RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 IBSPP21815 317 aaPredicted RBP8.08□□□□□ -1.12
PBX1-221ENST00000612123 TBC1D2BQ9UPU7 963 aa8.08□□□□□ -1.12
PBX1-221ENST00000612123 LRRIQ1Q96JM4 1722 aa8.08□□□□□ -1.12
PBX1-221ENST00000612123 ATP7AQ04656 1500 aa8.08□□□□□ -1.12
PBX1-221ENST00000612123 CPLX1O14810 134 aa8.08□□□□□ -1.12
PBX1-221ENST00000612123 NSD3Q9BZ95 1437 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 EXOSC9Q06265 439 aaKnown RBP8.07□□□□□ -1.12
PBX1-221ENST00000612123 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 TRAPPC8Q9Y2L5 1435 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 ZMYM3Q14202 1370 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 KDM5DQ9BY66 1539 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 TTC21BQ7Z4L5 1316 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 PIP4K2BP78356 416 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 NAA30Q147X3 362 aaPredicted RBP8.07□□□□□ -1.12
PBX1-221ENST00000612123 SRCIN1Q9C0H9 1055 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 GNL3LQ9NVN8 582 aaKnown RBP8.07□□□□□ -1.12
PBX1-221ENST00000612123 AIMP1Q12904 312 aaKnown RBP8.07□□□□□ -1.12
PBX1-221ENST00000612123 UBAP1LF5GYI3 381 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 ST7Q9NRC1 585 aa8.07□□□□□ -1.12
PBX1-221ENST00000612123 MLH3Q9UHC1 1453 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 HSPA2P54652 639 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 RALYLQ86SE5 291 aaKnown RBP8.06□□□□□ -1.12
PBX1-221ENST00000612123 CNTROBQ8N137 903 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 CDC45O75419 566 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 CREBRFQ8IUR6 639 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 CTDP1Q9Y5B0 961 aaPredicted RBP8.06□□□□□ -1.12
PBX1-221ENST00000612123 TTC37Q6PGP7 1564 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 PSMA5P28066 241 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
PBX1-221ENST00000612123 FAM212AQ96EL1 285 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 RBM42Q9BTD8 480 aaKnown RBP8.06□□□□□ -1.12
PBX1-221ENST00000612123 MCM2P49736 904 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 CCDC47Q96A33 483 aaKnown RBP8.06□□□□□ -1.12
PBX1-221ENST00000612123 ANO2Q9NQ90 1003 aa8.06□□□□□ -1.12
PBX1-221ENST00000612123 SURF6O75683 361 aaKnown RBP8.06□□□□□ -1.12
PBX1-221ENST00000612123 GNAT3A8MTJ3 354 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 STARD3NLO95772 234 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 GYS2P54840 703 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 FBXO31Q5XUX0 539 aaPredicted RBP8.05□□□□□ -1.12
PBX1-221ENST00000612123 NEUROD6Q96NK8 337 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 SRRTQ9BXP5 876 aaKnown RBP8.05□□□□□ -1.12
PBX1-221ENST00000612123 ADGRF5Q8IZF2 1346 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 SLC4A2P04920 1241 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 NUCB2P80303 420 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 TTC21AQ8NDW8 1320 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 ATF7IPQ6VMQ6 1270 aa8.05□□□□□ -1.12
PBX1-221ENST00000612123 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.05□□□□□ -1.12
PBX1-221ENST00000612123 V9GYY5 206 aaPredicted RBP8.05□□□□□ -1.12
PBX1-221ENST00000612123 IRX3P78415 501 aaPredicted RBP8.04□□□□□ -1.12
PBX1-221ENST00000612123 SART3Q15020 963 aaKnown RBP8.04□□□□□ -1.12
PBX1-221ENST00000612123 SAFBQ15424 915 aaKnown RBP eCLIP8.04□□□□□ -1.12
PBX1-221ENST00000612123 C8orf34Q49A92 452 aa8.04□□□□□ -1.12
PBX1-221ENST00000612123 RPAP2Q8IXW5 612 aaPredicted RBP8.04□□□□□ -1.12
PBX1-221ENST00000612123 HOOK1Q9UJC3 728 aaKnown RBP8.04□□□□□ -1.12
PBX1-221ENST00000612123 NOS1P29475 1434 aa8.04□□□□□ -1.12
PBX1-221ENST00000612123 ARHGEF40Q8TER5 1519 aa8.04□□□□□ -1.12
PBX1-221ENST00000612123 YEATS2Q9ULM3 1422 aa8.04□□□□□ -1.12
PBX1-221ENST00000612123 RBM27Q9P2N5 1060 aaKnown RBP8.04□□□□□ -1.12
PBX1-221ENST00000612123 CDC42BPAQ5VT25 1732 aa8.04□□□□□ -1.12
PBX1-221ENST00000612123 SLC3A2P08195 630 aaKnown RBP8.04□□□□□ -1.12
PBX1-221ENST00000612123 TMPOP42166 694 aaKnown RBP8.04□□□□□ -1.12
PBX1-221ENST00000612123 WAPLQ7Z5K2 1190 aa8.04□□□□□ -1.12
PBX1-221ENST00000612123 LNPKQ9C0E8 428 aa8.04□□□□□ -1.12
PBX1-221ENST00000612123 CCDC158Q5M9N0 1113 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 LMTK3Q96Q04 1460 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 XBP1P17861 261 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 FAM43BQ6ZT52 329 aaPredicted RBP8.03□□□□□ -1.12
PBX1-221ENST00000612123 DDX54Q8TDD1 881 aaKnown RBP8.03□□□□□ -1.12
PBX1-221ENST00000612123 TEX13AQ9BXU3 409 aaPredicted RBP8.03□□□□□ -1.12
PBX1-221ENST00000612123 ABCC1P33527 1531 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 ZSCAN25Q6NSZ9 544 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.03□□□□□ -1.12
PBX1-221ENST00000612123 IFT57Q9NWB7 429 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 ZNF652Q9Y2D9 606 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 PANK1Q8TE04 598 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 ALDH1L2Q3SY69 923 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 CHMP5Q9NZZ3 219 aa8.03□□□□□ -1.12
PBX1-221ENST00000612123 ANKRD36BQ8N2N9 1353 aa8.02□□□□□ -1.12
PBX1-221ENST00000612123 NCKAP5LQ9HCH0 1330 aa8.02□□□□□ -1.12
PBX1-221ENST00000612123 BTBD11A6QL63 1104 aa8.02□□□□□ -1.12
PBX1-221ENST00000612123 ANKRD65E5RJM6 399 aa8.02□□□□□ -1.12
PBX1-221ENST00000612123 DMTNQ08495 405 aa8.02□□□□□ -1.12
PBX1-221ENST00000612123 WASHC4Q2M389 1173 aa8.02□□□□□ -1.12
PBX1-221ENST00000612123 MSH6P52701 1360 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 HSP90AB3PQ58FF7 597 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 PDCP20941 246 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 TAF7Q15545 349 aaPredicted RBP8.02□□□□□ -1.13
PBX1-221ENST00000612123 KIF13AQ9H1H9 1805 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 EIF2AK4Q9P2K8 1649 aaKnown RBP8.02□□□□□ -1.13
PBX1-221ENST00000612123 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 DHX16O60231 1041 aaKnown RBP8.02□□□□□ -1.13
PBX1-221ENST00000612123 TPM2P07951 284 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 ZC3H6P61129 1189 aaKnown RBP8.02□□□□□ -1.13
PBX1-221ENST00000612123 FSD1Q9BTV5 496 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 PTPRMP28827 1452 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 KDM4FA0A1W2PPD8 638 aa8.02□□□□□ -1.13
PBX1-221ENST00000612123 ARHGEF12Q9NZN5 1544 aa8.01□□□□□ -1.13
PBX1-221ENST00000612123 NUTM2BA6NNL0 878 aaPredicted RBP8.01□□□□□ -1.13
PBX1-221ENST00000612123 NUTM2EB1AL46 878 aaPredicted RBP8.01□□□□□ -1.13
PBX1-221ENST00000612123 NFXL1Q6ZNB6 911 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms