RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 CCDC125Q86Z20 511 aa7.76□□□□□ -1.17
LINC00343-210ENST00000608220 PCDHB11Q9Y5F2 797 aa7.76□□□□□ -1.17
LINC00343-210ENST00000608220 ATP5J2-PTCD1G3V325 749 aa7.75□□□□□ -1.17
LINC00343-210ENST00000608220 ABL2P42684 1182 aa7.75□□□□□ -1.17
LINC00343-210ENST00000608220 CC2D2BQ6DHV5 1058 aa7.75□□□□□ -1.17
LINC00343-210ENST00000608220 MEN1O00255 615 aa7.74□□□□□ -1.17
LINC00343-210ENST00000608220 CCDC155Q8N6L0 562 aa7.74□□□□□ -1.17
LINC00343-210ENST00000608220 KDF1Q8NAX2 398 aaPredicted RBP7.74□□□□□ -1.17
LINC00343-210ENST00000608220 RNF217Q8TC41 542 aa7.74□□□□□ -1.17
LINC00343-210ENST00000608220 GDPD2Q9HCC8 539 aa7.74□□□□□ -1.17
LINC00343-210ENST00000608220 STK17AQ9UEE5 414 aa7.74□□□□□ -1.17
LINC00343-210ENST00000608220 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
LINC00343-210ENST00000608220 ERVK-9P63128 1117 aa7.73□□□□□ -1.17
LINC00343-210ENST00000608220 EIF4G2P78344 907 aaKnown RBP eCLIP7.73□□□□□ -1.17
LINC00343-210ENST00000608220 FOXD4L5Q5VV16 416 aaPredicted RBP7.73□□□□□ -1.17
LINC00343-210ENST00000608220 SCTRP47872 440 aa7.72□□□□□ -1.17
LINC00343-210ENST00000608220 LYSMD3Q7Z3D4 306 aa7.72□□□□□ -1.17
LINC00343-210ENST00000608220 PRICKLE2Q7Z3G6 844 aa7.72□□□□□ -1.17
LINC00343-210ENST00000608220 ZSCAN1Q8NBB4 408 aa7.72□□□□□ -1.17
LINC00343-210ENST00000608220 CEP126Q9P2H0 1117 aa7.72□□□□□ -1.17
LINC00343-210ENST00000608220 A0A1W2PRU2 124 aa7.71□□□□□ -1.18
LINC00343-210ENST00000608220 CDC14CA4D256 554 aa7.71□□□□□ -1.18
LINC00343-210ENST00000608220 SLC35F4A4IF30 521 aa7.71□□□□□ -1.18
LINC00343-210ENST00000608220 VAC14Q08AM6 782 aa7.71□□□□□ -1.18
LINC00343-210ENST00000608220 IRF5Q13568 498 aa7.71□□□□□ -1.18
LINC00343-210ENST00000608220 CYP2U1Q7Z449 544 aa7.71□□□□□ -1.18
LINC00343-210ENST00000608220 NLRP3Q96P20 1036 aa7.71□□□□□ -1.18
LINC00343-210ENST00000608220 HMGXB3Q12766 1538 aa7.7□□□□□ -1.18
LINC00343-210ENST00000608220 MYCP01106 439 aaPredicted RBP7.7□□□□□ -1.18
LINC00343-210ENST00000608220 RHOQP17081 205 aa7.7□□□□□ -1.18
LINC00343-210ENST00000608220 NCAPD3P42695 1498 aa7.69□□□□□ -1.18
LINC00343-210ENST00000608220 SMARCA2P51531 1590 aa7.69□□□□□ -1.18
LINC00343-210ENST00000608220 FAM181BA6NEQ2 426 aa7.69□□□□□ -1.18
LINC00343-210ENST00000608220 ITGA6P23229 1130 aa7.69□□□□□ -1.18
LINC00343-210ENST00000608220 RNF144AP50876 292 aaPredicted RBP7.69□□□□□ -1.18
LINC00343-210ENST00000608220 SLFNL1Q499Z3 407 aa7.69□□□□□ -1.18
LINC00343-210ENST00000608220 SLC27A3Q5K4L6 730 aa7.69□□□□□ -1.18
LINC00343-210ENST00000608220 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
LINC00343-210ENST00000608220 CCDC85AQ96PX6 553 aaPredicted RBP7.69□□□□□ -1.18
LINC00343-210ENST00000608220 CDCA7Q9BWT1 371 aaPredicted RBP7.69□□□□□ -1.18
LINC00343-210ENST00000608220 ERCC6Q03468 1493 aa7.68□□□□□ -1.18
LINC00343-210ENST00000608220 MCM6Q14566 821 aa7.68□□□□□ -1.18
LINC00343-210ENST00000608220 GPR161Q8N6U8 529 aaKnown RBP7.68□□□□□ -1.18
LINC00343-210ENST00000608220 OSBPL3Q9H4L5 887 aa7.68□□□□□ -1.18
LINC00343-210ENST00000608220 ARHGEF10LQ9HCE6 1279 aa7.68□□□□□ -1.18
LINC00343-210ENST00000608220 SENP3-EIF4A1A0A087X0R7 540 aa7.67□□□□□ -1.18
LINC00343-210ENST00000608220 WASHC4Q2M389 1173 aa7.67□□□□□ -1.18
LINC00343-210ENST00000608220 SV2AQ7L0J3 742 aa7.67□□□□□ -1.18
LINC00343-210ENST00000608220 RNF135Q8IUD6 432 aa7.67□□□□□ -1.18
LINC00343-210ENST00000608220 RAB6BQ9NRW1 208 aa7.67□□□□□ -1.18
LINC00343-210ENST00000608220 DOLKQ9UPQ8 538 aa7.67□□□□□ -1.18
LINC00343-210ENST00000608220 GPC1P35052 558 aa7.66□□□□□ -1.18
LINC00343-210ENST00000608220 SEMA3FQ13275 785 aa7.66□□□□□ -1.18
LINC00343-210ENST00000608220 CLN3Q13286 438 aa7.66□□□□□ -1.18
LINC00343-210ENST00000608220 TSGA10IPQ3SY00 556 aa7.66□□□□□ -1.18
LINC00343-210ENST00000608220 NANOS1Q8WY41 292 aaKnown RBP7.66□□□□□ -1.18
LINC00343-210ENST00000608220 CNTNAP3BQ96NU0 1288 aa7.66□□□□□ -1.18
LINC00343-210ENST00000608220 CNTNAP3Q9BZ76 1288 aa7.66□□□□□ -1.18
LINC00343-210ENST00000608220 TRAK2O60296 914 aa7.65□□□□□ -1.18
LINC00343-210ENST00000608220 POU4F2Q12837 409 aa7.65□□□□□ -1.18
LINC00343-210ENST00000608220 OXLD1Q5BKU9 147 aa7.65□□□□□ -1.18
LINC00343-210ENST00000608220 COL25A1Q9BXS0 654 aaPredicted RBP7.65□□□□□ -1.18
LINC00343-210ENST00000608220 SMARCA4P51532 1647 aa7.64□□□□□ -1.19
LINC00343-210ENST00000608220 GNRH1P01148 92 aa7.64□□□□□ -1.19
LINC00343-210ENST00000608220 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
LINC00343-210ENST00000608220 USP4Q13107 963 aa7.64□□□□□ -1.19
LINC00343-210ENST00000608220 RIPOR1Q6ZS17 1223 aa7.64□□□□□ -1.19
LINC00343-210ENST00000608220 COG6Q9Y2V7 657 aa7.64□□□□□ -1.19
LINC00343-210ENST00000608220 ATAD2BQ9ULI0 1458 aa7.63□□□□□ -1.19
LINC00343-210ENST00000608220 WWC1Q8IX03 1113 aa7.63□□□□□ -1.19
LINC00343-210ENST00000608220 PHTF2Q8N3S3 785 aa7.63□□□□□ -1.19
LINC00343-210ENST00000608220 CNKSR1Q969H4 720 aa7.63□□□□□ -1.19
LINC00343-210ENST00000608220 GAS2L1Q99501 681 aaPredicted RBP7.63□□□□□ -1.19
LINC00343-210ENST00000608220 RAD21O60216 631 aa7.62□□□□□ -1.19
LINC00343-210ENST00000608220 KRT76Q01546 638 aa7.62□□□□□ -1.19
LINC00343-210ENST00000608220 ESYT1Q9BSJ8 1104 aa7.62□□□□□ -1.19
LINC00343-210ENST00000608220 GRIP2Q9C0E4 1043 aa7.62□□□□□ -1.19
LINC00343-210ENST00000608220 CUEDC1Q9NWM3 386 aaPredicted RBP7.62□□□□□ -1.19
LINC00343-210ENST00000608220 BAZ1AQ9NRL2 1556 aaPredicted RBP7.62□□□□□ -1.19
LINC00343-210ENST00000608220 IL2RAP01589 272 aa7.61□□□□□ -1.19
LINC00343-210ENST00000608220 GTF2E1P29083 439 aaPredicted RBP7.61□□□□□ -1.19
LINC00343-210ENST00000608220 CENPCQ03188 943 aa7.61□□□□□ -1.19
LINC00343-210ENST00000608220 ESCO1Q5FWF5 840 aa7.61□□□□□ -1.19
LINC00343-210ENST00000608220 RNFT1Q5M7Z0 435 aa7.61□□□□□ -1.19
LINC00343-210ENST00000608220 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
LINC00343-210ENST00000608220 NBPF15Q8N660 670 aa7.61□□□□□ -1.19
LINC00343-210ENST00000608220 SIRT1Q96EB6 747 aa7.61□□□□□ -1.19
LINC00343-210ENST00000608220 PEG3Q9GZU2 1588 aa7.61□□□□□ -1.19
LINC00343-210ENST00000608220 LAMC3Q9Y6N6 1575 aa7.6□□□□□ -1.19
LINC00343-210ENST00000608220 SOX11P35716 441 aa7.6□□□□□ -1.19
LINC00343-210ENST00000608220 TAS1R3Q7RTX0 852 aa7.6□□□□□ -1.19
LINC00343-210ENST00000608220 POM121Q96HA1 1249 aa7.6□□□□□ -1.19
LINC00343-210ENST00000608220 ZSCAN10Q96SZ4 725 aaPredicted RBP7.6□□□□□ -1.19
LINC00343-210ENST00000608220 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
LINC00343-210ENST00000608220 DYRK1BQ9Y463 629 aa7.6□□□□□ -1.19
LINC00343-210ENST00000608220 WASLO00401 505 aaPredicted RBP7.59□□□□□ -1.19
LINC00343-210ENST00000608220 UBTFP17480 764 aaKnown RBP7.59□□□□□ -1.19
LINC00343-210ENST00000608220 PHKA2P46019 1235 aa7.59□□□□□ -1.19
LINC00343-210ENST00000608220 FLIIQ13045 1269 aa7.59□□□□□ -1.19
LINC00343-210ENST00000608220 TMEM214Q6NUQ4 689 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms