RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 NOB1Q9ULX3 412 aaKnown RBP18.59■□□□□ 0.57
CDH1-213ENST00000612417 LTN1O94822 1766 aa18.59■□□□□ 0.57
CDH1-213ENST00000612417 BECN1Q14457 450 aa18.59■□□□□ 0.57
CDH1-213ENST00000612417 DDX17Q92841 729 aaKnown RBP18.59■□□□□ 0.57
CDH1-213ENST00000612417 TBC1D32Q96NH3 1257 aa18.59■□□□□ 0.57
CDH1-213ENST00000612417 UPF2Q9HAU5 1272 aaKnown RBP18.59■□□□□ 0.57
CDH1-213ENST00000612417 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.56
CDH1-213ENST00000612417 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.56
CDH1-213ENST00000612417 ITPRIPQ8IWB1 547 aa18.58■□□□□ 0.56
CDH1-213ENST00000612417 SMC5Q8IY18 1101 aa18.58■□□□□ 0.56
CDH1-213ENST00000612417 ZBTB40Q9NUA8 1239 aa18.58■□□□□ 0.56
CDH1-213ENST00000612417 TRPM3Q9HCF6 1732 aaPredicted RBP18.57■□□□□ 0.56
CDH1-213ENST00000612417 ARHGEF10O15013 1369 aa18.57■□□□□ 0.56
CDH1-213ENST00000612417 RGPD1P0DJD0 1748 aa18.57■□□□□ 0.56
CDH1-213ENST00000612417 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
CDH1-213ENST00000612417 EYA1Q99502 592 aa18.56■□□□□ 0.56
CDH1-213ENST00000612417 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
CDH1-213ENST00000612417 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
CDH1-213ENST00000612417 GCP02774 474 aa18.55■□□□□ 0.56
CDH1-213ENST00000612417 NFAT5O94916 1531 aa18.55■□□□□ 0.56
CDH1-213ENST00000612417 GSE1Q14687 1217 aa18.54■□□□□ 0.56
CDH1-213ENST00000612417 IP6K1Q92551 441 aa18.54■□□□□ 0.56
CDH1-213ENST00000612417 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
CDH1-213ENST00000612417 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
CDH1-213ENST00000612417 RTL1A6NKG5 1358 aa18.54■□□□□ 0.56
CDH1-213ENST00000612417 EIF5BO60841 1220 aaKnown RBP18.53■□□□□ 0.56
CDH1-213ENST00000612417 IGSF1Q8N6C5 1336 aa18.52■□□□□ 0.56
CDH1-213ENST00000612417 ANO8Q9HCE9 1232 aaPredicted RBP18.52■□□□□ 0.56
CDH1-213ENST00000612417 IFT57Q9NWB7 429 aa18.52■□□□□ 0.56
CDH1-213ENST00000612417 ARHGAP45Q92619 1136 aa18.51■□□□□ 0.55
CDH1-213ENST00000612417 SLAIN2Q9P270 581 aa18.51■□□□□ 0.55
CDH1-213ENST00000612417 FAM83GA6ND36 823 aa18.51■□□□□ 0.55
CDH1-213ENST00000612417 ZNF853P0CG23 659 aa18.51■□□□□ 0.55
CDH1-213ENST00000612417 GNAI1P63096 354 aa18.5■□□□□ 0.55
CDH1-213ENST00000612417 FRAT2O75474 233 aaPredicted RBP18.5■□□□□ 0.55
CDH1-213ENST00000612417 DCTN1Q14203 1278 aa18.5■□□□□ 0.55
CDH1-213ENST00000612417 BRINP3Q76B58 766 aa18.5■□□□□ 0.55
CDH1-213ENST00000612417 ARHGEF25Q86VW2 580 aa18.5■□□□□ 0.55
CDH1-213ENST00000612417 SLIT3O75094 1523 aa18.49■□□□□ 0.55
CDH1-213ENST00000612417 ALS2Q96Q42 1657 aa18.49■□□□□ 0.55
CDH1-213ENST00000612417 VAMP4O75379 141 aa18.49■□□□□ 0.55
CDH1-213ENST00000612417 KDRP35968 1356 aa18.49■□□□□ 0.55
CDH1-213ENST00000612417 CHMP4BQ9H444 224 aaKnown RBP18.49■□□□□ 0.55
CDH1-213ENST00000612417 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
CDH1-213ENST00000612417 ZC3H6P61129 1189 aaKnown RBP18.48■□□□□ 0.55
CDH1-213ENST00000612417 NUCB1Q02818 461 aa18.48■□□□□ 0.55
CDH1-213ENST00000612417 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
CDH1-213ENST00000612417 MTHFSDQ2M296 383 aaKnown RBP18.47■□□□□ 0.55
CDH1-213ENST00000612417 MRPL50Q8N5N7 158 aaKnown RBP18.47■□□□□ 0.55
CDH1-213ENST00000612417 MCM10Q7L590 875 aa18.46■□□□□ 0.55
CDH1-213ENST00000612417 TBC1D2Q9BYX2 928 aa18.46■□□□□ 0.55
CDH1-213ENST00000612417 TNS3Q68CZ2 1445 aa18.46■□□□□ 0.55
CDH1-213ENST00000612417 GAS2L2Q8NHY3 880 aa18.45■□□□□ 0.54
CDH1-213ENST00000612417 CFAP44Q96MT7 982 aa18.45■□□□□ 0.54
CDH1-213ENST00000612417 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
CDH1-213ENST00000612417 ABCC4O15439 1325 aa18.45■□□□□ 0.54
CDH1-213ENST00000612417 PXDNQ92626 1479 aa18.45■□□□□ 0.54
CDH1-213ENST00000612417 NBPF6Q5VWK0 638 aa18.45■□□□□ 0.54
CDH1-213ENST00000612417 CABLES1Q8TDN4 633 aa18.45■□□□□ 0.54
CDH1-213ENST00000612417 RTF1Q92541 710 aaKnown RBP18.45■□□□□ 0.54
CDH1-213ENST00000612417 NBPF4Q96M43 638 aa18.45■□□□□ 0.54
CDH1-213ENST00000612417 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
CDH1-213ENST00000612417 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
CDH1-213ENST00000612417 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
CDH1-213ENST00000612417 RGPD2P0DJD1 1756 aa18.44■□□□□ 0.54
CDH1-213ENST00000612417 MED1Q15648 1581 aaPredicted RBP18.43■□□□□ 0.54
CDH1-213ENST00000612417 LRRC59Q96AG4 307 aaKnown RBP18.43■□□□□ 0.54
CDH1-213ENST00000612417 C22orf23Q9BZE7 217 aa18.43■□□□□ 0.54
CDH1-213ENST00000612417 TSPYL6Q8N831 410 aa18.43■□□□□ 0.54
CDH1-213ENST00000612417 ANKRD24Q8TF21 1146 aa18.43■□□□□ 0.54
CDH1-213ENST00000612417 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
CDH1-213ENST00000612417 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
CDH1-213ENST00000612417 GCC1Q96CN9 775 aa18.42■□□□□ 0.54
CDH1-213ENST00000612417 AXIN2Q9Y2T1 843 aa18.42■□□□□ 0.54
CDH1-213ENST00000612417 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
CDH1-213ENST00000612417 SLKQ9H2G2 1235 aaPredicted RBP18.4■□□□□ 0.54
CDH1-213ENST00000612417 GNAT3A8MTJ3 354 aa18.39■□□□□ 0.53
CDH1-213ENST00000612417 ELL2O00472 640 aaPredicted RBP18.39■□□□□ 0.53
CDH1-213ENST00000612417 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
CDH1-213ENST00000612417 BMP2KLQ5H9B9 411 aa18.38■□□□□ 0.53
CDH1-213ENST00000612417 API5Q9BZZ5 524 aaKnown RBP18.38■□□□□ 0.53
CDH1-213ENST00000612417 SOS2Q07890 1332 aaPredicted RBP18.38■□□□□ 0.53
CDH1-213ENST00000612417 RBM25P49756 843 aaKnown RBP18.37■□□□□ 0.53
CDH1-213ENST00000612417 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
CDH1-213ENST00000612417 LNPKQ9C0E8 428 aa18.37■□□□□ 0.53
CDH1-213ENST00000612417 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
CDH1-213ENST00000612417 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
CDH1-213ENST00000612417 CHL1O00533 1208 aa18.36■□□□□ 0.53
CDH1-213ENST00000612417 HTATSF1O43719 755 aaKnown RBP18.36■□□□□ 0.53
CDH1-213ENST00000612417 MIS18AQ9NYP9 233 aa18.35■□□□□ 0.53
CDH1-213ENST00000612417 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
CDH1-213ENST00000612417 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
CDH1-213ENST00000612417 SIRT2Q8IXJ6 389 aa18.34■□□□□ 0.53
CDH1-213ENST00000612417 NLRP2Q9NX02 1062 aa18.34■□□□□ 0.53
CDH1-213ENST00000612417 ERBB3P21860 1342 aa18.34■□□□□ 0.53
CDH1-213ENST00000612417 CRB1P82279 1406 aa18.34■□□□□ 0.53
CDH1-213ENST00000612417 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
CDH1-213ENST00000612417 KIAA0232Q92628 1395 aa18.34■□□□□ 0.53
CDH1-213ENST00000612417 IL27Q8NEV9 243 aa18.33■□□□□ 0.52
CDH1-213ENST00000612417 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms