RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 TCEANC2Q96MN5 208 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 BRPF1P55201 1214 aaPredicted RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 RALYLQ86SE5 291 aaKnown RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 CKAP2LQ8IYA6 745 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 PHACTR3Q96KR7 559 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 PCMTD1Q96MG8 357 aaPredicted RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 TNMDQ9H2S6 317 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 USP25Q9UHP3 1055 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 TAF7Q15545 349 aaPredicted RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 CWC22Q9HCG8 908 aaKnown RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 FAM135AQ9P2D6 1515 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 FOXO3O43524 673 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 MARCH6O60337 910 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 BAG4O95429 457 aaKnown RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 PSMA5P28066 241 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 ME1P48163 572 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 NUCB1Q02818 461 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 HSP90AB2PQ58FF8 381 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 SAMD1Q6SPF0 538 aaPredicted RBP4.54□□□□□ -1.68
RNF38-210ENST00000611646 FILIP1Q7Z7B0 1213 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 RAB11FIP4Q86YS3 637 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 ZBTB9Q96C00 473 aa4.54□□□□□ -1.68
RNF38-210ENST00000611646 ATP10BO94823 1461 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 PZPP20742 1482 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 SYCP2Q9BX26 1530 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 A0A0U1RQG5 324 aaPredicted RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 TPM3P06753 285 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 PIP4K2AP48426 406 aaPredicted RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 VPS37DQ86XT2 251 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 RPAP2Q8IXW5 612 aaPredicted RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 ZGPATQ8N5A5 531 aaKnown RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 OTUD7AQ8TE49 926 aaPredicted RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 PIBF1Q8WXW3 757 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 SLC52A1Q9NWF4 448 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 CCDC61Q9Y6R9 512 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 WDR33Q9C0J8 1336 aaKnown RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 ADGRL1O94910 1474 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 GNAT3A8MTJ3 354 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 SDSP20132 328 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 SPATA32Q96LK8 384 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 C14orf93Q9H972 538 aaKnown RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 TFIP11Q9UBB9 837 aaKnown RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 KDM6BO15054 1643 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 DHX16O60231 1041 aaKnown RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 ALDH1L2Q3SY69 923 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 ZSCAN30Q86W11 494 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 PKNOX2Q96KN3 472 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 KINO60870 393 aaKnown RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 TPM2P07951 284 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 ZSCAN23Q3MJ62 389 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 PLEKHO1Q53GL0 409 aaPredicted RBP4.53□□□□□ -1.68
RNF38-210ENST00000611646 TMX1Q9H3N1 280 aa4.53□□□□□ -1.68
RNF38-210ENST00000611646 CFAP43Q8NDM7 1665 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 CCDC192P0DO97 292 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 CBX1P83916 185 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 TTC22Q5TAA0 569 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 NECAB1Q8N987 351 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 ZNF692Q9BU19 519 aaPredicted RBP4.52□□□□□ -1.69
RNF38-210ENST00000611646 CIZ1Q9ULV3 898 aaPredicted RBP4.52□□□□□ -1.69
RNF38-210ENST00000611646 MAGI3Q5TCQ9 1506 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 ASXL1Q8IXJ9 1541 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 PTCD1O75127 700 aaKnown RBP4.52□□□□□ -1.69
RNF38-210ENST00000611646 MCM2P49736 904 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 FLIIQ13045 1269 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 BMP2KLQ5H9B9 411 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 CPLX2Q6PUV4 134 aaKnown RBP4.52□□□□□ -1.69
RNF38-210ENST00000611646 BLOC1S2Q6QNY1 142 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 RAPGEF6Q8TEU7 1601 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 LAMC3Q9Y6N6 1575 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 TRAPPC8Q9Y2L5 1435 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 KDM2BQ8NHM5 1336 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 STK38Q15208 465 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 GOLGA6L1Q8N7Z2 621 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 MNS1Q8NEH6 495 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 TEX14Q8IWB6 1497 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 WASLO00401 505 aaPredicted RBP4.52□□□□□ -1.69
RNF38-210ENST00000611646 KRT85P78386 507 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 TTC39AQ5SRH9 613 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 ISM2Q6H9L7 571 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 CCDC82Q8N4S0 544 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 CCDC34Q96HJ3 373 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 CHAMP1Q96JM3 812 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 LRRC2Q9BYS8 371 aa4.52□□□□□ -1.69
RNF38-210ENST00000611646 RRAGDQ9NQL2 400 aaPredicted RBP4.52□□□□□ -1.69
RNF38-210ENST00000611646 RPGRIP1LQ68CZ1 1315 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 G3V3G9 751 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 CPA1P15085 419 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 ATF3P18847 181 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 CCT2P78371 535 aaKnown RBP4.51□□□□□ -1.69
RNF38-210ENST00000611646 DCAF8Q5TAQ9 597 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 GIMAP6Q6P9H5 292 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 MRPL50Q8N5N7 158 aaKnown RBP4.51□□□□□ -1.69
RNF38-210ENST00000611646 MYD88Q99836 296 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 NUP62CLQ9H1M0 184 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 SRCAPQ6ZRS2 3230 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 ERICH2A1L162 156 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 CABP4P57796 275 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 TMX3Q96JJ7 454 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 CNPY2Q9Y2B0 182 aa4.51□□□□□ -1.69
RNF38-210ENST00000611646 TCOF1Q13428 1488 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms