RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 EMILIN1Q9Y6C2 1016 aa14.57□□□□□ -0.08
TPM3-223ENST00000611659 ARHGAP31Q2M1Z3 1444 aa14.57□□□□□ -0.08
TPM3-223ENST00000611659 PPLO60437 1756 aa14.57□□□□□ -0.08
TPM3-223ENST00000611659 KIAA2012Q0VF49 1180 aa14.57□□□□□ -0.08
TPM3-223ENST00000611659 TMX3Q96JJ7 454 aa14.57□□□□□ -0.08
TPM3-223ENST00000611659 TSPY26PQ9H489 355 aa14.57□□□□□ -0.08
TPM3-223ENST00000611659 PRDM4Q9UKN5 801 aa14.57□□□□□ -0.08
TPM3-223ENST00000611659 FAM135BQ49AJ0 1406 aa14.56□□□□□ -0.08
TPM3-223ENST00000611659 PNPLA6Q8IY17 1366 aa14.56□□□□□ -0.08
TPM3-223ENST00000611659 ANKRD44Q8N8A2 993 aa14.56□□□□□ -0.08
TPM3-223ENST00000611659 JARID2Q92833 1246 aaPredicted RBP14.56□□□□□ -0.08
TPM3-223ENST00000611659 KRT24Q2M2I5 525 aa14.56□□□□□ -0.08
TPM3-223ENST00000611659 ZNF830Q96NB3 372 aaPredicted RBP14.56□□□□□ -0.08
TPM3-223ENST00000611659 CDK19Q9BWU1 502 aa14.56□□□□□ -0.08
TPM3-223ENST00000611659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
TPM3-223ENST00000611659 IDI1Q13907 227 aa14.55□□□□□ -0.08
TPM3-223ENST00000611659 TSHZ3Q63HK5 1081 aa14.55□□□□□ -0.08
TPM3-223ENST00000611659 CEP85Q6P2H3 762 aa14.55□□□□□ -0.08
TPM3-223ENST00000611659 MTERF4Q7Z6M4 381 aaKnown RBP14.55□□□□□ -0.08
TPM3-223ENST00000611659 TSC1Q92574 1164 aa14.55□□□□□ -0.08
TPM3-223ENST00000611659 ARAP3Q8WWN8 1544 aa14.55□□□□□ -0.08
TPM3-223ENST00000611659 ARHGEF28Q8N1W1 1705 aaKnown RBP14.54□□□□□ -0.08
TPM3-223ENST00000611659 ZNF853P0CG23 659 aa14.54□□□□□ -0.08
TPM3-223ENST00000611659 MEIS3Q99687 375 aa14.54□□□□□ -0.08
TPM3-223ENST00000611659 CAMSAP1Q5T5Y3 1602 aa14.53□□□□□ -0.08
TPM3-223ENST00000611659 RPAP2Q8IXW5 612 aaPredicted RBP14.53□□□□□ -0.08
TPM3-223ENST00000611659 SYAP1Q96A49 352 aaPredicted RBP14.53□□□□□ -0.08
TPM3-223ENST00000611659 PLCB2Q00722 1185 aa14.52□□□□□ -0.08
TPM3-223ENST00000611659 ZHX1Q9UKY1 873 aaPredicted RBP14.52□□□□□ -0.08
TPM3-223ENST00000611659 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.09
TPM3-223ENST00000611659 ZFYVE9O95405 1425 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 LMTK2Q8IWU2 1503 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 CD163L1Q9NR16 1453 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 FAM177BA6PVY3 158 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 GADD45BO75293 160 aaPredicted RBP14.51□□□□□ -0.09
TPM3-223ENST00000611659 SLC4A10Q6U841 1118 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 C17orf53Q8N3J3 647 aaPredicted RBP14.51□□□□□ -0.09
TPM3-223ENST00000611659 USP25Q9UHP3 1055 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 REREQ9P2R6 1566 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 BRD1O95696 1058 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 ANO2Q9NQ90 1003 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 MSH6P52701 1360 aa14.51□□□□□ -0.09
TPM3-223ENST00000611659 FBXO31Q5XUX0 539 aaPredicted RBP14.5□□□□□ -0.09
TPM3-223ENST00000611659 UPF3BQ9BZI7 483 aaKnown RBP14.5□□□□□ -0.09
TPM3-223ENST00000611659 RRS1Q15050 365 aaKnown RBP14.5□□□□□ -0.09
TPM3-223ENST00000611659 SMAP1Q8IYB5 467 aaPredicted RBP14.5□□□□□ -0.09
TPM3-223ENST00000611659 RILPL2Q969X0 211 aa14.5□□□□□ -0.09
TPM3-223ENST00000611659 TTC12Q9H892 705 aaPredicted RBP14.5□□□□□ -0.09
TPM3-223ENST00000611659 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
TPM3-223ENST00000611659 TRIM6-TRIM34B2RNG4 842 aa14.5□□□□□ -0.09
TPM3-223ENST00000611659 IL13P35225 146 aa14.5□□□□□ -0.09
TPM3-223ENST00000611659 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
TPM3-223ENST00000611659 PALD1Q9ULE6 856 aa14.5□□□□□ -0.09
TPM3-223ENST00000611659 ABCA9Q8IUA7 1624 aa14.5□□□□□ -0.09
TPM3-223ENST00000611659 ATP10DQ9P241 1426 aa14.49□□□□□ -0.09
TPM3-223ENST00000611659 MCCP23508 829 aa14.49□□□□□ -0.09
TPM3-223ENST00000611659 PDE1AP54750 535 aa14.49□□□□□ -0.09
TPM3-223ENST00000611659 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.49□□□□□ -0.09
TPM3-223ENST00000611659 KNDC1Q76NI1 1749 aa14.49□□□□□ -0.09
TPM3-223ENST00000611659 PHF14O94880 888 aa14.49□□□□□ -0.09
TPM3-223ENST00000611659 EXOC6BQ9Y2D4 811 aa14.49□□□□□ -0.09
TPM3-223ENST00000611659 KIDINS220Q9ULH0 1771 aa14.49□□□□□ -0.09
TPM3-223ENST00000611659 YTHDC2Q9H6S0 1430 aaKnown RBP14.49□□□□□ -0.09
TPM3-223ENST00000611659 NME9Q86XW9 330 aa14.48□□□□□ -0.09
TPM3-223ENST00000611659 MYRIPQ8NFW9 859 aa14.48□□□□□ -0.09
TPM3-223ENST00000611659 CCDC94Q9BW85 323 aaPredicted RBP14.48□□□□□ -0.09
TPM3-223ENST00000611659 RTL1A6NKG5 1358 aa14.48□□□□□ -0.09
TPM3-223ENST00000611659 RIMS2Q9UQ26 1411 aa14.48□□□□□ -0.09
TPM3-223ENST00000611659 HMMRO75330 724 aa14.48□□□□□ -0.09
TPM3-223ENST00000611659 USP48Q86UV5 1035 aa14.48□□□□□ -0.09
TPM3-223ENST00000611659 MCM2P49736 904 aa14.47□□□□□ -0.09
TPM3-223ENST00000611659 NOLC1Q14978 699 aaKnown RBP eCLIP14.47□□□□□ -0.09
TPM3-223ENST00000611659 CBX1P83916 185 aa14.47□□□□□ -0.09
TPM3-223ENST00000611659 MCM10Q7L590 875 aa14.47□□□□□ -0.09
TPM3-223ENST00000611659 F6X3S4 739 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 ADCY5O95622 1261 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 MLECQ14165 292 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 WAPLQ7Z5K2 1190 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 ABCC3O15438 1527 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 NEXMIFQ5QGS0 1516 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 HCLS1P14317 486 aaPredicted RBP14.46□□□□□ -0.09
TPM3-223ENST00000611659 ESYT1Q9BSJ8 1104 aa14.46□□□□□ -0.09
TPM3-223ENST00000611659 PIBF1Q8WXW3 757 aa14.45□□□□□ -0.1
TPM3-223ENST00000611659 MIS18AQ9NYP9 233 aa14.45□□□□□ -0.1
TPM3-223ENST00000611659 CUL4AQ13619 759 aa14.44□□□□□ -0.1
TPM3-223ENST00000611659 AEBP1Q8IUX7 1158 aa14.44□□□□□ -0.1
TPM3-223ENST00000611659 PTPRMP28827 1452 aa14.44□□□□□ -0.1
TPM3-223ENST00000611659 HMGN5P82970 282 aaKnown RBP14.44□□□□□ -0.1
TPM3-223ENST00000611659 PRIMPOLQ96LW4 560 aa14.44□□□□□ -0.1
TPM3-223ENST00000611659 LARP6Q9BRS8 491 aaKnown RBP14.44□□□□□ -0.1
TPM3-223ENST00000611659 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
TPM3-223ENST00000611659 HAP1P54257 671 aaPredicted RBP14.43□□□□□ -0.1
TPM3-223ENST00000611659 ZNF710Q8N1W2 664 aa14.43□□□□□ -0.1
TPM3-223ENST00000611659 FAM184AQ8NB25 1140 aa14.43□□□□□ -0.1
TPM3-223ENST00000611659 CNPY2Q9Y2B0 182 aa14.43□□□□□ -0.1
TPM3-223ENST00000611659 PPP4R3BQ5MIZ7 849 aa14.43□□□□□ -0.1
TPM3-223ENST00000611659 SULT6B1Q6IMI4 303 aa14.43□□□□□ -0.1
TPM3-223ENST00000611659 INTS4Q96HW7 963 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms