RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 DDX11Q96FC9 970 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 WDR70Q9NW82 654 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 SYCE3A1L190 88 aa7.02□□□□□ -1.29
RFX3-212ENST00000617270 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.02□□□□□ -1.29
RFX3-212ENST00000617270 KIF5CO60282 957 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 MPHOSPH8Q99549 860 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 SMTNL1A8MU46 457 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 GNAI2P04899 355 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 LIG1P18858 919 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 AACSQ86V21 672 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 VPS36Q86VN1 386 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 K7ELQ4 463 aaPredicted RBP7.01□□□□□ -1.29
RFX3-212ENST00000617270 CASQ1P31415 396 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 GTF2F1P35269 517 aaKnown RBP eCLIP7.01□□□□□ -1.29
RFX3-212ENST00000617270 JAKMIP1Q96N16 626 aaKnown RBP7.01□□□□□ -1.29
RFX3-212ENST00000617270 CCDC18Q5T9S5 1454 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 FERP16591 822 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 NLRP6P59044 892 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 CACNA2D4Q7Z3S7 1137 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 AAMPQ13685 434 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 ANKRD18BA2A2Z9 1011 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 PABPN1LA6NDY0 278 aaKnown RBP7.01□□□□□ -1.29
RFX3-212ENST00000617270 RRP9O43818 475 aaKnown RBP7.01□□□□□ -1.29
RFX3-212ENST00000617270 ATP2C2O75185 946 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 PPP4R3AQ6IN85 833 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 CABP2Q9NPB3 220 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 SPECC1Q5M775 1068 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 FKBP15Q5T1M5 1219 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 HOMER2Q9NSB8 354 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 CCDC96Q2M329 555 aa7.01□□□□□ -1.29
RFX3-212ENST00000617270 CWC27Q6UX04 472 aaKnown RBP7□□□□□ -1.29
RFX3-212ENST00000617270 HLTFQ14527 1009 aaKnown RBP eCLIP7□□□□□ -1.29
RFX3-212ENST00000617270 PTPN14Q15678 1187 aa7□□□□□ -1.29
RFX3-212ENST00000617270 KIF4BQ2VIQ3 1234 aa7□□□□□ -1.29
RFX3-212ENST00000617270 MICALCLQ6ZW33 695 aa7□□□□□ -1.29
RFX3-212ENST00000617270 MAATS1Q7Z4T9 603 aa7□□□□□ -1.29
RFX3-212ENST00000617270 FERMT3Q86UX7 667 aa7□□□□□ -1.29
RFX3-212ENST00000617270 SRRTQ9BXP5 876 aaKnown RBP7□□□□□ -1.29
RFX3-212ENST00000617270 ESPNB1AK53 854 aa7□□□□□ -1.29
RFX3-212ENST00000617270 ZSCAN12O43309 604 aa7□□□□□ -1.29
RFX3-212ENST00000617270 BLOC1S2Q6QNY1 142 aa7□□□□□ -1.29
RFX3-212ENST00000617270 APBB1IPQ7Z5R6 666 aaPredicted RBP7□□□□□ -1.29
RFX3-212ENST00000617270 NUP88Q99567 741 aaPredicted RBP7□□□□□ -1.29
RFX3-212ENST00000617270 FEZ1Q99689 392 aa7□□□□□ -1.29
RFX3-212ENST00000617270 MIA2Q96PC5 1412 aa7□□□□□ -1.29
RFX3-212ENST00000617270 MAP3K11Q16584 847 aa7□□□□□ -1.29
RFX3-212ENST00000617270 SPTY2D1Q68D10 685 aaPredicted RBP7□□□□□ -1.29
RFX3-212ENST00000617270 CFAP57Q96MR6 1250 aa7□□□□□ -1.29
RFX3-212ENST00000617270 BMS1Q14692 1282 aaKnown RBP7□□□□□ -1.29
RFX3-212ENST00000617270 TWISTNBQ3B726 338 aaPredicted RBP7□□□□□ -1.29
RFX3-212ENST00000617270 TDRD12Q587J7 1177 aaKnown RBP7□□□□□ -1.29
RFX3-212ENST00000617270 DNAI2Q9GZS0 605 aa7□□□□□ -1.29
RFX3-212ENST00000617270 SEC63Q9UGP8 760 aaKnown RBP7□□□□□ -1.29
RFX3-212ENST00000617270 URI1O94763 535 aaPredicted RBP7□□□□□ -1.29
RFX3-212ENST00000617270 SLC4A2P04920 1241 aa7□□□□□ -1.29
RFX3-212ENST00000617270 MYL6BP14649 208 aa7□□□□□ -1.29
RFX3-212ENST00000617270 ARL1P40616 181 aaPredicted RBP7□□□□□ -1.29
RFX3-212ENST00000617270 TMEM87AQ8NBN3 555 aa7□□□□□ -1.29
RFX3-212ENST00000617270 CCDC85AQ96PX6 553 aaPredicted RBP7□□□□□ -1.29
RFX3-212ENST00000617270 PPP6R1Q9UPN7 881 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 FHOD3Q2V2M9 1422 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 PRPF4BQ13523 1007 aaKnown RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 TNIP1Q15025 636 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 PPP1R14CQ8TAE6 165 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 WASF1Q92558 559 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 TSR2Q969E8 191 aaKnown RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 TSG101Q99816 390 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 NOB1Q9ULX3 412 aaKnown RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 CASTP20810 708 aaKnown RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 C6orf163Q5TEZ5 329 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 CTR9Q6PD62 1173 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 SMARCC1Q92922 1105 aaPredicted RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 DRC1Q96MC2 740 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 PRKAR2BP31323 418 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 EXOSC9Q06265 439 aaKnown RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 HDGFL1Q5TGJ6 251 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 ZSCAN25Q6NSZ9 544 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 GIGYF2Q6Y7W6 1299 aaKnown RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 BICDL1Q6ZP65 573 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 CPLX3Q8WVH0 158 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 FSD2A1L4K1 749 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 SPECC1LQ69YQ0 1117 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 CCDC160A6NGH7 325 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 IDH1O75874 414 aaKnown RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 MRPS9P82933 396 aaKnown RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 AEBP2Q6ZN18 517 aaPredicted RBP6.99□□□□□ -1.29
RFX3-212ENST00000617270 CCDC150Q8NCX0 1101 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 GCC1Q96CN9 775 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 LRP2BPQ9P2M1 347 aa6.99□□□□□ -1.29
RFX3-212ENST00000617270 SMG6Q86US8 1419 aaKnown RBP6.98□□□□□ -1.29
RFX3-212ENST00000617270 FBF1Q8TES7 1133 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 AIDAQ96BJ3 306 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 TIGD1Q96MW7 591 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 ZWINTO95229 277 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 TRMT1LQ7Z2T5 733 aaKnown RBP6.98□□□□□ -1.29
RFX3-212ENST00000617270 KIF2AO00139 706 aaPredicted RBP6.98□□□□□ -1.29
RFX3-212ENST00000617270 TCP11L2Q8N4U5 519 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 GAS2L2Q8NHY3 880 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 TSNARE1Q96NA8 513 aa6.98□□□□□ -1.29
RFX3-212ENST00000617270 CLIP2Q9UDT6 1046 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms