RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 TXNRD1Q16881 649 aa25.03■■□□□ 1.6
VCX3A-203ENST00000612369 MAP2P11137 1827 aaKnown RBP25.02■■□□□ 1.6
VCX3A-203ENST00000612369 PPM1GO15355 546 aaPredicted RBP25.02■■□□□ 1.6
VCX3A-203ENST00000612369 TATP17735 454 aaPredicted RBP25.01■■□□□ 1.59
VCX3A-203ENST00000612369 USHBP1Q8N6Y0 703 aa25.01■■□□□ 1.59
VCX3A-203ENST00000612369 POLKQ9UBT6 870 aa25.01■■□□□ 1.59
VCX3A-203ENST00000612369 KAT6BQ8WYB5 2073 aa25■■□□□ 1.59
VCX3A-203ENST00000612369 SHANK3Q9BYB0 1731 aa24.98■■□□□ 1.59
VCX3A-203ENST00000612369 KNSTRNQ9Y448 316 aa24.97■■□□□ 1.59
VCX3A-203ENST00000612369 BTAF1O14981 1849 aa24.97■■□□□ 1.59
VCX3A-203ENST00000612369 KIF7Q2M1P5 1343 aa24.96■■□□□ 1.59
VCX3A-203ENST00000612369 NCAPD2Q15021 1401 aa24.95■■□□□ 1.59
VCX3A-203ENST00000612369 TNNT2P45379 298 aaPredicted RBP24.95■■□□□ 1.58
VCX3A-203ENST00000612369 ANO8Q9HCE9 1232 aaPredicted RBP24.95■■□□□ 1.58
VCX3A-203ENST00000612369 PCDH11XQ9BZA7 1347 aa24.94■■□□□ 1.58
VCX3A-203ENST00000612369 PCDH11YQ9BZA8 1340 aa24.94■■□□□ 1.58
VCX3A-203ENST00000612369 STK32BQ9NY57 414 aa24.94■■□□□ 1.58
VCX3A-203ENST00000612369 PRIM1P49642 420 aaKnown RBP24.93■■□□□ 1.58
VCX3A-203ENST00000612369 SLC15A2Q16348 729 aa24.92■■□□□ 1.58
VCX3A-203ENST00000612369 MORC1Q86VD1 984 aa24.92■■□□□ 1.58
VCX3A-203ENST00000612369 SYTL4Q96C24 671 aaPredicted RBP24.92■■□□□ 1.58
VCX3A-203ENST00000612369 EYA1Q99502 592 aa24.92■■□□□ 1.58
VCX3A-203ENST00000612369 DOT1LQ8TEK3 1739 aa24.91■■□□□ 1.58
VCX3A-203ENST00000612369 SLC27A3Q5K4L6 730 aa24.9■■□□□ 1.58
VCX3A-203ENST00000612369 SPON1Q9HCB6 807 aa24.9■■□□□ 1.58
VCX3A-203ENST00000612369 EIF4A2Q14240 407 aaKnown RBP24.89■■□□□ 1.58
VCX3A-203ENST00000612369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.89■■□□□ 1.58
VCX3A-203ENST00000612369 SPG7Q9UQ90 795 aa24.88■■□□□ 1.57
VCX3A-203ENST00000612369 PLEKHG2Q9H7P9 1386 aa24.88■■□□□ 1.57
VCX3A-203ENST00000612369 PKD1L3Q7Z443 1732 aa24.87■■□□□ 1.57
VCX3A-203ENST00000612369 CYP27B1O15528 508 aa24.86■■□□□ 1.57
VCX3A-203ENST00000612369 AMER1Q5JTC6 1135 aaPredicted RBP24.86■■□□□ 1.57
VCX3A-203ENST00000612369 CASZ1Q86V15 1759 aa24.85■■□□□ 1.57
VCX3A-203ENST00000612369 LRRC4BQ9NT99 713 aa24.85■■□□□ 1.57
VCX3A-203ENST00000612369 PAPPAQ13219 1627 aa24.85■■□□□ 1.57
VCX3A-203ENST00000612369 PER1O15534 1290 aaPredicted RBP24.83■■□□□ 1.57
VCX3A-203ENST00000612369 NKX1-1Q15270 411 aaPredicted RBP24.83■■□□□ 1.57
VCX3A-203ENST00000612369 IGSF1Q8N6C5 1336 aa24.83■■□□□ 1.56
VCX3A-203ENST00000612369 LY75O60449 1722 aa24.81■■□□□ 1.56
VCX3A-203ENST00000612369 HMGB2P26583 209 aaKnown RBP24.81■■□□□ 1.56
VCX3A-203ENST00000612369 PDGFDQ9GZP0 370 aaPredicted RBP24.8■■□□□ 1.56
VCX3A-203ENST00000612369 IFNL2Q8IZJ0 200 aa24.79■■□□□ 1.56
VCX3A-203ENST00000612369 AKT1S1Q96B36 256 aa24.79■■□□□ 1.56
VCX3A-203ENST00000612369 PPP1R1BQ9UD71 204 aaPredicted RBP24.79■■□□□ 1.56
VCX3A-203ENST00000612369 ZNF827Q17R98 1081 aa24.77■■□□□ 1.56
VCX3A-203ENST00000612369 MPRIPQ6WCQ1 1025 aa24.77■■□□□ 1.56
VCX3A-203ENST00000612369 CCNL1Q9UK58 526 aaPredicted RBP24.77■■□□□ 1.56
VCX3A-203ENST00000612369 ZBTB7AO95365 584 aa24.76■■□□□ 1.55
VCX3A-203ENST00000612369 MTFR1LQ9H019 292 aa24.76■■□□□ 1.55
VCX3A-203ENST00000612369 NPC1L1Q9UHC9 1359 aa24.76■■□□□ 1.55
VCX3A-203ENST00000612369 PHKG2P15735 406 aa24.75■■□□□ 1.55
VCX3A-203ENST00000612369 SMARCC1Q92922 1105 aaPredicted RBP24.75■■□□□ 1.55
VCX3A-203ENST00000612369 TOGARAM1Q9Y4F4 1720 aa24.74■■□□□ 1.55
VCX3A-203ENST00000612369 ITGB4P16144 1822 aa24.74■■□□□ 1.55
VCX3A-203ENST00000612369 QSER1Q2KHR3 1735 aa24.73■■□□□ 1.55
VCX3A-203ENST00000612369 AMOTQ4VCS5 1084 aa24.73■■□□□ 1.55
VCX3A-203ENST00000612369 PLEKHO1Q53GL0 409 aaPredicted RBP24.73■■□□□ 1.55
VCX3A-203ENST00000612369 SLC16A10Q8TF71 515 aa24.73■■□□□ 1.55
VCX3A-203ENST00000612369 PALLDQ8WX93 1383 aa24.72■■□□□ 1.55
VCX3A-203ENST00000612369 IL13P35225 146 aa24.72■■□□□ 1.55
VCX3A-203ENST00000612369 PTGER2P43116 358 aa24.72■■□□□ 1.55
VCX3A-203ENST00000612369 CC2D1BQ5T0F9 858 aaKnown RBP24.72■■□□□ 1.55
VCX3A-203ENST00000612369 ATF5Q9Y2D1 282 aaPredicted RBP24.72■■□□□ 1.55
VCX3A-203ENST00000612369 HSP90AB1P08238 724 aaKnown RBP24.71■■□□□ 1.55
VCX3A-203ENST00000612369 MTHFSP49914 203 aa24.71■■□□□ 1.55
VCX3A-203ENST00000612369 KCNQ4P56696 695 aa24.71■■□□□ 1.55
VCX3A-203ENST00000612369 PIGBQ92521 554 aa24.71■■□□□ 1.55
VCX3A-203ENST00000612369 TFCP2L1Q9NZI6 479 aa24.71■■□□□ 1.55
VCX3A-203ENST00000612369 TMOD3Q9NYL9 352 aa24.7■■□□□ 1.54
VCX3A-203ENST00000612369 KDRP35968 1356 aa24.69■■□□□ 1.54
VCX3A-203ENST00000612369 PNPLA7Q6ZV29 1317 aa24.68■■□□□ 1.54
VCX3A-203ENST00000612369 SULT6B1Q6IMI4 303 aa24.68■■□□□ 1.54
VCX3A-203ENST00000612369 AEBP1Q8IUX7 1158 aa24.67■■□□□ 1.54
VCX3A-203ENST00000612369 DCAF5Q96JK2 942 aa24.67■■□□□ 1.54
VCX3A-203ENST00000612369 SGIP1Q9BQI5 828 aa24.67■■□□□ 1.54
VCX3A-203ENST00000612369 ERVV-2B6SEH9 535 aa24.66■■□□□ 1.54
VCX3A-203ENST00000612369 ZNF530Q6P9A1 599 aaPredicted RBP24.65■■□□□ 1.54
VCX3A-203ENST00000612369 C5P01031 1676 aa24.65■■□□□ 1.54
VCX3A-203ENST00000612369 DIAPH1O60610 1272 aaKnown RBP24.63■■□□□ 1.53
VCX3A-203ENST00000612369 C1orf141Q5JVX7 400 aa24.63■■□□□ 1.53
VCX3A-203ENST00000612369 TUBGCP6Q96RT7 1819 aa24.63■■□□□ 1.53
VCX3A-203ENST00000612369 FLAD1Q8NFF5 587 aa24.62■■□□□ 1.53
VCX3A-203ENST00000612369 TAF1LQ8IZX4 1826 aa24.62■■□□□ 1.53
VCX3A-203ENST00000612369 LOC102724428A0A0B4J2F2 783 aa24.61■■□□□ 1.53
VCX3A-203ENST00000612369 DCAF8L1A6NGE4 600 aa24.61■■□□□ 1.53
VCX3A-203ENST00000612369 SIK1P57059 783 aa24.61■■□□□ 1.53
VCX3A-203ENST00000612369 ARXQ96QS3 562 aa24.61■■□□□ 1.53
VCX3A-203ENST00000612369 ASAP1Q9ULH1 1129 aa24.6■■□□□ 1.53
VCX3A-203ENST00000612369 POLD1P28340 1107 aa24.59■■□□□ 1.53
VCX3A-203ENST00000612369 ATG3Q9NT62 314 aa24.59■■□□□ 1.53
VCX3A-203ENST00000612369 COL24A1Q17RW2 1714 aa24.58■■□□□ 1.53
VCX3A-203ENST00000612369 CABP4P57796 275 aa24.58■■□□□ 1.53
VCX3A-203ENST00000612369 COL23A1Q86Y22 540 aaPredicted RBP24.58■■□□□ 1.53
VCX3A-203ENST00000612369 KDM6AO15550 1401 aaPredicted RBP24.58■■□□□ 1.53
VCX3A-203ENST00000612369 AK7Q96M32 723 aa24.57■■□□□ 1.52
VCX3A-203ENST00000612369 SYT17Q9BSW7 474 aa24.57■■□□□ 1.52
VCX3A-203ENST00000612369 FHDC1Q9C0D6 1143 aaPredicted RBP24.57■■□□□ 1.52
VCX3A-203ENST00000612369 C4BP0C0L5 1744 aa24.57■■□□□ 1.52
VCX3A-203ENST00000612369 CNGB1Q14028 1251 aaPredicted RBP24.56■■□□□ 1.52
VCX3A-203ENST00000612369 AKAP4Q5JQC9 854 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms