RNA–Protein interactions for RNA: ENST00000611728.1

AC004241.3-201, humanhuman

BASIC

Gene AC004241.3, Length 517 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004241.3-201ENST00000611728 CDCA8Q53HL2 280 aa9.52□□□□□ -0.89
AC004241.3-201ENST00000611728 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
AC004241.3-201ENST00000611728 ATG7O95352 703 aa9.51□□□□□ -0.89
AC004241.3-201ENST00000611728 SCTRP47872 440 aa9.51□□□□□ -0.89
AC004241.3-201ENST00000611728 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
AC004241.3-201ENST00000611728 DNAAF2Q9NVR5 837 aaKnown RBP9.51□□□□□ -0.89
AC004241.3-201ENST00000611728 RBM19Q9Y4C8 960 aaKnown RBP9.51□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L15C9J2P7 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L13C9JLJ4 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L12C9JPN9 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L11C9JVI0 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L21D6R901 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L18D6R9N7 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L22D6RA61 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L17D6RBQ6 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L19D6RCP7 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L20D6RJB6 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 CSB-PGBD3P0DP91 1061 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 WDR4P57081 412 aaKnown RBP9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 USP17L24Q0WX57 530 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 CYP2U1Q7Z449 544 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 OGFOD1Q8N543 542 aa9.5□□□□□ -0.89
AC004241.3-201ENST00000611728 ZIC2O95409 532 aaPredicted RBP9.49□□□□□ -0.89
AC004241.3-201ENST00000611728 LARGE2Q8N3Y3 721 aa9.49□□□□□ -0.89
AC004241.3-201ENST00000611728 ZNF594Q96JF6 807 aaPredicted RBP9.49□□□□□ -0.89
AC004241.3-201ENST00000611728 CLDN10P78369 228 aa9.48□□□□□ -0.89
AC004241.3-201ENST00000611728 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
AC004241.3-201ENST00000611728 ITPKCQ96DU7 683 aa9.48□□□□□ -0.89
AC004241.3-201ENST00000611728 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
AC004241.3-201ENST00000611728 LILRA1O75019 489 aa9.47□□□□□ -0.89
AC004241.3-201ENST00000611728 PDE4CQ08493 712 aa9.47□□□□□ -0.89
AC004241.3-201ENST00000611728 ELOAQ14241 798 aaKnown RBP9.47□□□□□ -0.89
AC004241.3-201ENST00000611728 OSBPL3Q9H4L5 887 aa9.47□□□□□ -0.89
AC004241.3-201ENST00000611728 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
AC004241.3-201ENST00000611728 TIMP2P16035 220 aa9.46□□□□□ -0.9
AC004241.3-201ENST00000611728 PTK7Q13308 1070 aa9.46□□□□□ -0.9
AC004241.3-201ENST00000611728 SIX5Q8N196 739 aa9.46□□□□□ -0.9
AC004241.3-201ENST00000611728 RETREG2Q8NC44 543 aa9.46□□□□□ -0.9
AC004241.3-201ENST00000611728 TPCN2Q8NHX9 752 aa9.46□□□□□ -0.9
AC004241.3-201ENST00000611728 HPS1Q92902 700 aa9.46□□□□□ -0.9
AC004241.3-201ENST00000611728 USTQ9Y2C2 406 aa9.46□□□□□ -0.9
AC004241.3-201ENST00000611728 ADH1AP07327 375 aa9.45□□□□□ -0.9
AC004241.3-201ENST00000611728 ANKMY2Q8IV38 441 aa9.45□□□□□ -0.9
AC004241.3-201ENST00000611728 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
AC004241.3-201ENST00000611728 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
AC004241.3-201ENST00000611728 PCDHGA11Q9Y5H2 935 aa9.45□□□□□ -0.9
AC004241.3-201ENST00000611728 NRG2O14511 850 aaPredicted RBP9.44□□□□□ -0.9
AC004241.3-201ENST00000611728 GFRA3O60609 400 aa9.44□□□□□ -0.9
AC004241.3-201ENST00000611728 LAPTM4AQ15012 233 aa9.44□□□□□ -0.9
AC004241.3-201ENST00000611728 CCDC102BQ68D86 513 aa9.44□□□□□ -0.9
AC004241.3-201ENST00000611728 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
AC004241.3-201ENST00000611728 KIAA1024Q9UPX6 916 aa9.44□□□□□ -0.9
AC004241.3-201ENST00000611728 GNRH1P01148 92 aa9.43□□□□□ -0.9
AC004241.3-201ENST00000611728 DPYDQ12882 1025 aa9.43□□□□□ -0.9
AC004241.3-201ENST00000611728 CBLBQ13191 982 aa9.43□□□□□ -0.9
AC004241.3-201ENST00000611728 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
AC004241.3-201ENST00000611728 ESCO1Q5FWF5 840 aa9.43□□□□□ -0.9
AC004241.3-201ENST00000611728 Q6ZVU0 165 aa9.43□□□□□ -0.9
AC004241.3-201ENST00000611728 CAPN5O15484 640 aaPredicted RBP9.42□□□□□ -0.9
AC004241.3-201ENST00000611728 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
AC004241.3-201ENST00000611728 SEC13P55735 322 aa9.42□□□□□ -0.9
AC004241.3-201ENST00000611728 STK32AQ8WU08 396 aa9.42□□□□□ -0.9
AC004241.3-201ENST00000611728 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
AC004241.3-201ENST00000611728 ZMIZ1Q9ULJ6 1067 aa9.42□□□□□ -0.9
AC004241.3-201ENST00000611728 DGAT1O75907 488 aa9.41□□□□□ -0.9
AC004241.3-201ENST00000611728 UPP2O95045 317 aa9.41□□□□□ -0.9
AC004241.3-201ENST00000611728 MEIOBQ8N635 442 aa9.41□□□□□ -0.9
AC004241.3-201ENST00000611728 ARHGEF10LQ9HCE6 1279 aa9.41□□□□□ -0.9
AC004241.3-201ENST00000611728 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
AC004241.3-201ENST00000611728 AVPP01185 164 aa9.4□□□□□ -0.9
AC004241.3-201ENST00000611728 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.9
AC004241.3-201ENST00000611728 GDF10P55107 478 aa9.4□□□□□ -0.9
AC004241.3-201ENST00000611728 TMEM164Q5U3C3 297 aa9.4□□□□□ -0.9
AC004241.3-201ENST00000611728 WASLO00401 505 aaPredicted RBP9.39□□□□□ -0.91
AC004241.3-201ENST00000611728 BACH1O14867 736 aa9.39□□□□□ -0.91
AC004241.3-201ENST00000611728 RELBQ01201 579 aa9.39□□□□□ -0.91
AC004241.3-201ENST00000611728 CTC1Q2NKJ3 1217 aa9.39□□□□□ -0.91
AC004241.3-201ENST00000611728 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
AC004241.3-201ENST00000611728 SFI1A8K8P3 1242 aa9.38□□□□□ -0.91
AC004241.3-201ENST00000611728 INHAP05111 366 aa9.38□□□□□ -0.91
AC004241.3-201ENST00000611728 PTGIRP43119 386 aa9.38□□□□□ -0.91
AC004241.3-201ENST00000611728 SCNN1DP51172 638 aa9.38□□□□□ -0.91
AC004241.3-201ENST00000611728 AGBL1Q96MI9 1066 aa9.38□□□□□ -0.91
AC004241.3-201ENST00000611728 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
AC004241.3-201ENST00000611728 RAB6BQ9NRW1 208 aa9.38□□□□□ -0.91
AC004241.3-201ENST00000611728 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
AC004241.3-201ENST00000611728 M0R2N6 131 aa9.37□□□□□ -0.91
AC004241.3-201ENST00000611728 DKK1O94907 266 aa9.37□□□□□ -0.91
AC004241.3-201ENST00000611728 SWI5Q1ZZU3 235 aa9.37□□□□□ -0.91
AC004241.3-201ENST00000611728 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
AC004241.3-201ENST00000611728 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
AC004241.3-201ENST00000611728 NLRP3Q96P20 1036 aa9.37□□□□□ -0.91
AC004241.3-201ENST00000611728 TMEM229AB2RXF0 380 aa9.36□□□□□ -0.91
AC004241.3-201ENST00000611728 MEN1O00255 615 aa9.36□□□□□ -0.91
AC004241.3-201ENST00000611728 CLN3Q13286 438 aa9.36□□□□□ -0.91
AC004241.3-201ENST00000611728 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
AC004241.3-201ENST00000611728 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
AC004241.3-201ENST00000611728 TMEM88BA6NKF7 163 aa9.35□□□□□ -0.91
AC004241.3-201ENST00000611728 AXIN1O15169 862 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms