RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 RGPD3A6NKT7 1758 aaPredicted RBP21.08■□□□□ 0.96
SRGAP2C-205ENST00000617209 RGPD4Q7Z3J3 1758 aa21.08■□□□□ 0.96
SRGAP2C-205ENST00000617209 EIF4A2Q14240 407 aaKnown RBP21.07■□□□□ 0.96
SRGAP2C-205ENST00000617209 DDX54Q8TDD1 881 aaKnown RBP21.07■□□□□ 0.96
SRGAP2C-205ENST00000617209 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
SRGAP2C-205ENST00000617209 PTF1AQ7RTS3 328 aa21.06■□□□□ 0.96
SRGAP2C-205ENST00000617209 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
SRGAP2C-205ENST00000617209 RREB1Q92766 1687 aa21.05■□□□□ 0.96
SRGAP2C-205ENST00000617209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.04■□□□□ 0.96
SRGAP2C-205ENST00000617209 PLEKHG2Q9H7P9 1386 aa21.04■□□□□ 0.96
SRGAP2C-205ENST00000617209 KCNQ2O43526 872 aa21.03■□□□□ 0.96
SRGAP2C-205ENST00000617209 CC2D1BQ5T0F9 858 aaKnown RBP21.03■□□□□ 0.96
SRGAP2C-205ENST00000617209 IGSF1Q8N6C5 1336 aa21.03■□□□□ 0.96
SRGAP2C-205ENST00000617209 ACSBG1Q96GR2 724 aa21.01■□□□□ 0.95
SRGAP2C-205ENST00000617209 PKD1L3Q7Z443 1732 aa21.01■□□□□ 0.95
SRGAP2C-205ENST00000617209 MTHFSP49914 203 aa21■□□□□ 0.95
SRGAP2C-205ENST00000617209 PCDH11XQ9BZA7 1347 aa21■□□□□ 0.95
SRGAP2C-205ENST00000617209 PCDH11YQ9BZA8 1340 aa21■□□□□ 0.95
SRGAP2C-205ENST00000617209 NUP188Q5SRE5 1749 aa20.99■□□□□ 0.95
SRGAP2C-205ENST00000617209 PROM2Q8N271 834 aa20.99■□□□□ 0.95
SRGAP2C-205ENST00000617209 SPG7Q9UQ90 795 aa20.99■□□□□ 0.95
SRGAP2C-205ENST00000617209 BTAF1O14981 1849 aa20.99■□□□□ 0.95
SRGAP2C-205ENST00000617209 CYP27B1O15528 508 aa20.98■□□□□ 0.95
SRGAP2C-205ENST00000617209 IL13P35225 146 aa20.98■□□□□ 0.95
SRGAP2C-205ENST00000617209 ZEB1P37275 1124 aaPredicted RBP20.98■□□□□ 0.95
SRGAP2C-205ENST00000617209 NBPF14Q5TI25 921 aa20.97■□□□□ 0.95
SRGAP2C-205ENST00000617209 NKX1-1Q15270 411 aaPredicted RBP20.96■□□□□ 0.95
SRGAP2C-205ENST00000617209 PRIM1P49642 420 aaKnown RBP20.95■□□□□ 0.94
SRGAP2C-205ENST00000617209 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
SRGAP2C-205ENST00000617209 TXNRD1Q16881 649 aa20.94■□□□□ 0.94
SRGAP2C-205ENST00000617209 KDRP35968 1356 aa20.94■□□□□ 0.94
SRGAP2C-205ENST00000617209 R3HDM1Q15032 1099 aaKnown RBP20.92■□□□□ 0.94
SRGAP2C-205ENST00000617209 PSDA5PKW4 1024 aaPredicted RBP20.91■□□□□ 0.94
SRGAP2C-205ENST00000617209 DIAPH1O60610 1272 aaKnown RBP20.91■□□□□ 0.94
SRGAP2C-205ENST00000617209 AMOTQ4VCS5 1084 aa20.91■□□□□ 0.94
SRGAP2C-205ENST00000617209 IFNL2Q8IZJ0 200 aa20.91■□□□□ 0.94
SRGAP2C-205ENST00000617209 SYTL4Q96C24 671 aaPredicted RBP20.91■□□□□ 0.94
SRGAP2C-205ENST00000617209 PLEKHO1Q53GL0 409 aaPredicted RBP20.9■□□□□ 0.94
SRGAP2C-205ENST00000617209 SULT6B1Q6IMI4 303 aa20.9■□□□□ 0.94
SRGAP2C-205ENST00000617209 PHKG2P15735 406 aa20.89■□□□□ 0.93
SRGAP2C-205ENST00000617209 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.93
SRGAP2C-205ENST00000617209 AEBP1Q8IUX7 1158 aa20.89■□□□□ 0.93
SRGAP2C-205ENST00000617209 ITGB4P16144 1822 aa20.89■□□□□ 0.93
SRGAP2C-205ENST00000617209 SLC27A3Q5K4L6 730 aa20.88■□□□□ 0.93
SRGAP2C-205ENST00000617209 COL3A1P02461 1466 aaPredicted RBP20.87■□□□□ 0.93
SRGAP2C-205ENST00000617209 LY75O60449 1722 aa20.87■□□□□ 0.93
SRGAP2C-205ENST00000617209 PPP2R1AP30153 589 aa20.86■□□□□ 0.93
SRGAP2C-205ENST00000617209 TOGARAM1Q9Y4F4 1720 aa20.86■□□□□ 0.93
SRGAP2C-205ENST00000617209 HSP90AB1P08238 724 aaKnown RBP20.85■□□□□ 0.93
SRGAP2C-205ENST00000617209 MPRIPQ6WCQ1 1025 aa20.84■□□□□ 0.93
SRGAP2C-205ENST00000617209 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
SRGAP2C-205ENST00000617209 ANO8Q9HCE9 1232 aaPredicted RBP20.84■□□□□ 0.93
SRGAP2C-205ENST00000617209 LRRC4BQ9NT99 713 aa20.84■□□□□ 0.93
SRGAP2C-205ENST00000617209 SRCAPQ6ZRS2 3230 aa20.83■□□□□ 0.93
SRGAP2C-205ENST00000617209 SLC15A2Q16348 729 aa20.83■□□□□ 0.93
SRGAP2C-205ENST00000617209 DCAF5Q96JK2 942 aa20.83■□□□□ 0.93
SRGAP2C-205ENST00000617209 STK32BQ9NY57 414 aa20.83■□□□□ 0.93
SRGAP2C-205ENST00000617209 HMGB2P26583 209 aaKnown RBP20.82■□□□□ 0.92
SRGAP2C-205ENST00000617209 ZNF530Q6P9A1 599 aaPredicted RBP20.82■□□□□ 0.92
SRGAP2C-205ENST00000617209 PIGBQ92521 554 aa20.82■□□□□ 0.92
SRGAP2C-205ENST00000617209 LRP5O75197 1615 aa20.82■□□□□ 0.92
SRGAP2C-205ENST00000617209 PAPPAQ13219 1627 aa20.82■□□□□ 0.92
SRGAP2C-205ENST00000617209 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
SRGAP2C-205ENST00000617209 HMOX1P09601 288 aa20.81■□□□□ 0.92
SRGAP2C-205ENST00000617209 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
SRGAP2C-205ENST00000617209 SMARCC1Q92922 1105 aaPredicted RBP20.81■□□□□ 0.92
SRGAP2C-205ENST00000617209 C1orf141Q5JVX7 400 aa20.79■□□□□ 0.92
SRGAP2C-205ENST00000617209 TMOD3Q9NYL9 352 aa20.79■□□□□ 0.92
SRGAP2C-205ENST00000617209 U2SURPO15042 1029 aaKnown RBP20.78■□□□□ 0.92
SRGAP2C-205ENST00000617209 NUDCQ9Y266 331 aa20.78■□□□□ 0.92
SRGAP2C-205ENST00000617209 AKAP4Q5JQC9 854 aa20.77■□□□□ 0.92
SRGAP2C-205ENST00000617209 AKT1S1Q96B36 256 aa20.77■□□□□ 0.92
SRGAP2C-205ENST00000617209 CCNL1Q9UK58 526 aaPredicted RBP20.77■□□□□ 0.92
SRGAP2C-205ENST00000617209 CASZ1Q86V15 1759 aa20.77■□□□□ 0.91
SRGAP2C-205ENST00000617209 PALLDQ8WX93 1383 aa20.76■□□□□ 0.91
SRGAP2C-205ENST00000617209 RALBP1Q15311 655 aa20.76■□□□□ 0.91
SRGAP2C-205ENST00000617209 SCN11AQ9UI33 1791 aa20.75■□□□□ 0.91
SRGAP2C-205ENST00000617209 KDM6AO15550 1401 aaPredicted RBP20.75■□□□□ 0.91
SRGAP2C-205ENST00000617209 QSER1Q2KHR3 1735 aa20.75■□□□□ 0.91
SRGAP2C-205ENST00000617209 MTHFSDQ2M296 383 aaKnown RBP20.74■□□□□ 0.91
SRGAP2C-205ENST00000617209 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
SRGAP2C-205ENST00000617209 KCNQ4P56696 695 aa20.73■□□□□ 0.91
SRGAP2C-205ENST00000617209 ZNF827Q17R98 1081 aa20.73■□□□□ 0.91
SRGAP2C-205ENST00000617209 SPON1Q9HCB6 807 aa20.73■□□□□ 0.91
SRGAP2C-205ENST00000617209 ASAP1Q9ULH1 1129 aa20.73■□□□□ 0.91
SRGAP2C-205ENST00000617209 FCHSD2O94868 740 aa20.72■□□□□ 0.91
SRGAP2C-205ENST00000617209 CABP4P57796 275 aa20.72■□□□□ 0.91
SRGAP2C-205ENST00000617209 ATG3Q9NT62 314 aa20.72■□□□□ 0.91
SRGAP2C-205ENST00000617209 C5P01031 1676 aa20.71■□□□□ 0.91
SRGAP2C-205ENST00000617209 PDGFDQ9GZP0 370 aaPredicted RBP20.71■□□□□ 0.91
SRGAP2C-205ENST00000617209 RSPH6AQ9H0K4 717 aa20.71■□□□□ 0.91
SRGAP2C-205ENST00000617209 VIRMAQ69YN4 1812 aaKnown RBP20.71■□□□□ 0.91
SRGAP2C-205ENST00000617209 LOC102724428A0A0B4J2F2 783 aa20.7■□□□□ 0.9
SRGAP2C-205ENST00000617209 SIK1P57059 783 aa20.7■□□□□ 0.9
SRGAP2C-205ENST00000617209 NFATC2IPQ8NCF5 419 aa20.7■□□□□ 0.9
SRGAP2C-205ENST00000617209 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.9
SRGAP2C-205ENST00000617209 ADAMTS7Q9UKP4 1686 aa20.7■□□□□ 0.9
SRGAP2C-205ENST00000617209 U2AF1L5P0DN76 240 aaPredicted RBP20.69■□□□□ 0.9
SRGAP2C-205ENST00000617209 U2AF1Q01081 240 aaKnown RBP eCLIP20.69■□□□□ 0.9
SRGAP2C-205ENST00000617209 GAS2L2Q8NHY3 880 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms