RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ITPKCQ96DU7 683 aa7.55□□□□□ -1.2
RNU6-88P-201ENST00000606801 MKRN1Q9UHC7 482 aaKnown RBP7.55□□□□□ -1.2
RNU6-88P-201ENST00000606801 PCDHB11Q9Y5F2 797 aa7.55□□□□□ -1.2
RNU6-88P-201ENST00000606801 LILRA1O75019 489 aa7.54□□□□□ -1.2
RNU6-88P-201ENST00000606801 DKK1O94907 266 aa7.54□□□□□ -1.2
RNU6-88P-201ENST00000606801 PPP1R26Q5T8A7 1209 aaPredicted RBP7.54□□□□□ -1.2
RNU6-88P-201ENST00000606801 TRIM46Q7Z4K8 759 aa7.54□□□□□ -1.2
RNU6-88P-201ENST00000606801 ZFAND3Q9H8U3 227 aa7.54□□□□□ -1.2
RNU6-88P-201ENST00000606801 VRTNQ9H8Y1 702 aa7.54□□□□□ -1.2
RNU6-88P-201ENST00000606801 EMILIN1Q9Y6C2 1016 aa7.54□□□□□ -1.2
RNU6-88P-201ENST00000606801 C11orf95C9JLR9 678 aaPredicted RBP7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 ATG7O95352 703 aa7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 BMP1P13497 986 aa7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 ADD1P35611 737 aaKnown RBP7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 CLDN10P78369 228 aa7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 CRTC2Q53ET0 693 aaPredicted RBP7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 SENP2Q9HC62 589 aa7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 PCDHGA11Q9Y5H2 935 aa7.53□□□□□ -1.2
RNU6-88P-201ENST00000606801 ERVK-9P63128 1117 aa7.52□□□□□ -1.21
RNU6-88P-201ENST00000606801 PTK7Q13308 1070 aa7.52□□□□□ -1.21
RNU6-88P-201ENST00000606801 EML3Q32P44 896 aa7.52□□□□□ -1.21
RNU6-88P-201ENST00000606801 CCDC125Q86Z20 511 aa7.52□□□□□ -1.21
RNU6-88P-201ENST00000606801 HOMEZQ8IX15 550 aa7.52□□□□□ -1.21
RNU6-88P-201ENST00000606801 ZNF784Q8NCA9 323 aaPredicted RBP7.52□□□□□ -1.21
RNU6-88P-201ENST00000606801 TRIM47Q96LD4 638 aa7.52□□□□□ -1.21
RNU6-88P-201ENST00000606801 KIAA1024Q9UPX6 916 aa7.52□□□□□ -1.21
RNU6-88P-201ENST00000606801 MRPL14Q6P1L8 145 aaKnown RBP7.51□□□□□ -1.21
RNU6-88P-201ENST00000606801 KIFC2Q96AC6 838 aa7.51□□□□□ -1.21
RNU6-88P-201ENST00000606801 OSBPL3Q9H4L5 887 aa7.51□□□□□ -1.21
RNU6-88P-201ENST00000606801 ZMIZ1Q9ULJ6 1067 aa7.51□□□□□ -1.21
RNU6-88P-201ENST00000606801 CARNS1A5YM72 827 aa7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 ATP5J2-PTCD1G3V325 749 aa7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 SNRPBP14678 240 aaKnown RBP7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 DHX9Q08211 1270 aaKnown RBP7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP4Q13107 963 aa7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 OGFOD1Q8N543 542 aa7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 KDF1Q8NAX2 398 aaPredicted RBP7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 RETREG2Q8NC44 543 aa7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 ZFP42Q96MM3 310 aa7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 CYLDQ9NQC7 956 aa7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 NOD1Q9Y239 953 aa7.5□□□□□ -1.21
RNU6-88P-201ENST00000606801 FAM196BA6NMK8 535 aa7.49□□□□□ -1.21
RNU6-88P-201ENST00000606801 STAU1O95793 577 aaKnown RBP7.49□□□□□ -1.21
RNU6-88P-201ENST00000606801 RASA1P20936 1047 aa7.49□□□□□ -1.21
RNU6-88P-201ENST00000606801 GTF2IP78347 998 aa7.49□□□□□ -1.21
RNU6-88P-201ENST00000606801 ELOAQ14241 798 aaKnown RBP7.49□□□□□ -1.21
RNU6-88P-201ENST00000606801 CC2D2BQ6DHV5 1058 aa7.49□□□□□ -1.21
RNU6-88P-201ENST00000606801 ZNF775Q96BV0 537 aaPredicted RBP7.49□□□□□ -1.21
RNU6-88P-201ENST00000606801 PGPEP1Q9NXJ5 209 aa7.49□□□□□ -1.21
RNU6-88P-201ENST00000606801 TMEM88BA6NKF7 163 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L15C9J2P7 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L10C9JJH3 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L13C9JLJ4 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L12C9JPN9 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L11C9JVI0 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L21D6R901 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L18D6R9N7 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L22D6RA61 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L17D6RBQ6 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L19D6RCP7 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L20D6RJB6 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 USP17L24Q0WX57 530 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 MEIOBQ8N635 442 aa7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 ACIN1Q9UKV3 1341 aaKnown RBP7.48□□□□□ -1.21
RNU6-88P-201ENST00000606801 CBLBQ13191 982 aa7.47□□□□□ -1.21
RNU6-88P-201ENST00000606801 SCARF1Q14162 830 aa7.47□□□□□ -1.21
RNU6-88P-201ENST00000606801 Q6ZVU0 165 aa7.47□□□□□ -1.21
RNU6-88P-201ENST00000606801 LARGE2Q8N3Y3 721 aa7.47□□□□□ -1.21
RNU6-88P-201ENST00000606801 STK32AQ8WU08 396 aa7.47□□□□□ -1.21
RNU6-88P-201ENST00000606801 PURBQ96QR8 312 aaKnown RBP7.47□□□□□ -1.21
RNU6-88P-201ENST00000606801 DNAAF2Q9NVR5 837 aaKnown RBP7.47□□□□□ -1.21
RNU6-88P-201ENST00000606801 FAM69CQ0P6D2 419 aa7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 DPYDQ12882 1025 aa7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 TRIM50Q86XT4 487 aa7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 SIX5Q8N196 739 aa7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 SIRT1Q96EB6 747 aa7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 SLAIN2Q9P270 581 aa7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 NOVA2Q9UNW9 492 aaKnown RBP7.46□□□□□ -1.22
RNU6-88P-201ENST00000606801 TMEM229AB2RXF0 380 aa7.45□□□□□ -1.22
RNU6-88P-201ENST00000606801 UPP2O95045 317 aa7.45□□□□□ -1.22
RNU6-88P-201ENST00000606801 SCNN1DP51172 638 aa7.45□□□□□ -1.22
RNU6-88P-201ENST00000606801 TMEM164Q5U3C3 297 aa7.45□□□□□ -1.22
RNU6-88P-201ENST00000606801 CCDC102BQ68D86 513 aa7.45□□□□□ -1.22
RNU6-88P-201ENST00000606801 LARP1Q6PKG0 1096 aaKnown RBP7.45□□□□□ -1.22
RNU6-88P-201ENST00000606801 ZNF594Q96JF6 807 aaPredicted RBP7.45□□□□□ -1.22
RNU6-88P-201ENST00000606801 TSEN34Q9BSV6 310 aaKnown RBP7.45□□□□□ -1.22
RNU6-88P-201ENST00000606801 MYCP01106 439 aaPredicted RBP7.44□□□□□ -1.22
RNU6-88P-201ENST00000606801 BMP2P12643 396 aa7.44□□□□□ -1.22
RNU6-88P-201ENST00000606801 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
RNU6-88P-201ENST00000606801 C6orf118Q5T5N4 469 aa7.44□□□□□ -1.22
RNU6-88P-201ENST00000606801 SFI1A8K8P3 1242 aa7.43□□□□□ -1.22
RNU6-88P-201ENST00000606801 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.43□□□□□ -1.22
RNU6-88P-201ENST00000606801 TPCN2Q8NHX9 752 aa7.43□□□□□ -1.22
RNU6-88P-201ENST00000606801 ETNK1Q9HBU6 452 aa7.43□□□□□ -1.22
RNU6-88P-201ENST00000606801 ADH1AP07327 375 aa7.42□□□□□ -1.22
RNU6-88P-201ENST00000606801 FAM200AQ8TCP9 573 aa7.42□□□□□ -1.22
RNU6-88P-201ENST00000606801 AGBL1Q96MI9 1066 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms