RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 PCGF6Q9BYE7 350 aa33.85■■■■□ 3.01
SNX5-219ENST00000606602 PAPPAQ13219 1627 aa33.85■■■■□ 3.01
SNX5-219ENST00000606602 HSP90AB2PQ58FF8 381 aa33.84■■■■□ 3.01
SNX5-219ENST00000606602 RAPGEF4Q8WZA2 1011 aa33.84■■■■□ 3.01
SNX5-219ENST00000606602 KAT6BQ8WYB5 2073 aa33.84■■■■□ 3.01
SNX5-219ENST00000606602 MYOM1P52179 1685 aa33.83■■■■□ 3.01
SNX5-219ENST00000606602 RGPD2P0DJD1 1756 aa33.83■■■■□ 3.01
SNX5-219ENST00000606602 INSRP06213 1382 aa33.82■■■■□ 3
SNX5-219ENST00000606602 CGNL1Q0VF96 1302 aa33.81■■■■□ 3
SNX5-219ENST00000606602 NSD3Q9BZ95 1437 aa33.8■■■■□ 3
SNX5-219ENST00000606602 AKT1S1Q96B36 256 aa33.8■■■■□ 3
SNX5-219ENST00000606602 SGIP1Q9BQI5 828 aa33.8■■■■□ 3
SNX5-219ENST00000606602 FHDC1Q9C0D6 1143 aaPredicted RBP33.8■■■■□ 3
SNX5-219ENST00000606602 FLT4P35916 1363 aa33.8■■■■□ 3
SNX5-219ENST00000606602 TATP17735 454 aaPredicted RBP33.79■■■■□ 3
SNX5-219ENST00000606602 CLSPNQ9HAW4 1339 aa33.79■■■■□ 3
SNX5-219ENST00000606602 KCNQ4P56696 695 aa33.78■■■■□ 3
SNX5-219ENST00000606602 KIF20BQ96Q89 1820 aa33.77■■■■□ 3
SNX5-219ENST00000606602 NSD2O96028 1365 aa33.77■■■■□ 3
SNX5-219ENST00000606602 KIF24Q5T7B8 1368 aa33.77■■■■□ 3
SNX5-219ENST00000606602 SYT17Q9BSW7 474 aa33.76■■■□□ 2.99
SNX5-219ENST00000606602 DOT1LQ8TEK3 1739 aa33.76■■■□□ 2.99
SNX5-219ENST00000606602 ARXQ96QS3 562 aa33.75■■■□□ 2.99
SNX5-219ENST00000606602 SHANK3Q9BYB0 1731 aa33.74■■■□□ 2.99
SNX5-219ENST00000606602 EMILIN1Q9Y6C2 1016 aa33.74■■■□□ 2.99
SNX5-219ENST00000606602 TFCP2L1Q9NZI6 479 aa33.73■■■□□ 2.99
SNX5-219ENST00000606602 PPM1GO15355 546 aaPredicted RBP33.71■■■□□ 2.99
SNX5-219ENST00000606602 CCNL1Q9UK58 526 aaPredicted RBP33.71■■■□□ 2.99
SNX5-219ENST00000606602 SLC16A10Q8TF71 515 aa33.7■■■□□ 2.99
SNX5-219ENST00000606602 POLR3GLQ9BT43 218 aa33.7■■■□□ 2.99
SNX5-219ENST00000606602 PNPLA7Q6ZV29 1317 aa33.7■■■□□ 2.99
SNX5-219ENST00000606602 PCDH11XQ9BZA7 1347 aa33.7■■■□□ 2.99
SNX5-219ENST00000606602 PCDH11YQ9BZA8 1340 aa33.7■■■□□ 2.99
SNX5-219ENST00000606602 CYP27B1O15528 508 aa33.63■■■□□ 2.97
SNX5-219ENST00000606602 POLD1P28340 1107 aa33.63■■■□□ 2.97
SNX5-219ENST00000606602 LY75O60449 1722 aa33.62■■■□□ 2.97
SNX5-219ENST00000606602 WASHC2AQ641Q2 1341 aa33.61■■■□□ 2.97
SNX5-219ENST00000606602 MAP3K5Q99683 1374 aa33.6■■■□□ 2.97
SNX5-219ENST00000606602 MPRIPQ6WCQ1 1025 aa33.6■■■□□ 2.97
SNX5-219ENST00000606602 QSER1Q2KHR3 1735 aa33.59■■■□□ 2.97
SNX5-219ENST00000606602 KLHL34Q8N239 644 aa33.59■■■□□ 2.97
SNX5-219ENST00000606602 MSH5O43196 834 aa33.58■■■□□ 2.97
SNX5-219ENST00000606602 EIF4G2P78344 907 aaKnown RBP eCLIP33.58■■■□□ 2.97
SNX5-219ENST00000606602 POLKQ9UBT6 870 aa33.57■■■□□ 2.96
SNX5-219ENST00000606602 EYA1Q99502 592 aa33.56■■■□□ 2.96
SNX5-219ENST00000606602 SPG7Q9UQ90 795 aa33.56■■■□□ 2.96
SNX5-219ENST00000606602 NCAPD2Q15021 1401 aa33.55■■■□□ 2.96
SNX5-219ENST00000606602 HSPA5P11021 654 aaKnown RBP33.55■■■□□ 2.96
SNX5-219ENST00000606602 TNNT2P45379 298 aaPredicted RBP33.55■■■□□ 2.96
SNX5-219ENST00000606602 PALLDQ8WX93 1383 aa33.55■■■□□ 2.96
SNX5-219ENST00000606602 COL23A1Q86Y22 540 aaPredicted RBP33.53■■■□□ 2.96
SNX5-219ENST00000606602 TUBGCP6Q96RT7 1819 aa33.53■■■□□ 2.96
SNX5-219ENST00000606602 CCER1Q8TC90 406 aaPredicted RBP33.52■■■□□ 2.96
SNX5-219ENST00000606602 ANKRD26Q9UPS8 1709 aa33.51■■■□□ 2.96
SNX5-219ENST00000606602 HMGB2P26583 209 aaKnown RBP33.51■■■□□ 2.95
SNX5-219ENST00000606602 SMARCC1Q92922 1105 aaPredicted RBP33.51■■■□□ 2.95
SNX5-219ENST00000606602 NKX1-1Q15270 411 aaPredicted RBP33.5■■■□□ 2.95
SNX5-219ENST00000606602 UTRNP46939 3433 aa33.5■■■□□ 2.95
SNX5-219ENST00000606602 GPR162Q16538 588 aa33.49■■■□□ 2.95
SNX5-219ENST00000606602 PIGBQ92521 554 aa33.49■■■□□ 2.95
SNX5-219ENST00000606602 PKD1L3Q7Z443 1732 aa33.48■■■□□ 2.95
SNX5-219ENST00000606602 PANK3Q9H999 370 aa33.48■■■□□ 2.95
SNX5-219ENST00000606602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.48■■■□□ 2.95
SNX5-219ENST00000606602 EIF4A2Q14240 407 aaKnown RBP33.47■■■□□ 2.95
SNX5-219ENST00000606602 COL24A1Q17RW2 1714 aa33.46■■■□□ 2.95
SNX5-219ENST00000606602 MAP2P11137 1827 aaKnown RBP33.46■■■□□ 2.95
SNX5-219ENST00000606602 TOGARAM1Q9Y4F4 1720 aa33.45■■■□□ 2.95
SNX5-219ENST00000606602 MSL1Q68DK7 614 aa33.45■■■□□ 2.95
SNX5-219ENST00000606602 FLAD1Q8NFF5 587 aa33.44■■■□□ 2.94
SNX5-219ENST00000606602 C5P01031 1676 aa33.43■■■□□ 2.94
SNX5-219ENST00000606602 PELP1Q8IZL8 1130 aaKnown RBP33.43■■■□□ 2.94
SNX5-219ENST00000606602 ZNF784Q8NCA9 323 aaPredicted RBP33.43■■■□□ 2.94
SNX5-219ENST00000606602 NLGN2Q8NFZ4 835 aa33.43■■■□□ 2.94
SNX5-219ENST00000606602 IFNL2Q8IZJ0 200 aa33.42■■■□□ 2.94
SNX5-219ENST00000606602 TMOD3Q9NYL9 352 aa33.42■■■□□ 2.94
SNX5-219ENST00000606602 PHKG2P15735 406 aa33.41■■■□□ 2.94
SNX5-219ENST00000606602 AK7Q96M32 723 aa33.41■■■□□ 2.94
SNX5-219ENST00000606602 ITGB4P16144 1822 aa33.39■■■□□ 2.94
SNX5-219ENST00000606602 LOC102724428A0A0B4J2F2 783 aa33.36■■■□□ 2.93
SNX5-219ENST00000606602 SIK1P57059 783 aa33.36■■■□□ 2.93
SNX5-219ENST00000606602 ASAP1Q9ULH1 1129 aa33.36■■■□□ 2.93
SNX5-219ENST00000606602 IGSF1Q8N6C5 1336 aa33.35■■■□□ 2.93
SNX5-219ENST00000606602 MORC1Q86VD1 984 aa33.35■■■□□ 2.93
SNX5-219ENST00000606602 C4BP0C0L5 1744 aa33.34■■■□□ 2.93
SNX5-219ENST00000606602 PHF14O94880 888 aa33.34■■■□□ 2.93
SNX5-219ENST00000606602 TAF1LQ8IZX4 1826 aa33.33■■■□□ 2.93
SNX5-219ENST00000606602 AMIGO3Q86WK7 504 aa33.33■■■□□ 2.93
SNX5-219ENST00000606602 SMIM5Q71RC9 77 aa33.32■■■□□ 2.92
SNX5-219ENST00000606602 LINC00116Q8NCU8 138 aa33.32■■■□□ 2.92
SNX5-219ENST00000606602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.31■■■□□ 2.92
SNX5-219ENST00000606602 PLEKHG2Q9H7P9 1386 aa33.31■■■□□ 2.92
SNX5-219ENST00000606602 ATG3Q9NT62 314 aa33.3■■■□□ 2.92
SNX5-219ENST00000606602 ATP6V1AP38606 617 aa33.29■■■□□ 2.92
SNX5-219ENST00000606602 KNSTRNQ9Y448 316 aa33.29■■■□□ 2.92
SNX5-219ENST00000606602 CHD4Q14839 1912 aa33.28■■■□□ 2.92
SNX5-219ENST00000606602 ITPK1Q13572 414 aa33.28■■■□□ 2.92
SNX5-219ENST00000606602 PLEKHO1Q53GL0 409 aaPredicted RBP33.28■■■□□ 2.92
SNX5-219ENST00000606602 GOLGB1Q14789 3259 aaKnown RBP33.27■■■□□ 2.92
SNX5-219ENST00000606602 SSFA2P28290 1259 aa33.27■■■□□ 2.92
SNX5-219ENST00000606602 CD2APQ9Y5K6 639 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms