RNA–Protein interactions for RNA: ENST00000604860.3

UBE3A-206, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-206ENST00000604860 SCARF1Q14162 830 aa9.08□□□□□ -0.96
UBE3A-206ENST00000604860 DEPDC4Q8N2C3 294 aa9.08□□□□□ -0.96
UBE3A-206ENST00000604860 INSM2Q96T92 566 aaPredicted RBP9.08□□□□□ -0.96
UBE3A-206ENST00000604860 SPINT1O43278 529 aa9.07□□□□□ -0.96
UBE3A-206ENST00000604860 PTGIRP43119 386 aa9.07□□□□□ -0.96
UBE3A-206ENST00000604860 CTSOP43234 321 aaPredicted RBP9.07□□□□□ -0.96
UBE3A-206ENST00000604860 SENP2Q9HC62 589 aa9.07□□□□□ -0.96
UBE3A-206ENST00000604860 UPP2O95045 317 aa9.06□□□□□ -0.96
UBE3A-206ENST00000604860 C14orf37Q86TY3 774 aa9.06□□□□□ -0.96
UBE3A-206ENST00000604860 CCDC125Q86Z20 511 aa9.06□□□□□ -0.96
UBE3A-206ENST00000604860 CALR3Q96L12 384 aaKnown RBP9.06□□□□□ -0.96
UBE3A-206ENST00000604860 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
UBE3A-206ENST00000604860 FIGNL2A6NMB9 653 aa9.05□□□□□ -0.96
UBE3A-206ENST00000604860 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
UBE3A-206ENST00000604860 RAB6BQ9NRW1 208 aa9.05□□□□□ -0.96
UBE3A-206ENST00000604860 DNMT3LQ9UJW3 386 aa9.05□□□□□ -0.96
UBE3A-206ENST00000604860 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
UBE3A-206ENST00000604860 USP17L5A8MUK1 530 aa9.04□□□□□ -0.96
UBE3A-206ENST00000604860 NCOA4Q13772 614 aa9.04□□□□□ -0.96
UBE3A-206ENST00000604860 KIFC2Q96AC6 838 aa9.04□□□□□ -0.96
UBE3A-206ENST00000604860 ARHGEF10LQ9HCE6 1279 aa9.04□□□□□ -0.96
UBE3A-206ENST00000604860 ARID3CA6NKF2 412 aa9.03□□□□□ -0.96
UBE3A-206ENST00000604860 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
UBE3A-206ENST00000604860 MAP7D1Q3KQU3 841 aa9.03□□□□□ -0.96
UBE3A-206ENST00000604860 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
UBE3A-206ENST00000604860 POLMQ9NP87 494 aaPredicted RBP9.03□□□□□ -0.96
UBE3A-206ENST00000604860 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
UBE3A-206ENST00000604860 ATP9BO43861 1147 aa9.02□□□□□ -0.97
UBE3A-206ENST00000604860 USP4Q13107 963 aa9.02□□□□□ -0.97
UBE3A-206ENST00000604860 CYP2U1Q7Z449 544 aa9.02□□□□□ -0.97
UBE3A-206ENST00000604860 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
UBE3A-206ENST00000604860 TFIP11Q9UBB9 837 aaKnown RBP9.02□□□□□ -0.97
UBE3A-206ENST00000604860 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
UBE3A-206ENST00000604860 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
UBE3A-206ENST00000604860 MEN1O00255 615 aa9.01□□□□□ -0.97
UBE3A-206ENST00000604860 IL2RAP01589 272 aa9.01□□□□□ -0.97
UBE3A-206ENST00000604860 USP17L2Q6R6M4 530 aa9.01□□□□□ -0.97
UBE3A-206ENST00000604860 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
UBE3A-206ENST00000604860 RNF217Q8TC41 542 aa9.01□□□□□ -0.97
UBE3A-206ENST00000604860 PALM3A6NDB9 673 aaPredicted RBP9□□□□□ -0.97
UBE3A-206ENST00000604860 MAN1A2O60476 641 aa9□□□□□ -0.97
UBE3A-206ENST00000604860 ZNF775Q96BV0 537 aaPredicted RBP9□□□□□ -0.97
UBE3A-206ENST00000604860 PPP1R12CQ9BZL4 782 aa9□□□□□ -0.97
UBE3A-206ENST00000604860 ESF1Q9H501 851 aaKnown RBP9□□□□□ -0.97
UBE3A-206ENST00000604860 ETNK1Q9HBU6 452 aa9□□□□□ -0.97
UBE3A-206ENST00000604860 PCDHGA11Q9Y5H2 935 aa9□□□□□ -0.97
UBE3A-206ENST00000604860 MAFBQ9Y5Q3 323 aaPredicted RBP9□□□□□ -0.97
UBE3A-206ENST00000604860 SCNN1DP51172 638 aa8.99□□□□□ -0.97
UBE3A-206ENST00000604860 EML3Q32P44 896 aa8.99□□□□□ -0.97
UBE3A-206ENST00000604860 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
UBE3A-206ENST00000604860 PLEKHM2Q8IWE5 1019 aa8.98□□□□□ -0.97
UBE3A-206ENST00000604860 C1orf115Q9H7X2 142 aa8.98□□□□□ -0.97
UBE3A-206ENST00000604860 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
UBE3A-206ENST00000604860 GNRH1P01148 92 aa8.97□□□□□ -0.97
UBE3A-206ENST00000604860 VEGFBP49765 207 aa8.97□□□□□ -0.97
UBE3A-206ENST00000604860 CLN3Q13286 438 aa8.97□□□□□ -0.97
UBE3A-206ENST00000604860 HRH3Q9Y5N1 445 aa8.97□□□□□ -0.97
UBE3A-206ENST00000604860 GTF2IP78347 998 aa8.96□□□□□ -0.98
UBE3A-206ENST00000604860 CLDN10P78369 228 aa8.96□□□□□ -0.98
UBE3A-206ENST00000604860 CFAP70Q5T0N1 1121 aa8.96□□□□□ -0.98
UBE3A-206ENST00000604860 CNKSR1Q969H4 720 aa8.96□□□□□ -0.98
UBE3A-206ENST00000604860 SIRT1Q96EB6 747 aa8.96□□□□□ -0.98
UBE3A-206ENST00000604860 NOD1Q9Y239 953 aa8.96□□□□□ -0.98
UBE3A-206ENST00000604860 TMEM229AB2RXF0 380 aa8.95□□□□□ -0.98
UBE3A-206ENST00000604860 RHOQP17081 205 aa8.95□□□□□ -0.98
UBE3A-206ENST00000604860 RNF144AP50876 292 aaPredicted RBP8.95□□□□□ -0.98
UBE3A-206ENST00000604860 PRICKLE2Q7Z3G6 844 aa8.95□□□□□ -0.98
UBE3A-206ENST00000604860 TRIM52Q96A61 297 aa8.95□□□□□ -0.98
UBE3A-206ENST00000604860 XAGE2Q96GT9 111 aa8.95□□□□□ -0.98
UBE3A-206ENST00000604860 MKRN1Q9UHC7 482 aaKnown RBP8.95□□□□□ -0.98
UBE3A-206ENST00000604860 ZBTB7BO15156 539 aaPredicted RBP8.94□□□□□ -0.98
UBE3A-206ENST00000604860 LMOD1P29536 600 aaPredicted RBP8.94□□□□□ -0.98
UBE3A-206ENST00000604860 GDF10P55107 478 aa8.94□□□□□ -0.98
UBE3A-206ENST00000604860 CENPCQ03188 943 aa8.94□□□□□ -0.98
UBE3A-206ENST00000604860 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.94□□□□□ -0.98
UBE3A-206ENST00000604860 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
UBE3A-206ENST00000604860 NLRP3Q96P20 1036 aa8.94□□□□□ -0.98
UBE3A-206ENST00000604860 ESYT1Q9BSJ8 1104 aa8.94□□□□□ -0.98
UBE3A-206ENST00000604860 LZTS3O60299 673 aaPredicted RBP8.93□□□□□ -0.98
UBE3A-206ENST00000604860 PTSQ03393 145 aa8.93□□□□□ -0.98
UBE3A-206ENST00000604860 FHDC1Q9C0D6 1143 aaPredicted RBP8.93□□□□□ -0.98
UBE3A-206ENST00000604860 GRIP2Q9C0E4 1043 aa8.93□□□□□ -0.98
UBE3A-206ENST00000604860 SERTAD1Q9UHV2 236 aa8.93□□□□□ -0.98
UBE3A-206ENST00000604860 INHAP05111 366 aa8.92□□□□□ -0.98
UBE3A-206ENST00000604860 RFX1P22670 979 aa8.92□□□□□ -0.98
UBE3A-206ENST00000604860 PSME1Q06323 249 aa8.92□□□□□ -0.98
UBE3A-206ENST00000604860 CDCA8Q53HL2 280 aa8.92□□□□□ -0.98
UBE3A-206ENST00000604860 KANK4Q5T7N3 995 aaPredicted RBP8.92□□□□□ -0.98
UBE3A-206ENST00000604860 LYSMD3Q7Z3D4 306 aa8.92□□□□□ -0.98
UBE3A-206ENST00000604860 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
UBE3A-206ENST00000604860 SENP3-EIF4A1A0A087X0R7 540 aa8.91□□□□□ -0.98
UBE3A-206ENST00000604860 POU4F2Q12837 409 aa8.91□□□□□ -0.98
UBE3A-206ENST00000604860 SLC27A3Q5K4L6 730 aa8.91□□□□□ -0.98
UBE3A-206ENST00000604860 OGFOD1Q8N543 542 aa8.91□□□□□ -0.98
UBE3A-206ENST00000604860 ZNF594Q96JF6 807 aaPredicted RBP8.91□□□□□ -0.98
UBE3A-206ENST00000604860 USP3Q9Y6I4 520 aa8.91□□□□□ -0.98
UBE3A-206ENST00000604860 TERTO14746 1132 aaKnown RBP8.9□□□□□ -0.98
UBE3A-206ENST00000604860 DKK1O94907 266 aa8.9□□□□□ -0.98
UBE3A-206ENST00000604860 GPC1P35052 558 aa8.9□□□□□ -0.98
UBE3A-206ENST00000604860 NFX1Q12986 1120 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms