RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
CTSA-213ENST00000606782 STK32BQ9NY57 414 aa18.46■□□□□ 0.55
CTSA-213ENST00000606782 SHANK3Q9BYB0 1731 aa18.46■□□□□ 0.55
CTSA-213ENST00000606782 PDGFDQ9GZP0 370 aaPredicted RBP18.45■□□□□ 0.54
CTSA-213ENST00000606782 RAPGEF4Q8WZA2 1011 aa18.44■□□□□ 0.54
CTSA-213ENST00000606782 EMILIN1Q9Y6C2 1016 aa18.44■□□□□ 0.54
CTSA-213ENST00000606782 PAPPAQ13219 1627 aa18.44■□□□□ 0.54
CTSA-213ENST00000606782 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
CTSA-213ENST00000606782 ANKRD26Q9UPS8 1709 aa18.43■□□□□ 0.54
CTSA-213ENST00000606782 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
CTSA-213ENST00000606782 SLC27A3Q5K4L6 730 aa18.43■□□□□ 0.54
CTSA-213ENST00000606782 LRRC4BQ9NT99 713 aa18.43■□□□□ 0.54
CTSA-213ENST00000606782 NSD2O96028 1365 aa18.42■□□□□ 0.54
CTSA-213ENST00000606782 TATP17735 454 aaPredicted RBP18.42■□□□□ 0.54
CTSA-213ENST00000606782 PRIM1P49642 420 aaKnown RBP18.42■□□□□ 0.54
CTSA-213ENST00000606782 USHBP1Q8N6Y0 703 aa18.42■□□□□ 0.54
CTSA-213ENST00000606782 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
CTSA-213ENST00000606782 PTGER2P43116 358 aa18.4■□□□□ 0.54
CTSA-213ENST00000606782 MAP2P11137 1827 aaKnown RBP18.39■□□□□ 0.54
CTSA-213ENST00000606782 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
CTSA-213ENST00000606782 DOT1LQ8TEK3 1739 aa18.38■□□□□ 0.53
CTSA-213ENST00000606782 ZBTB7AO95365 584 aa18.38■□□□□ 0.53
CTSA-213ENST00000606782 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
CTSA-213ENST00000606782 PANK3Q9H999 370 aa18.38■□□□□ 0.53
CTSA-213ENST00000606782 PPP1R1BQ9UD71 204 aaPredicted RBP18.38■□□□□ 0.53
CTSA-213ENST00000606782 PCDH11XQ9BZA7 1347 aa18.38■□□□□ 0.53
CTSA-213ENST00000606782 PCDH11YQ9BZA8 1340 aa18.38■□□□□ 0.53
CTSA-213ENST00000606782 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
CTSA-213ENST00000606782 SYTL4Q96C24 671 aaPredicted RBP18.37■□□□□ 0.53
CTSA-213ENST00000606782 SGIP1Q9BQI5 828 aa18.37■□□□□ 0.53
CTSA-213ENST00000606782 POLR3GLQ9BT43 218 aa18.37■□□□□ 0.53
CTSA-213ENST00000606782 CYP27B1O15528 508 aa18.36■□□□□ 0.53
CTSA-213ENST00000606782 LY75O60449 1722 aa18.36■□□□□ 0.53
CTSA-213ENST00000606782 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
CTSA-213ENST00000606782 NKX1-1Q15270 411 aaPredicted RBP18.35■□□□□ 0.53
CTSA-213ENST00000606782 EYA1Q99502 592 aa18.35■□□□□ 0.53
CTSA-213ENST00000606782 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTSA-213ENST00000606782 PKD1L3Q7Z443 1732 aa18.35■□□□□ 0.53
CTSA-213ENST00000606782 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
CTSA-213ENST00000606782 QSER1Q2KHR3 1735 aa18.34■□□□□ 0.53
CTSA-213ENST00000606782 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.53
CTSA-213ENST00000606782 SLC16A10Q8TF71 515 aa18.33■□□□□ 0.52
CTSA-213ENST00000606782 EIF4A2Q14240 407 aaKnown RBP18.31■□□□□ 0.52
CTSA-213ENST00000606782 SPG7Q9UQ90 795 aa18.31■□□□□ 0.52
CTSA-213ENST00000606782 PNPLA7Q6ZV29 1317 aa18.3■□□□□ 0.52
CTSA-213ENST00000606782 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
CTSA-213ENST00000606782 KCNQ4P56696 695 aa18.3■□□□□ 0.52
CTSA-213ENST00000606782 CCNL1Q9UK58 526 aaPredicted RBP18.3■□□□□ 0.52
CTSA-213ENST00000606782 TNNT2P45379 298 aaPredicted RBP18.29■□□□□ 0.52
CTSA-213ENST00000606782 IGSF1Q8N6C5 1336 aa18.28■□□□□ 0.52
CTSA-213ENST00000606782 COL24A1Q17RW2 1714 aa18.28■□□□□ 0.52
CTSA-213ENST00000606782 TOGARAM1Q9Y4F4 1720 aa18.27■□□□□ 0.52
CTSA-213ENST00000606782 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
CTSA-213ENST00000606782 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
CTSA-213ENST00000606782 ARXQ96QS3 562 aa18.27■□□□□ 0.52
CTSA-213ENST00000606782 SYT17Q9BSW7 474 aa18.27■□□□□ 0.52
CTSA-213ENST00000606782 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
CTSA-213ENST00000606782 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.52
CTSA-213ENST00000606782 MAP3K5Q99683 1374 aa18.27■□□□□ 0.51
CTSA-213ENST00000606782 KIF7Q2M1P5 1343 aa18.26■□□□□ 0.51
CTSA-213ENST00000606782 ITGB4P16144 1822 aa18.26■□□□□ 0.51
CTSA-213ENST00000606782 AMER1Q5JTC6 1135 aaPredicted RBP18.26■□□□□ 0.51
CTSA-213ENST00000606782 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
CTSA-213ENST00000606782 PIGBQ92521 554 aa18.26■□□□□ 0.51
CTSA-213ENST00000606782 FHDC1Q9C0D6 1143 aaPredicted RBP18.26■□□□□ 0.51
CTSA-213ENST00000606782 PALLDQ8WX93 1383 aa18.26■□□□□ 0.51
CTSA-213ENST00000606782 TUBGCP6Q96RT7 1819 aa18.26■□□□□ 0.51
CTSA-213ENST00000606782 PHKG2P15735 406 aa18.25■□□□□ 0.51
CTSA-213ENST00000606782 IFNL2Q8IZJ0 200 aa18.25■□□□□ 0.51
CTSA-213ENST00000606782 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
CTSA-213ENST00000606782 PER1O15534 1290 aaPredicted RBP18.23■□□□□ 0.51
CTSA-213ENST00000606782 COL23A1Q86Y22 540 aaPredicted RBP18.22■□□□□ 0.51
CTSA-213ENST00000606782 TAF1LQ8IZX4 1826 aa18.21■□□□□ 0.51
CTSA-213ENST00000606782 C5P01031 1676 aa18.21■□□□□ 0.51
CTSA-213ENST00000606782 POLD1P28340 1107 aa18.2■□□□□ 0.5
CTSA-213ENST00000606782 FLAD1Q8NFF5 587 aa18.2■□□□□ 0.5
CTSA-213ENST00000606782 TMOD3Q9NYL9 352 aa18.2■□□□□ 0.5
CTSA-213ENST00000606782 IL13P35225 146 aa18.19■□□□□ 0.5
CTSA-213ENST00000606782 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
CTSA-213ENST00000606782 PLEKHO1Q53GL0 409 aaPredicted RBP18.19■□□□□ 0.5
CTSA-213ENST00000606782 KDRP35968 1356 aa18.18■□□□□ 0.5
CTSA-213ENST00000606782 LOC102724428A0A0B4J2F2 783 aa18.18■□□□□ 0.5
CTSA-213ENST00000606782 ERVV-2B6SEH9 535 aa18.18■□□□□ 0.5
CTSA-213ENST00000606782 HSP90AB1P08238 724 aaKnown RBP18.18■□□□□ 0.5
CTSA-213ENST00000606782 YY1P25490 414 aa18.18■□□□□ 0.5
CTSA-213ENST00000606782 SIK1P57059 783 aa18.18■□□□□ 0.5
CTSA-213ENST00000606782 DCAF5Q96JK2 942 aa18.17■□□□□ 0.5
CTSA-213ENST00000606782 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
CTSA-213ENST00000606782 C4BP0C0L5 1744 aa18.16■□□□□ 0.5
CTSA-213ENST00000606782 ATG3Q9NT62 314 aa18.16■□□□□ 0.5
CTSA-213ENST00000606782 NPC1L1Q9UHC9 1359 aa18.16■□□□□ 0.5
CTSA-213ENST00000606782 AEBP1Q8IUX7 1158 aa18.15■□□□□ 0.5
CTSA-213ENST00000606782 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.49
CTSA-213ENST00000606782 ZNF530Q6P9A1 599 aaPredicted RBP18.14■□□□□ 0.49
CTSA-213ENST00000606782 MTHFSP49914 203 aa18.13■□□□□ 0.49
CTSA-213ENST00000606782 ITPK1Q13572 414 aa18.13■□□□□ 0.49
CTSA-213ENST00000606782 AMIGO3Q86WK7 504 aa18.13■□□□□ 0.49
CTSA-213ENST00000606782 LINC00116Q8NCU8 138 aa18.13■□□□□ 0.49
CTSA-213ENST00000606782 AK7Q96M32 723 aa18.13■□□□□ 0.49
CTSA-213ENST00000606782 UBR3Q6ZT12 1888 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms