RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 APBA3O96018 575 aa19.31■□□□□ 0.68
HDDC2-206ENST00000608461 DEFB132Q7Z7B7 95 aa19.31■□□□□ 0.68
HDDC2-206ENST00000608461 PCDH11XQ9BZA7 1347 aa19.3■□□□□ 0.68
HDDC2-206ENST00000608461 PCDH11YQ9BZA8 1340 aa19.3■□□□□ 0.68
HDDC2-206ENST00000608461 PLSCR1O15162 318 aa19.3■□□□□ 0.68
HDDC2-206ENST00000608461 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
HDDC2-206ENST00000608461 IL13P35225 146 aa19.29■□□□□ 0.68
HDDC2-206ENST00000608461 SPG7Q9UQ90 795 aa19.29■□□□□ 0.68
HDDC2-206ENST00000608461 RGPD3A6NKT7 1758 aaPredicted RBP19.29■□□□□ 0.68
HDDC2-206ENST00000608461 RGPD4Q7Z3J3 1758 aa19.29■□□□□ 0.68
HDDC2-206ENST00000608461 PKD1L3Q7Z443 1732 aa19.28■□□□□ 0.68
HDDC2-206ENST00000608461 SHANK3Q9BYB0 1731 aa19.28■□□□□ 0.68
HDDC2-206ENST00000608461 CAMKK2Q96RR4 588 aa19.28■□□□□ 0.68
HDDC2-206ENST00000608461 NHSQ6T4R5 1651 aa19.27■□□□□ 0.68
HDDC2-206ENST00000608461 EN1Q05925 392 aaPredicted RBP19.27■□□□□ 0.68
HDDC2-206ENST00000608461 DIAPH1O60610 1272 aaKnown RBP19.26■□□□□ 0.67
HDDC2-206ENST00000608461 KDRP35968 1356 aa19.26■□□□□ 0.67
HDDC2-206ENST00000608461 CFAP53Q96M91 514 aa19.25■□□□□ 0.67
HDDC2-206ENST00000608461 DDX10Q13206 875 aaKnown RBP19.24■□□□□ 0.67
HDDC2-206ENST00000608461 AMOTQ4VCS5 1084 aa19.24■□□□□ 0.67
HDDC2-206ENST00000608461 PPP2R1AP30153 589 aa19.23■□□□□ 0.67
HDDC2-206ENST00000608461 NKX1-1Q15270 411 aaPredicted RBP19.23■□□□□ 0.67
HDDC2-206ENST00000608461 EZH2Q15910 746 aaKnown RBP19.23■□□□□ 0.67
HDDC2-206ENST00000608461 CYP27B1O15528 508 aa19.22■□□□□ 0.67
HDDC2-206ENST00000608461 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
HDDC2-206ENST00000608461 RALBP1Q15311 655 aa19.22■□□□□ 0.67
HDDC2-206ENST00000608461 PLEKHO1Q53GL0 409 aaPredicted RBP19.22■□□□□ 0.67
HDDC2-206ENST00000608461 SULT6B1Q6IMI4 303 aa19.22■□□□□ 0.67
HDDC2-206ENST00000608461 KCNQ2O43526 872 aa19.21■□□□□ 0.67
HDDC2-206ENST00000608461 IFNL2Q8IZJ0 200 aa19.21■□□□□ 0.67
HDDC2-206ENST00000608461 ACSBG1Q96GR2 724 aa19.21■□□□□ 0.67
HDDC2-206ENST00000608461 COL3A1P02461 1466 aaPredicted RBP19.21■□□□□ 0.67
HDDC2-206ENST00000608461 RREB1Q92766 1687 aa19.2■□□□□ 0.66
HDDC2-206ENST00000608461 KAT6BQ8WYB5 2073 aa19.2■□□□□ 0.66
HDDC2-206ENST00000608461 HSP90AB1P08238 724 aaKnown RBP19.19■□□□□ 0.66
HDDC2-206ENST00000608461 PTF1AQ7RTS3 328 aa19.19■□□□□ 0.66
HDDC2-206ENST00000608461 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
HDDC2-206ENST00000608461 DOT1LQ8TEK3 1739 aa19.19■□□□□ 0.66
HDDC2-206ENST00000608461 BTAF1O14981 1849 aa19.18■□□□□ 0.66
HDDC2-206ENST00000608461 PHKG2P15735 406 aa19.18■□□□□ 0.66
HDDC2-206ENST00000608461 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
HDDC2-206ENST00000608461 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
HDDC2-206ENST00000608461 NBPF14Q5TI25 921 aa19.17■□□□□ 0.66
HDDC2-206ENST00000608461 AEBP1Q8IUX7 1158 aa19.17■□□□□ 0.66
HDDC2-206ENST00000608461 ZNF316A6NFI3 1004 aaPredicted RBP19.16■□□□□ 0.66
HDDC2-206ENST00000608461 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
HDDC2-206ENST00000608461 NUP188Q5SRE5 1749 aa19.15■□□□□ 0.66
HDDC2-206ENST00000608461 TXNRD1Q16881 649 aa19.14■□□□□ 0.65
HDDC2-206ENST00000608461 PROM2Q8N271 834 aa19.14■□□□□ 0.65
HDDC2-206ENST00000608461 DCAF5Q96JK2 942 aa19.14■□□□□ 0.65
HDDC2-206ENST00000608461 U2SURPO15042 1029 aaKnown RBP19.13■□□□□ 0.65
HDDC2-206ENST00000608461 C1orf141Q5JVX7 400 aa19.13■□□□□ 0.65
HDDC2-206ENST00000608461 SLC27A3Q5K4L6 730 aa19.13■□□□□ 0.65
HDDC2-206ENST00000608461 ZNF530Q6P9A1 599 aaPredicted RBP19.13■□□□□ 0.65
HDDC2-206ENST00000608461 ERVV-2B6SEH9 535 aa19.12■□□□□ 0.65
HDDC2-206ENST00000608461 HMOX1P09601 288 aa19.12■□□□□ 0.65
HDDC2-206ENST00000608461 ITGB4P16144 1822 aa19.11■□□□□ 0.65
HDDC2-206ENST00000608461 TOGARAM1Q9Y4F4 1720 aa19.11■□□□□ 0.65
HDDC2-206ENST00000608461 MYBBP1AQ9BQG0 1328 aaKnown RBP19.1■□□□□ 0.65
HDDC2-206ENST00000608461 FCHSD2O94868 740 aa19.1■□□□□ 0.65
HDDC2-206ENST00000608461 AKAP4Q5JQC9 854 aa19.1■□□□□ 0.65
HDDC2-206ENST00000608461 MPRIPQ6WCQ1 1025 aa19.1■□□□□ 0.65
HDDC2-206ENST00000608461 SMARCC1Q92922 1105 aaPredicted RBP19.1■□□□□ 0.65
HDDC2-206ENST00000608461 LY75O60449 1722 aa19.09■□□□□ 0.65
HDDC2-206ENST00000608461 TMOD3Q9NYL9 352 aa19.09■□□□□ 0.65
HDDC2-206ENST00000608461 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
HDDC2-206ENST00000608461 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
HDDC2-206ENST00000608461 GAS2L2Q8NHY3 880 aa19.07■□□□□ 0.64
HDDC2-206ENST00000608461 PIGBQ92521 554 aa19.07■□□□□ 0.64
HDDC2-206ENST00000608461 RSPH6AQ9H0K4 717 aa19.07■□□□□ 0.64
HDDC2-206ENST00000608461 PNNQ9H307 717 aaKnown RBP19.06■□□□□ 0.64
HDDC2-206ENST00000608461 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
HDDC2-206ENST00000608461 R3HDM1Q15032 1099 aaKnown RBP19.05■□□□□ 0.64
HDDC2-206ENST00000608461 MTHFSDQ2M296 383 aaKnown RBP19.05■□□□□ 0.64
HDDC2-206ENST00000608461 STK32BQ9NY57 414 aa19.05■□□□□ 0.64
HDDC2-206ENST00000608461 KDM6AO15550 1401 aaPredicted RBP19.05■□□□□ 0.64
HDDC2-206ENST00000608461 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
HDDC2-206ENST00000608461 PALLDQ8WX93 1383 aa19.04■□□□□ 0.64
HDDC2-206ENST00000608461 PRKAR2BP31323 418 aa19.03■□□□□ 0.64
HDDC2-206ENST00000608461 CABP4P57796 275 aa19.03■□□□□ 0.64
HDDC2-206ENST00000608461 SLC15A2Q16348 729 aa19.03■□□□□ 0.64
HDDC2-206ENST00000608461 LRRC4BQ9NT99 713 aa19.03■□□□□ 0.64
HDDC2-206ENST00000608461 CCNL1Q9UK58 526 aaPredicted RBP19.03■□□□□ 0.64
HDDC2-206ENST00000608461 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
HDDC2-206ENST00000608461 PSDA5PKW4 1024 aaPredicted RBP19.02■□□□□ 0.64
HDDC2-206ENST00000608461 NEFMP07197 916 aa19.02■□□□□ 0.64
HDDC2-206ENST00000608461 ADAMTS7Q9UKP4 1686 aa19.01■□□□□ 0.63
HDDC2-206ENST00000608461 GNAT3A8MTJ3 354 aa19.01■□□□□ 0.63
HDDC2-206ENST00000608461 ANO8Q9HCE9 1232 aaPredicted RBP19■□□□□ 0.63
HDDC2-206ENST00000608461 ZNF831Q5JPB2 1677 aa18.99■□□□□ 0.63
HDDC2-206ENST00000608461 MAP3K5Q99683 1374 aa18.99■□□□□ 0.63
HDDC2-206ENST00000608461 RNMTO43148 476 aaKnown RBP18.99■□□□□ 0.63
HDDC2-206ENST00000608461 NFATC2IPQ8NCF5 419 aa18.99■□□□□ 0.63
HDDC2-206ENST00000608461 PHACTR3Q96KR7 559 aa18.99■□□□□ 0.63
HDDC2-206ENST00000608461 SLC52A2Q9HAB3 445 aa18.99■□□□□ 0.63
HDDC2-206ENST00000608461 ATG3Q9NT62 314 aa18.99■□□□□ 0.63
HDDC2-206ENST00000608461 MRC1P22897 1456 aa18.98■□□□□ 0.63
HDDC2-206ENST00000608461 VIRMAQ69YN4 1812 aaKnown RBP18.98■□□□□ 0.63
HDDC2-206ENST00000608461 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
HDDC2-206ENST00000608461 ASAP1Q9ULH1 1129 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms