RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TAF4BQ92750 862 aa15.33■□□□□ 0.05
USP6NL-205ENST00000609104 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.05
USP6NL-205ENST00000609104 ARHGAP29Q52LW3 1261 aa15.33■□□□□ 0.04
USP6NL-205ENST00000609104 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.04
USP6NL-205ENST00000609104 ZNF76P36508 570 aa15.33■□□□□ 0.04
USP6NL-205ENST00000609104 PTPN14Q15678 1187 aa15.33■□□□□ 0.04
USP6NL-205ENST00000609104 PPP1R1BQ9UD71 204 aaPredicted RBP15.33■□□□□ 0.04
USP6NL-205ENST00000609104 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.04
USP6NL-205ENST00000609104 IBSPP21815 317 aaPredicted RBP15.32■□□□□ 0.04
USP6NL-205ENST00000609104 UBAC1Q9BSL1 405 aa15.32■□□□□ 0.04
USP6NL-205ENST00000609104 USP5P45974 858 aa15.32■□□□□ 0.04
USP6NL-205ENST00000609104 GPRASP1Q5JY77 1395 aa15.32■□□□□ 0.04
USP6NL-205ENST00000609104 SRGAP3O43295 1099 aa15.32■□□□□ 0.04
USP6NL-205ENST00000609104 IL1RAPL2Q9NP60 686 aa15.32■□□□□ 0.04
USP6NL-205ENST00000609104 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
USP6NL-205ENST00000609104 TATP17735 454 aaPredicted RBP15.31■□□□□ 0.04
USP6NL-205ENST00000609104 DDX54Q8TDD1 881 aaKnown RBP15.31■□□□□ 0.04
USP6NL-205ENST00000609104 CCDC91Q7Z6B0 441 aa15.31■□□□□ 0.04
USP6NL-205ENST00000609104 ZSCAN29Q8IWY8 852 aaPredicted RBP15.31■□□□□ 0.04
USP6NL-205ENST00000609104 NEBLO76041 1014 aa15.31■□□□□ 0.04
USP6NL-205ENST00000609104 SLC26A8Q96RN1 970 aa15.31■□□□□ 0.04
USP6NL-205ENST00000609104 FYCO1Q9BQS8 1478 aa15.31■□□□□ 0.04
USP6NL-205ENST00000609104 FGD6Q6ZV73 1430 aa15.31■□□□□ 0.04
USP6NL-205ENST00000609104 TMX1Q9H3N1 280 aa15.31■□□□□ 0.04
USP6NL-205ENST00000609104 GOPCQ9HD26 462 aa15.31■□□□□ 0.04
USP6NL-205ENST00000609104 CCDC97Q96F63 343 aaPredicted RBP15.31■□□□□ 0.04
USP6NL-205ENST00000609104 CFAP70Q5T0N1 1121 aa15.3■□□□□ 0.04
USP6NL-205ENST00000609104 GIMAP7Q8NHV1 300 aa15.3■□□□□ 0.04
USP6NL-205ENST00000609104 PRAM1Q96QH2 718 aa15.3■□□□□ 0.04
USP6NL-205ENST00000609104 PODXL2Q9NZ53 605 aa15.3■□□□□ 0.04
USP6NL-205ENST00000609104 DESP17661 470 aa15.3■□□□□ 0.04
USP6NL-205ENST00000609104 ZSCAN31Q96LW9 406 aaPredicted RBP15.3■□□□□ 0.04
USP6NL-205ENST00000609104 CEP131Q9UPN4 1083 aa15.3■□□□□ 0.04
USP6NL-205ENST00000609104 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
USP6NL-205ENST00000609104 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
USP6NL-205ENST00000609104 RAI14Q9P0K7 980 aa15.29■□□□□ 0.04
USP6NL-205ENST00000609104 SHTN1A0MZ66 631 aa15.29■□□□□ 0.04
USP6NL-205ENST00000609104 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
USP6NL-205ENST00000609104 POLR3GO15318 223 aaPredicted RBP15.29■□□□□ 0.04
USP6NL-205ENST00000609104 CTNNA3Q9UI47 895 aa15.29■□□□□ 0.04
USP6NL-205ENST00000609104 CCDC83Q8IWF9 413 aa15.29■□□□□ 0.04
USP6NL-205ENST00000609104 CDK19Q9BWU1 502 aa15.29■□□□□ 0.04
USP6NL-205ENST00000609104 SLC12A5Q9H2X9 1139 aa15.29■□□□□ 0.04
USP6NL-205ENST00000609104 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
USP6NL-205ENST00000609104 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 URI1O94763 535 aaPredicted RBP15.28■□□□□ 0.04
USP6NL-205ENST00000609104 KRT32Q14532 448 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 SPA17Q15506 151 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 LRP2BPQ9P2M1 347 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 KIF5CO60282 957 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 CCDC178Q5BJE1 867 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 KIF18AQ8NI77 898 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 NF2P35240 595 aa15.28■□□□□ 0.04
USP6NL-205ENST00000609104 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
USP6NL-205ENST00000609104 ZSCAN30Q86W11 494 aa15.27■□□□□ 0.04
USP6NL-205ENST00000609104 NUTM1Q86Y26 1132 aa15.27■□□□□ 0.04
USP6NL-205ENST00000609104 GBP3Q9H0R5 595 aa15.27■□□□□ 0.04
USP6NL-205ENST00000609104 MAP9Q49MG5 647 aa15.27■□□□□ 0.03
USP6NL-205ENST00000609104 WASF1Q92558 559 aa15.27■□□□□ 0.03
USP6NL-205ENST00000609104 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.03
USP6NL-205ENST00000609104 IMMTQ16891 758 aaKnown RBP15.27■□□□□ 0.03
USP6NL-205ENST00000609104 ANAPC15P60006 121 aa15.26■□□□□ 0.03
USP6NL-205ENST00000609104 GUCY1B3Q02153 619 aa15.26■□□□□ 0.03
USP6NL-205ENST00000609104 CCDC183Q5T5S1 534 aa15.26■□□□□ 0.03
USP6NL-205ENST00000609104 KIF4BQ2VIQ3 1234 aa15.26■□□□□ 0.03
USP6NL-205ENST00000609104 CCDC85AQ96PX6 553 aaPredicted RBP15.26■□□□□ 0.03
USP6NL-205ENST00000609104 DNA2P51530 1060 aa15.26■□□□□ 0.03
USP6NL-205ENST00000609104 TRMT1Q9NXH9 659 aaKnown RBP15.26■□□□□ 0.03
USP6NL-205ENST00000609104 CADPSQ9ULU8 1353 aa15.26■□□□□ 0.03
USP6NL-205ENST00000609104 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
USP6NL-205ENST00000609104 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
USP6NL-205ENST00000609104 CACNA2D4Q7Z3S7 1137 aa15.26■□□□□ 0.03
USP6NL-205ENST00000609104 SFPQP23246 707 aaKnown RBP eCLIP15.26■□□□□ 0.03
USP6NL-205ENST00000609104 IFFO1Q0D2I5 559 aa15.25■□□□□ 0.03
USP6NL-205ENST00000609104 ZSCAN12O43309 604 aa15.25■□□□□ 0.03
USP6NL-205ENST00000609104 LRRC9Q6ZRR7 1453 aa15.25■□□□□ 0.03
USP6NL-205ENST00000609104 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
USP6NL-205ENST00000609104 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
USP6NL-205ENST00000609104 FERMT3Q86UX7 667 aa15.25■□□□□ 0.03
USP6NL-205ENST00000609104 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.25■□□□□ 0.03
USP6NL-205ENST00000609104 RNF187Q5TA31 235 aaPredicted RBP15.25■□□□□ 0.03
USP6NL-205ENST00000609104 TOM1L2Q6ZVM7 507 aa15.25■□□□□ 0.03
USP6NL-205ENST00000609104 FAM69CQ0P6D2 419 aa15.24■□□□□ 0.03
USP6NL-205ENST00000609104 TXNDC2Q86VQ3 553 aa15.24■□□□□ 0.03
USP6NL-205ENST00000609104 TMEM57Q8N5G2 664 aa15.24■□□□□ 0.03
USP6NL-205ENST00000609104 TRERF1Q96PN7 1200 aa15.24■□□□□ 0.03
USP6NL-205ENST00000609104 CEP126Q9P2H0 1117 aa15.24■□□□□ 0.03
USP6NL-205ENST00000609104 TOP1P11387 765 aaKnown RBP15.24■□□□□ 0.03
USP6NL-205ENST00000609104 PNISRQ8TF01 805 aaKnown RBP15.24■□□□□ 0.03
USP6NL-205ENST00000609104 ANO10Q9NW15 660 aa15.24■□□□□ 0.03
USP6NL-205ENST00000609104 SMARCA5O60264 1052 aaPredicted RBP15.24■□□□□ 0.03
USP6NL-205ENST00000609104 ZNF530Q6P9A1 599 aaPredicted RBP15.24■□□□□ 0.03
USP6NL-205ENST00000609104 CABP1Q9NZU7 370 aa15.24■□□□□ 0.03
USP6NL-205ENST00000609104 EXOC6BQ9Y2D4 811 aa15.24■□□□□ 0.03
USP6NL-205ENST00000609104 FKBP15Q5T1M5 1219 aa15.23■□□□□ 0.03
USP6NL-205ENST00000609104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.23■□□□□ 0.03
USP6NL-205ENST00000609104 ABCF2Q9UG63 623 aa15.23■□□□□ 0.03
USP6NL-205ENST00000609104 MCM3P25205 808 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms