■□□ 2.49
ARHGEF1-223ENST00000617585 ITGB4P16144 1822 aa30.62■■■□□ 2.49
ARHGEF1-223ENST00000617585 MORC1Q86VD1 984 aa30.62■■■□□ 2.49
ARHGEF1-223ENST00000617585 SYTL4Q96C24 671 aaPredicted RBP30.62■■■□□ 2.49
ARHGEF1-223ENST00000617585 TOGARAM1Q9Y4F4 1720 aa30.61■■■□□ 2.49
ARHGEF1-223ENST00000617585 PER1O15534 1290 aaPredicted RBP30.61■■■□□ 2.49
ARHGEF1-223ENST00000617585 NKX1-1Q15270 411 aaPredicted RBP30.61■■■□□ 2.49
ARHGEF1-223ENST00000617585 PDGFDQ9GZP0 370 aaPredicted RBP30.61■■■□□ 2.49
ARHGEF1-223ENST00000617585 IGSF1Q8N6C5 1336 aa30.59■■■□□ 2.49
ARHGEF1-223ENST00000617585 SPG7Q9UQ90 795 aa30.59■■■□□ 2.49
ARHGEF1-223ENST00000617585 AKT1S1Q96B36 256 aa30.57■■■□□ 2.48
ARHGEF1-223ENST00000617585 ZNF827Q17R98 1081 aa30.54■■■□□ 2.48
ARHGEF1-223ENST00000617585 TUBGCP6Q96RT7 1819 aa30.53■■■□□ 2.48
ARHGEF1-223ENST00000617585 PTGER2P43116 358 aa30.51■■■□□ 2.47
ARHGEF1-223ENST00000617585 NPC1L1Q9UHC9 1359 aa30.51■■■□□ 2.47
ARHGEF1-223ENST00000617585 MTFR1LQ9H019 292 aa30.5■■■□□ 2.47
ARHGEF1-223ENST00000617585 COL24A1Q17RW2 1714 aa30.5■■■□□ 2.47
ARHGEF1-223ENST00000617585 TAF1LQ8IZX4 1826 aa30.5■■■□□ 2.47
ARHGEF1-223ENST00000617585 ZBTB7AO95365 584 aa30.49■■■□□ 2.47
ARHGEF1-223ENST00000617585 IFNL2Q8IZJ0 200 aa30.49■■■□□ 2.47
ARHGEF1-223ENST00000617585 PHKG2P15735 406 aa30.48■■■□□ 2.47
ARHGEF1-223ENST00000617585 SGIP1Q9BQI5 828 aa30.48■■■□□ 2.47
ARHGEF1-223ENST00000617585 CCNL1Q9UK58 526 aaPredicted RBP30.48■■■□□ 2.47
ARHGEF1-223ENST00000617585 C5P01031 1676 aa30.46■■■□□ 2.47
ARHGEF1-223ENST00000617585 HMGB2P26583 209 aaKnown RBP30.46■■■□□ 2.47
ARHGEF1-223ENST00000617585 MPRIPQ6WCQ1 1025 aa30.46■■■□□ 2.47
ARHGEF1-223ENST00000617585 PPP1R1BQ9UD71 204 aaPredicted RBP30.46■■■□□ 2.47
ARHGEF1-223ENST00000617585 KDRP35968 1356 aa30.45■■■□□ 2.47
ARHGEF1-223ENST00000617585 IL13P35225 146 aa30.45■■■□□ 2.47
ARHGEF1-223ENST00000617585 KCNQ4P56696 695 aa30.45■■■□□ 2.47
ARHGEF1-223ENST00000617585 PALLDQ8WX93 1383 aa30.44■■■□□ 2.46
ARHGEF1-223ENST00000617585 SLC16A10Q8TF71 515 aa30.44■■■□□ 2.46
ARHGEF1-223ENST00000617585 PIGBQ92521 554 aa30.44■■■□□ 2.46
ARHGEF1-223ENST00000617585 SMARCC1Q92922 1105 aaPredicted RBP30.44■■■□□ 2.46
ARHGEF1-223ENST00000617585 ATF5Q9Y2D1 282 aaPredicted RBP30.44■■■□□ 2.46
ARHGEF1-223ENST00000617585 PNPLA7Q6ZV29 1317 aa30.43■■■□□ 2.46
ARHGEF1-223ENST00000617585 AMOTQ4VCS5 1084 aa30.41■■■□□ 2.46
ARHGEF1-223ENST00000617585 MTHFSP49914 203 aa30.4■■■□□ 2.46
ARHGEF1-223ENST00000617585 PLEKHO1Q53GL0 409 aaPredicted RBP30.4■■■□□ 2.46
ARHGEF1-223ENST00000617585 TFCP2L1Q9NZI6 479 aa30.4■■■□□ 2.46
ARHGEF1-223ENST00000617585 AEBP1Q8IUX7 1158 aa30.38■■■□□ 2.45
ARHGEF1-223ENST00000617585 HSP90AB1P08238 724 aaKnown RBP30.37■■■□□ 2.45
ARHGEF1-223ENST00000617585 CC2D1BQ5T0F9 858 aaKnown RBP30.37■■■□□ 2.45
ARHGEF1-223ENST00000617585 TMOD3Q9NYL9 352 aa30.37■■■□□ 2.45
ARHGEF1-223ENST00000617585 SULT6B1Q6IMI4 303 aa30.36■■■□□ 2.45
ARHGEF1-223ENST00000617585 ERVV-2B6SEH9 535 aa30.35■■■□□ 2.45
ARHGEF1-223ENST00000617585 DCAF5Q96JK2 942 aa30.35■■■□□ 2.45
ARHGEF1-223ENST00000617585 C4BP0C0L5 1744 aa30.35■■■□□ 2.45
ARHGEF1-223ENST00000617585 ZNF831Q5JPB2 1677 aa30.34■■■□□ 2.45
ARHGEF1-223ENST00000617585 KDM6AO15550 1401 aaPredicted RBP30.32■■■□□ 2.44
ARHGEF1-223ENST00000617585 ZNF530Q6P9A1 599 aaPredicted RBP30.32■■■□□ 2.44
ARHGEF1-223ENST00000617585 UBR3Q6ZT12 1888 aa30.31■■■□□ 2.44
ARHGEF1-223ENST00000617585 MAP3K5Q99683 1374 aa30.31■■■□□ 2.44
ARHGEF1-223ENST00000617585 ASAP1Q9ULH1 1129 aa30.31■■■□□ 2.44
ARHGEF1-223ENST00000617585 LOC102724428A0A0B4J2F2 783 aa30.3■■■□□ 2.44
ARHGEF1-223ENST00000617585 SIK1P57059 783 aa30.3■■■□□ 2.44
ARHGEF1-223ENST00000617585 ARXQ96QS3 562 aa30.3■■■□□ 2.44
ARHGEF1-223ENST00000617585 ATG3Q9NT62 314 aa30.3■■■□□ 2.44
ARHGEF1-223ENST00000617585 SCN11AQ9UI33 1791 aa30.3■■■□□ 2.44
ARHGEF1-223ENST00000617585 COL23A1Q86Y22 540 aaPredicted RBP30.29■■■□□ 2.44
ARHGEF1-223ENST00000617585 COL3A1P02461 1466 aaPredicted RBP30.29■■■□□ 2.44
ARHGEF1-223ENST00000617585 DIAPH1O60610 1272 aaKnown RBP30.28■■■□□ 2.44
ARHGEF1-223ENST00000617585 FLAD1Q8NFF5 587 aa30.28■■■□□ 2.44
ARHGEF1-223ENST00000617585 FHDC1Q9C0D6 1143 aaPredicted RBP30.28■■■□□ 2.44
ARHGEF1-223ENST00000617585 SYT17Q9BSW7 474 aa30.27■■■□□ 2.44
ARHGEF1-223ENST00000617585 VIRMAQ69YN4 1812 aaKnown RBP30.25■■■□□ 2.43
ARHGEF1-223ENST00000617585 C1orf141Q5JVX7 400 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms