RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PRDM11Q9NQV5 511 aa27.83■■■□□ 2.05
USP6NL-204ENST00000606752 MAP3K5Q99683 1374 aa27.83■■■□□ 2.05
USP6NL-204ENST00000606752 RGPD5Q99666 1765 aa27.83■■■□□ 2.05
USP6NL-204ENST00000606752 NLRP2Q9NX02 1062 aa27.83■■■□□ 2.05
USP6NL-204ENST00000606752 ROBO1Q9Y6N7 1651 aa27.82■■■□□ 2.04
USP6NL-204ENST00000606752 CRBNQ96SW2 442 aa27.82■■■□□ 2.04
USP6NL-204ENST00000606752 CAMTA1Q9Y6Y1 1673 aa27.82■■■□□ 2.04
USP6NL-204ENST00000606752 CSB-PGBD3P0DP91 1061 aa27.81■■■□□ 2.04
USP6NL-204ENST00000606752 PDE3AQ14432 1141 aa27.81■■■□□ 2.04
USP6NL-204ENST00000606752 B4GALNT3Q6L9W6 998 aa27.81■■■□□ 2.04
USP6NL-204ENST00000606752 CANXP27824 592 aaKnown RBP27.8■■■□□ 2.04
USP6NL-204ENST00000606752 BCL2L13Q9BXK5 485 aa27.8■■■□□ 2.04
USP6NL-204ENST00000606752 AHDC1Q5TGY3 1603 aaPredicted RBP27.8■■■□□ 2.04
USP6NL-204ENST00000606752 TOM1O60784 492 aa27.78■■■□□ 2.04
USP6NL-204ENST00000606752 VAMP4O75379 141 aa27.78■■■□□ 2.04
USP6NL-204ENST00000606752 SSH1Q8WYL5 1049 aa27.78■■■□□ 2.04
USP6NL-204ENST00000606752 FRAT1Q92837 279 aaPredicted RBP27.78■■■□□ 2.04
USP6NL-204ENST00000606752 LMO7Q8WWI1 1683 aa27.78■■■□□ 2.04
USP6NL-204ENST00000606752 ALDH1L2Q3SY69 923 aa27.78■■■□□ 2.04
USP6NL-204ENST00000606752 IL17REQ8NFR9 667 aa27.78■■■□□ 2.04
USP6NL-204ENST00000606752 SMC4Q9NTJ3 1288 aa27.78■■■□□ 2.04
USP6NL-204ENST00000606752 TSPYL6Q8N831 410 aa27.76■■■□□ 2.04
USP6NL-204ENST00000606752 CCDC136Q96JN2 1154 aa27.76■■■□□ 2.04
USP6NL-204ENST00000606752 AKAP4Q5JQC9 854 aa27.76■■■□□ 2.03
USP6NL-204ENST00000606752 ZNF530Q6P9A1 599 aaPredicted RBP27.76■■■□□ 2.03
USP6NL-204ENST00000606752 RAPGEF4Q8WZA2 1011 aa27.76■■■□□ 2.03
USP6NL-204ENST00000606752 TWISTNBQ3B726 338 aaPredicted RBP27.75■■■□□ 2.03
USP6NL-204ENST00000606752 AEBP2Q6ZN18 517 aaPredicted RBP27.75■■■□□ 2.03
USP6NL-204ENST00000606752 PELP1Q8IZL8 1130 aaKnown RBP27.75■■■□□ 2.03
USP6NL-204ENST00000606752 C8orf58Q8NAV2 365 aa27.75■■■□□ 2.03
USP6NL-204ENST00000606752 ABCA3Q99758 1704 aa27.73■■■□□ 2.03
USP6NL-204ENST00000606752 ELL2O00472 640 aaPredicted RBP27.72■■■□□ 2.03
USP6NL-204ENST00000606752 BABAM1Q9NWV8 329 aa27.72■■■□□ 2.03
USP6NL-204ENST00000606752 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
USP6NL-204ENST00000606752 TATP17735 454 aaPredicted RBP27.71■■■□□ 2.03
USP6NL-204ENST00000606752 BRPF1P55201 1214 aaPredicted RBP27.71■■■□□ 2.03
USP6NL-204ENST00000606752 C1orf141Q5JVX7 400 aa27.71■■■□□ 2.03
USP6NL-204ENST00000606752 FAM208AQ9UK61 1670 aaKnown RBP27.71■■■□□ 2.03
USP6NL-204ENST00000606752 WDR17Q8IZU2 1322 aa27.71■■■□□ 2.03
USP6NL-204ENST00000606752 ZKSCAN2Q63HK3 967 aa27.71■■■□□ 2.03
USP6NL-204ENST00000606752 MIS18AQ9NYP9 233 aa27.71■■■□□ 2.03
USP6NL-204ENST00000606752 CEMIPQ8WUJ3 1361 aa27.71■■■□□ 2.03
USP6NL-204ENST00000606752 PLEKHG2Q9H7P9 1386 aa27.71■■■□□ 2.03
USP6NL-204ENST00000606752 TAF7Q15545 349 aaPredicted RBP27.7■■■□□ 2.02
USP6NL-204ENST00000606752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.7■■■□□ 2.024e-6■□□□□ 11.2
USP6NL-204ENST00000606752 LRRC37A3O60309 1634 aa27.69■■■□□ 2.02
USP6NL-204ENST00000606752 KIF16BQ96L93 1317 aa27.68■■■□□ 2.02
USP6NL-204ENST00000606752 MS4A1P11836 297 aa27.68■■■□□ 2.02
USP6NL-204ENST00000606752 PANK1Q8TE04 598 aa27.68■■■□□ 2.02
USP6NL-204ENST00000606752 LGR6Q9HBX8 967 aa27.68■■■□□ 2.02
USP6NL-204ENST00000606752 PIP4K2BP78356 416 aa27.67■■■□□ 2.02
USP6NL-204ENST00000606752 COL5A2P05997 1499 aaPredicted RBP27.67■■■□□ 2.02
USP6NL-204ENST00000606752 IPO8O15397 1037 aaKnown RBP27.67■■■□□ 2.02
USP6NL-204ENST00000606752 TOM1L2Q6ZVM7 507 aa27.67■■■□□ 2.02
USP6NL-204ENST00000606752 NOB1Q9ULX3 412 aaKnown RBP27.67■■■□□ 2.02
USP6NL-204ENST00000606752 SPG7Q9UQ90 795 aa27.67■■■□□ 2.02
USP6NL-204ENST00000606752 RNMTO43148 476 aaKnown RBP27.64■■■□□ 2.02
USP6NL-204ENST00000606752 EVA1CP58658 441 aa27.64■■■□□ 2.02
USP6NL-204ENST00000606752 KRT24Q2M2I5 525 aa27.64■■■□□ 2.02
USP6NL-204ENST00000606752 ATF7IPQ6VMQ6 1270 aa27.64■■■□□ 2.02
USP6NL-204ENST00000606752 MPRIPQ6WCQ1 1025 aa27.64■■■□□ 2.02
USP6NL-204ENST00000606752 MRPL50Q8N5N7 158 aaKnown RBP27.64■■■□□ 2.02
USP6NL-204ENST00000606752 COG6Q9Y2V7 657 aa27.64■■■□□ 2.01
USP6NL-204ENST00000606752 MEGF6O75095 1541 aa27.63■■■□□ 2.01
USP6NL-204ENST00000606752 COL22A1Q8NFW1 1626 aaPredicted RBP27.63■■■□□ 2.01
USP6NL-204ENST00000606752 UBAP1LF5GYI3 381 aa27.63■■■□□ 2.01
USP6NL-204ENST00000606752 RLBP1P12271 317 aa27.63■■■□□ 2.01
USP6NL-204ENST00000606752 DZIP1LQ8IYY4 767 aaKnown RBP27.63■■■□□ 2.01
USP6NL-204ENST00000606752 CARD10Q9BWT7 1032 aa27.63■■■□□ 2.01
USP6NL-204ENST00000606752 TNNQ9UQP3 1299 aa27.63■■■□□ 2.01
USP6NL-204ENST00000606752 TRIM27P14373 513 aa27.62■■■□□ 2.01
USP6NL-204ENST00000606752 CLUAP1Q96AJ1 413 aa27.62■■■□□ 2.01
USP6NL-204ENST00000606752 TEFQ10587 303 aa27.62■■■□□ 2.01
USP6NL-204ENST00000606752 OVOS2A0A0G2JMS6 1433 aa27.62■■■□□ 2.01
USP6NL-204ENST00000606752 FTSJ3Q8IY81 847 aaKnown RBP27.61■■■□□ 2.01
USP6NL-204ENST00000606752 STRN4Q9NRL3 753 aa27.61■■■□□ 2.01
USP6NL-204ENST00000606752 ARHGAP45Q92619 1136 aa27.6■■■□□ 2.01
USP6NL-204ENST00000606752 PHLPP1O60346 1717 aa27.6■■■□□ 2.01
USP6NL-204ENST00000606752 COL16A1Q07092 1604 aaPredicted RBP27.6■■■□□ 2.01
USP6NL-204ENST00000606752 LARP1Q6PKG0 1096 aaKnown RBP27.6■■■□□ 2.01
USP6NL-204ENST00000606752 PHKG2P15735 406 aa27.58■■■□□ 2.01
USP6NL-204ENST00000606752 IFNL2Q8IZJ0 200 aa27.58■■■□□ 2.01
USP6NL-204ENST00000606752 BTG4Q9NY30 223 aa27.58■■■□□ 2.01
USP6NL-204ENST00000606752 SOS1Q07889 1333 aaPredicted RBP27.58■■■□□ 2.01
USP6NL-204ENST00000606752 TCERG1O14776 1098 aaKnown RBP27.57■■■□□ 2
USP6NL-204ENST00000606752 AAMPQ13685 434 aa27.57■■■□□ 2
USP6NL-204ENST00000606752 MVPQ14764 893 aaKnown RBP27.56■■■□□ 2
USP6NL-204ENST00000606752 BTBD11A6QL63 1104 aa27.54■■■□□ 2
USP6NL-204ENST00000606752 CYP27B1O15528 508 aa27.53■■■□□ 2
USP6NL-204ENST00000606752 IL2RBP14784 551 aa27.53■■■□□ 2
USP6NL-204ENST00000606752 HSP90AB1P08238 724 aaKnown RBP27.53■■■□□ 2
USP6NL-204ENST00000606752 COL14A1Q05707 1796 aaKnown RBP27.53■■■□□ 2
USP6NL-204ENST00000606752 ZCRB1Q8TBF4 217 aaKnown RBP27.52■■■□□ 2
USP6NL-204ENST00000606752 EIF4A1P60842 406 aaKnown RBP27.51■■□□□ 1.99
USP6NL-204ENST00000606752 DCAF5Q96JK2 942 aa27.51■■□□□ 1.99
USP6NL-204ENST00000606752 CERKQ8TCT0 537 aa27.51■■□□□ 1.99
USP6NL-204ENST00000606752 API5Q9BZZ5 524 aaKnown RBP27.51■■□□□ 1.99
USP6NL-204ENST00000606752 ADAMTS7Q9UKP4 1686 aa27.5■■□□□ 1.99
USP6NL-204ENST00000606752 PKD1L3Q7Z443 1732 aa27.5■■□□□ 1.99
USP6NL-204ENST00000606752 TMEM57Q8N5G2 664 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms