RNA–Protein interactions for RNA: ENST00000614775.4

SMIM20-205, Transcript of small integral membrane protein 20, humanhuman

TSL 5 BASIC

Gene SMIM20, Length 1,190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-205ENST00000614775 CCNL1Q9UK58 526 aaPredicted RBP26.09■■□□□ 1.77
SMIM20-205ENST00000614775 USP54Q70EL1 1684 aa26.09■■□□□ 1.77
SMIM20-205ENST00000614775 USP31Q70CQ4 1352 aa26.07■■□□□ 1.76
SMIM20-205ENST00000614775 KTN1Q86UP2 1357 aaKnown RBP26.07■■□□□ 1.76
SMIM20-205ENST00000614775 MON2Q7Z3U7 1717 aa26.05■■□□□ 1.76
SMIM20-205ENST00000614775 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.01■■□□□ 1.75
SMIM20-205ENST00000614775 IGSF1Q8N6C5 1336 aa26■■□□□ 1.75
SMIM20-205ENST00000614775 COL13A1Q5TAT6 717 aaPredicted RBP26■■□□□ 1.75
SMIM20-205ENST00000614775 C5P01031 1676 aa25.99■■□□□ 1.75
SMIM20-205ENST00000614775 NME9Q86XW9 330 aa25.99■■□□□ 1.75
SMIM20-205ENST00000614775 WWC3Q9ULE0 1092 aa25.99■■□□□ 1.75
SMIM20-205ENST00000614775 FAM208AQ9UK61 1670 aaKnown RBP25.99■■□□□ 1.75
SMIM20-205ENST00000614775 USP47Q96K76 1375 aa25.97■■□□□ 1.75
SMIM20-205ENST00000614775 TOMM70O94826 608 aa25.97■■□□□ 1.75
SMIM20-205ENST00000614775 CICQ96RK0 1608 aaPredicted RBP25.96■■□□□ 1.75
SMIM20-205ENST00000614775 CAPN15O75808 1086 aa25.96■■□□□ 1.75
SMIM20-205ENST00000614775 WDR90Q96KV7 1748 aa25.95■■□□□ 1.74
SMIM20-205ENST00000614775 FLAD1Q8NFF5 587 aa25.95■■□□□ 1.74
SMIM20-205ENST00000614775 SBNO2Q9Y2G9 1366 aa25.95■■□□□ 1.74
SMIM20-205ENST00000614775 TAF1LQ8IZX4 1826 aa25.93■■□□□ 1.74
SMIM20-205ENST00000614775 IP6K1Q92551 441 aa25.92■■□□□ 1.74
SMIM20-205ENST00000614775 ZCRB1Q8TBF4 217 aaKnown RBP25.91■■□□□ 1.74
SMIM20-205ENST00000614775 LTV1Q96GA3 475 aaPredicted RBP25.91■■□□□ 1.74
SMIM20-205ENST00000614775 CD163L1Q9NR16 1453 aa25.91■■□□□ 1.74
SMIM20-205ENST00000614775 JMYQ8N9B5 988 aa25.9■■□□□ 1.74
SMIM20-205ENST00000614775 MEGF6O75095 1541 aa25.89■■□□□ 1.74
SMIM20-205ENST00000614775 TOGARAM1Q9Y4F4 1720 aa25.88■■□□□ 1.73
SMIM20-205ENST00000614775 PRELPP51888 382 aa25.88■■□□□ 1.73
SMIM20-205ENST00000614775 KLRG1Q96E93 195 aa25.88■■□□□ 1.73
SMIM20-205ENST00000614775 C4BP0C0L5 1744 aa25.86■■□□□ 1.73
SMIM20-205ENST00000614775 AMIGO3Q86WK7 504 aa25.86■■□□□ 1.73
SMIM20-205ENST00000614775 TNS4Q8IZW8 715 aa25.86■■□□□ 1.73
SMIM20-205ENST00000614775 RGPD2P0DJD1 1756 aa25.86■■□□□ 1.73
SMIM20-205ENST00000614775 HMGB2P26583 209 aaKnown RBP25.85■■□□□ 1.73
SMIM20-205ENST00000614775 HTRA3P83110 453 aa25.85■■□□□ 1.73
SMIM20-205ENST00000614775 NMRK2Q9NPI5 230 aa25.85■■□□□ 1.73
SMIM20-205ENST00000614775 PALLDQ8WX93 1383 aa25.83■■□□□ 1.73
SMIM20-205ENST00000614775 UBR3Q6ZT12 1888 aa25.83■■□□□ 1.73
SMIM20-205ENST00000614775 EDC4Q6P2E9 1401 aaKnown RBP25.82■■□□□ 1.72
SMIM20-205ENST00000614775 RBM46Q8TBY0 533 aaKnown RBP25.82■■□□□ 1.72
SMIM20-205ENST00000614775 AK7Q96M32 723 aa25.81■■□□□ 1.72
SMIM20-205ENST00000614775 SMIM5Q71RC9 77 aa25.8■■□□□ 1.72
SMIM20-205ENST00000614775 PHF14O94880 888 aa25.79■■□□□ 1.72
SMIM20-205ENST00000614775 KIAA1551Q9HCM1 1747 aa25.78■■□□□ 1.72
SMIM20-205ENST00000614775 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.78■■□□□ 1.72
SMIM20-205ENST00000614775 HOXC9P31274 260 aa25.78■■□□□ 1.72
SMIM20-205ENST00000614775 HDGFL2Q7Z4V5 671 aaPredicted RBP25.78■■□□□ 1.72
SMIM20-205ENST00000614775 PXDNLA1KZ92 1463 aa25.78■■□□□ 1.72
SMIM20-205ENST00000614775 NSD3Q9BZ95 1437 aa25.77■■□□□ 1.72
SMIM20-205ENST00000614775 MAP3K19Q56UN5 1328 aa25.76■■□□□ 1.71
SMIM20-205ENST00000614775 ROCK2O75116 1388 aaKnown RBP25.76■■□□□ 1.71
SMIM20-205ENST00000614775 KIF13BQ9NQT8 1826 aa25.76■■□□□ 1.71
SMIM20-205ENST00000614775 CGNL1Q0VF96 1302 aa25.75■■□□□ 1.71
SMIM20-205ENST00000614775 TMC1Q8TDI8 760 aa25.75■■□□□ 1.71
SMIM20-205ENST00000614775 SSFA2P28290 1259 aa25.74■■□□□ 1.71
SMIM20-205ENST00000614775 FSTL1Q12841 308 aa25.74■■□□□ 1.71
SMIM20-205ENST00000614775 L3MBTL2Q969R5 705 aa25.74■■□□□ 1.71
SMIM20-205ENST00000614775 SLC12A5Q9H2X9 1139 aa25.74■■□□□ 1.71
SMIM20-205ENST00000614775 N4BP2Q86UW6 1770 aaPredicted RBP25.74■■□□□ 1.71
SMIM20-205ENST00000614775 A0A1W2PP64 1363 aa25.73■■□□□ 1.71
SMIM20-205ENST00000614775 MPRIPQ6WCQ1 1025 aa25.73■■□□□ 1.71
SMIM20-205ENST00000614775 C16orf71Q8IYS4 520 aaPredicted RBP25.73■■□□□ 1.71
SMIM20-205ENST00000614775 BCS1LQ9Y276 419 aa25.73■■□□□ 1.71
SMIM20-205ENST00000614775 AMPHP49418 695 aa25.72■■□□□ 1.71
SMIM20-205ENST00000614775 PCNTO95613 3336 aa25.72■■□□□ 1.71
SMIM20-205ENST00000614775 NBPF6Q5VWK0 638 aa25.71■■□□□ 1.71
SMIM20-205ENST00000614775 ARHGAP27Q6ZUM4 889 aa25.71■■□□□ 1.71
SMIM20-205ENST00000614775 NBPF4Q96M43 638 aa25.71■■□□□ 1.71
SMIM20-205ENST00000614775 ITGB4P16144 1822 aa25.7■■□□□ 1.71
SMIM20-205ENST00000614775 TRIM26Q12899 539 aaPredicted RBP25.7■■□□□ 1.7
SMIM20-205ENST00000614775 RAPGEF4Q8WZA2 1011 aa25.7■■□□□ 1.7
SMIM20-205ENST00000614775 SMARCC1Q92922 1105 aaPredicted RBP25.7■■□□□ 1.7
SMIM20-205ENST00000614775 PCDH11XQ9BZA7 1347 aa25.69■■□□□ 1.7
SMIM20-205ENST00000614775 PCDH11YQ9BZA8 1340 aa25.69■■□□□ 1.7
SMIM20-205ENST00000614775 FBLN1P23142 703 aa25.69■■□□□ 1.7
SMIM20-205ENST00000614775 TGFB2P61812 414 aa25.69■■□□□ 1.7
SMIM20-205ENST00000614775 USHBP1Q8N6Y0 703 aa25.69■■□□□ 1.7
SMIM20-205ENST00000614775 TERF2IPQ9NYB0 399 aa25.69■■□□□ 1.7
SMIM20-205ENST00000614775 MAP2P11137 1827 aaKnown RBP25.68■■□□□ 1.7
SMIM20-205ENST00000614775 MMP10P09238 476 aa25.68■■□□□ 1.7
SMIM20-205ENST00000614775 A0A0G2JLW4 131 aa25.67■■□□□ 1.7
SMIM20-205ENST00000614775 PLEKHG2Q9H7P9 1386 aa25.67■■□□□ 1.7
SMIM20-205ENST00000614775 LINC00116Q8NCU8 138 aa25.66■■□□□ 1.7
SMIM20-205ENST00000614775 TATP17735 454 aaPredicted RBP25.65■■□□□ 1.7
SMIM20-205ENST00000614775 C9orf131Q5VYM1 1079 aa25.65■■□□□ 1.7
SMIM20-205ENST00000614775 COG3Q96JB2 828 aa25.65■■□□□ 1.7
SMIM20-205ENST00000614775 BRCA1P38398 1863 aaKnown RBP25.65■■□□□ 1.7
SMIM20-205ENST00000614775 RTL1A6NKG5 1358 aa25.65■■□□□ 1.7
SMIM20-205ENST00000614775 PKD1L3Q7Z443 1732 aa25.65■■□□□ 1.7
SMIM20-205ENST00000614775 C10orf71Q711Q0 1435 aa25.64■■□□□ 1.7
SMIM20-205ENST00000614775 KCPQ6ZWJ8 1503 aa25.64■■□□□ 1.7
SMIM20-205ENST00000614775 CYP27B1O15528 508 aa25.63■■□□□ 1.69
SMIM20-205ENST00000614775 GNPATO15228 680 aa25.62■■□□□ 1.69
SMIM20-205ENST00000614775 FCHSD2O94868 740 aa25.62■■□□□ 1.69
SMIM20-205ENST00000614775 PIGBQ92521 554 aa25.62■■□□□ 1.69
SMIM20-205ENST00000614775 KDM2BQ8NHM5 1336 aa25.62■■□□□ 1.69
SMIM20-205ENST00000614775 LOC102724428A0A0B4J2F2 783 aa25.61■■□□□ 1.69
SMIM20-205ENST00000614775 HSPA1AP0DMV8 641 aaKnown RBP25.61■■□□□ 1.69
SMIM20-205ENST00000614775 HSPA1BP0DMV9 641 aaKnown RBP25.61■■□□□ 1.69
SMIM20-205ENST00000614775 DPEP1P16444 411 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms