RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 BRWD3Q6RI45 1802 aa13.63□□□□□ -0.23
ITGB5-211ENST00000608107 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
ITGB5-211ENST00000608107 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
ITGB5-211ENST00000608107 THRAP3Q9Y2W1 955 aaKnown RBP13.63□□□□□ -0.23
ITGB5-211ENST00000608107 PKD1L3Q7Z443 1732 aa13.63□□□□□ -0.23
ITGB5-211ENST00000608107 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
ITGB5-211ENST00000608107 OVOS2A0A0G2JMS6 1433 aa13.62□□□□□ -0.23
ITGB5-211ENST00000608107 THSD7AQ9UPZ6 1657 aa13.62□□□□□ -0.23
ITGB5-211ENST00000608107 KAT6BQ8WYB5 2073 aa13.62□□□□□ -0.23
ITGB5-211ENST00000608107 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
ITGB5-211ENST00000608107 APAF1O14727 1248 aa13.61□□□□□ -0.23
ITGB5-211ENST00000608107 MTHFSDQ2M296 383 aaKnown RBP13.61□□□□□ -0.23
ITGB5-211ENST00000608107 RUNDC1Q96C34 613 aa13.61□□□□□ -0.23
ITGB5-211ENST00000608107 A0A0G2JS52 829 aa13.6□□□□□ -0.23
ITGB5-211ENST00000608107 RBM6P78332 1123 aaKnown RBP13.6□□□□□ -0.23
ITGB5-211ENST00000608107 MYT1Q01538 1121 aa13.6□□□□□ -0.23
ITGB5-211ENST00000608107 RRP7AQ9Y3A4 280 aaKnown RBP13.6□□□□□ -0.23
ITGB5-211ENST00000608107 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
ITGB5-211ENST00000608107 RXRBP28702 533 aa13.59□□□□□ -0.23
ITGB5-211ENST00000608107 PLEKHO1Q53GL0 409 aaPredicted RBP13.59□□□□□ -0.23
ITGB5-211ENST00000608107 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
ITGB5-211ENST00000608107 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
ITGB5-211ENST00000608107 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
ITGB5-211ENST00000608107 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
ITGB5-211ENST00000608107 CYP27B1O15528 508 aa13.58□□□□□ -0.24
ITGB5-211ENST00000608107 TMPOP42166 694 aaKnown RBP13.58□□□□□ -0.24
ITGB5-211ENST00000608107 NEUROD2Q15784 382 aa13.58□□□□□ -0.24
ITGB5-211ENST00000608107 ZNF530Q6P9A1 599 aaPredicted RBP13.58□□□□□ -0.24
ITGB5-211ENST00000608107 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
ITGB5-211ENST00000608107 TNS2Q63HR2 1409 aa13.57□□□□□ -0.24
ITGB5-211ENST00000608107 EXOC5O00471 708 aa13.57□□□□□ -0.24
ITGB5-211ENST00000608107 NFE2L2Q16236 605 aa13.57□□□□□ -0.24
ITGB5-211ENST00000608107 DDB1Q16531 1140 aa13.57□□□□□ -0.24
ITGB5-211ENST00000608107 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
ITGB5-211ENST00000608107 CDCA7Q9BWT1 371 aaPredicted RBP13.57□□□□□ -0.24
ITGB5-211ENST00000608107 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
ITGB5-211ENST00000608107 NEFMP07197 916 aa13.56□□□□□ -0.24
ITGB5-211ENST00000608107 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
ITGB5-211ENST00000608107 FAM182BQ5T319 152 aa13.56□□□□□ -0.24
ITGB5-211ENST00000608107 MARCH10Q8NA82 808 aaPredicted RBP13.56□□□□□ -0.24
ITGB5-211ENST00000608107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.24
ITGB5-211ENST00000608107 RGS12O14924 1447 aa13.56□□□□□ -0.24
ITGB5-211ENST00000608107 PHKG2P15735 406 aa13.55□□□□□ -0.24
ITGB5-211ENST00000608107 RIPK4P57078 832 aa13.55□□□□□ -0.24
ITGB5-211ENST00000608107 DCTN1Q14203 1278 aa13.55□□□□□ -0.24
ITGB5-211ENST00000608107 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
ITGB5-211ENST00000608107 SCN11AQ9UI33 1791 aa13.55□□□□□ -0.24
ITGB5-211ENST00000608107 PCDH11XQ9BZA7 1347 aa13.54□□□□□ -0.24
ITGB5-211ENST00000608107 PCDH11YQ9BZA8 1340 aa13.54□□□□□ -0.24
ITGB5-211ENST00000608107 TOGARAM1Q9Y4F4 1720 aa13.53□□□□□ -0.24
ITGB5-211ENST00000608107 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
ITGB5-211ENST00000608107 C1orf141Q5JVX7 400 aa13.53□□□□□ -0.24
ITGB5-211ENST00000608107 MPRIPQ6WCQ1 1025 aa13.53□□□□□ -0.24
ITGB5-211ENST00000608107 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
ITGB5-211ENST00000608107 THUMPD2Q9BTF0 503 aaKnown RBP13.53□□□□□ -0.24
ITGB5-211ENST00000608107 LGR6Q9HBX8 967 aa13.53□□□□□ -0.24
ITGB5-211ENST00000608107 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
ITGB5-211ENST00000608107 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
ITGB5-211ENST00000608107 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
ITGB5-211ENST00000608107 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
ITGB5-211ENST00000608107 MCM10Q7L590 875 aa13.52□□□□□ -0.25
ITGB5-211ENST00000608107 IL17REQ8NFR9 667 aa13.52□□□□□ -0.25
ITGB5-211ENST00000608107 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
ITGB5-211ENST00000608107 PLEKHG2Q9H7P9 1386 aa13.52□□□□□ -0.25
ITGB5-211ENST00000608107 KDM6AO15550 1401 aaPredicted RBP13.52□□□□□ -0.25
ITGB5-211ENST00000608107 ITGB4P16144 1822 aa13.52□□□□□ -0.25
ITGB5-211ENST00000608107 SBF2Q86WG5 1849 aa13.51□□□□□ -0.25
ITGB5-211ENST00000608107 DOT1LQ8TEK3 1739 aa13.51□□□□□ -0.25
ITGB5-211ENST00000608107 ADAMTS7Q9UKP4 1686 aa13.51□□□□□ -0.25
ITGB5-211ENST00000608107 PDE3BQ13370 1112 aa13.51□□□□□ -0.25
ITGB5-211ENST00000608107 RNMTO43148 476 aaKnown RBP13.5□□□□□ -0.25
ITGB5-211ENST00000608107 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
ITGB5-211ENST00000608107 KRT27Q7Z3Y8 459 aa13.5□□□□□ -0.25
ITGB5-211ENST00000608107 WWC1Q8IX03 1113 aa13.49□□□□□ -0.25
ITGB5-211ENST00000608107 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
ITGB5-211ENST00000608107 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
ITGB5-211ENST00000608107 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
ITGB5-211ENST00000608107 DCAF5Q96JK2 942 aa13.48□□□□□ -0.25
ITGB5-211ENST00000608107 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
ITGB5-211ENST00000608107 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
ITGB5-211ENST00000608107 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
ITGB5-211ENST00000608107 CEMIPQ8WUJ3 1361 aa13.46□□□□□ -0.25
ITGB5-211ENST00000608107 ZNF521Q96K83 1311 aa13.46□□□□□ -0.25
ITGB5-211ENST00000608107 KCNQ2O43526 872 aa13.46□□□□□ -0.25
ITGB5-211ENST00000608107 PRIM1P49642 420 aaKnown RBP13.46□□□□□ -0.25
ITGB5-211ENST00000608107 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.25
ITGB5-211ENST00000608107 CCDC27Q2M243 656 aa13.46□□□□□ -0.25
ITGB5-211ENST00000608107 SPINK5Q9NQ38 1064 aaPredicted RBP13.45□□□□□ -0.26
ITGB5-211ENST00000608107 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
ITGB5-211ENST00000608107 MRC1P22897 1456 aa13.44□□□□□ -0.26
ITGB5-211ENST00000608107 CABP4P57796 275 aa13.44□□□□□ -0.26
ITGB5-211ENST00000608107 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
ITGB5-211ENST00000608107 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
ITGB5-211ENST00000608107 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
ITGB5-211ENST00000608107 CDCA7LQ96GN5 454 aa13.44□□□□□ -0.26
ITGB5-211ENST00000608107 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
ITGB5-211ENST00000608107 LAS1LQ9Y4W2 734 aaKnown RBP13.44□□□□□ -0.26
ITGB5-211ENST00000608107 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
ITGB5-211ENST00000608107 BTAF1O14981 1849 aa13.43□□□□□ -0.26
ITGB5-211ENST00000608107 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms