RNA–Protein interactions for RNA: ENST00000604842.1

AP004372.1-201, humanhuman

BASIC

Gene AP004372.1, Length 844 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004372.1-201ENST00000604842 USP35Q9P2H5 1018 aa8.61□□□□□ -1.03
AP004372.1-201ENST00000604842 ADH1BP00325 375 aa8.6□□□□□ -1.03
AP004372.1-201ENST00000604842 ERCC3P19447 782 aa8.6□□□□□ -1.03
AP004372.1-201ENST00000604842 PSME1Q06323 249 aa8.6□□□□□ -1.03
AP004372.1-201ENST00000604842 ECM1Q16610 540 aa8.6□□□□□ -1.03
AP004372.1-201ENST00000604842 ANKRD13DQ6ZTN6 518 aa8.6□□□□□ -1.03
AP004372.1-201ENST00000604842 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.03
AP004372.1-201ENST00000604842 PCDHB11Q9Y5F2 797 aa8.59□□□□□ -1.03
AP004372.1-201ENST00000604842 DNMT3AQ9Y6K1 912 aaPredicted RBP8.59□□□□□ -1.03
AP004372.1-201ENST00000604842 ICMTO60725 284 aa8.58□□□□□ -1.04
AP004372.1-201ENST00000604842 FKBP5Q13451 457 aaPredicted RBP8.58□□□□□ -1.04
AP004372.1-201ENST00000604842 SIRT1Q96EB6 747 aa8.58□□□□□ -1.04
AP004372.1-201ENST00000604842 EGFL7Q9UHF1 273 aa8.58□□□□□ -1.04
AP004372.1-201ENST00000604842 ZPR1O75312 459 aa8.57□□□□□ -1.04
AP004372.1-201ENST00000604842 AGERQ15109 404 aa8.57□□□□□ -1.04
AP004372.1-201ENST00000604842 GLYCTKQ8IVS8 523 aa8.57□□□□□ -1.04
AP004372.1-201ENST00000604842 GTF3C2Q8WUA4 911 aaPredicted RBP8.57□□□□□ -1.04
AP004372.1-201ENST00000604842 STAC3Q96MF2 364 aa8.57□□□□□ -1.04
AP004372.1-201ENST00000604842 HINFPQ9BQA5 517 aa8.57□□□□□ -1.04
AP004372.1-201ENST00000604842 STAU1O95793 577 aaKnown RBP8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 MAPK1P28482 360 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 RAB15P59190 212 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 FBXO33Q7Z6M2 555 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 ZNF511Q8NB15 262 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 ZNF516Q92618 1163 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 SLC10A4Q96EP9 437 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 MTRQ99707 1265 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
AP004372.1-201ENST00000604842 ESPNB1AK53 854 aa8.55□□□□□ -1.04
AP004372.1-201ENST00000604842 SCTRP47872 440 aa8.55□□□□□ -1.04
AP004372.1-201ENST00000604842 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
AP004372.1-201ENST00000604842 SHROOM4Q9ULL8 1493 aa8.54□□□□□ -1.04
AP004372.1-201ENST00000604842 C21orf2O43822 256 aa8.54□□□□□ -1.04
AP004372.1-201ENST00000604842 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
AP004372.1-201ENST00000604842 THSD4Q6ZMP0 1018 aa8.54□□□□□ -1.04
AP004372.1-201ENST00000604842 BPHLQ86WA6 291 aaPredicted RBP8.54□□□□□ -1.04
AP004372.1-201ENST00000604842 C1QTNF2Q9BXJ5 285 aa8.54□□□□□ -1.04
AP004372.1-201ENST00000604842 SLC6A16Q9GZN6 736 aa8.54□□□□□ -1.04
AP004372.1-201ENST00000604842 RBM19Q9Y4C8 960 aaKnown RBP8.54□□□□□ -1.04
AP004372.1-201ENST00000604842 WEE1P30291 646 aa8.53□□□□□ -1.04
AP004372.1-201ENST00000604842 NAA30Q147X3 362 aaPredicted RBP8.53□□□□□ -1.04
AP004372.1-201ENST00000604842 S1PR4O95977 384 aa8.52□□□□□ -1.05
AP004372.1-201ENST00000604842 TCF3P15923 654 aa8.52□□□□□ -1.05
AP004372.1-201ENST00000604842 NBPF20Q3BBV1 942 aa8.52□□□□□ -1.05
AP004372.1-201ENST00000604842 NKX2-3Q8TAU0 364 aa8.52□□□□□ -1.05
AP004372.1-201ENST00000604842 ZNF358Q9NW07 568 aa8.52□□□□□ -1.05
AP004372.1-201ENST00000604842 FCF1Q9Y324 198 aaKnown RBP8.52□□□□□ -1.05
AP004372.1-201ENST00000604842 RECKO95980 971 aa8.51□□□□□ -1.05
AP004372.1-201ENST00000604842 RNF20Q5VTR2 975 aa8.51□□□□□ -1.05
AP004372.1-201ENST00000604842 ASB16Q96NS5 453 aa8.51□□□□□ -1.05
AP004372.1-201ENST00000604842 DCTN4Q9UJW0 460 aa8.51□□□□□ -1.05
AP004372.1-201ENST00000604842 SH3BP2P78314 561 aa8.5□□□□□ -1.05
AP004372.1-201ENST00000604842 USP4Q13107 963 aa8.5□□□□□ -1.05
AP004372.1-201ENST00000604842 TMEM229AB2RXF0 380 aa8.49□□□□□ -1.05
AP004372.1-201ENST00000604842 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
AP004372.1-201ENST00000604842 TJAP1Q5JTD0 557 aa8.49□□□□□ -1.05
AP004372.1-201ENST00000604842 KCTD12Q96CX2 325 aaKnown RBP8.49□□□□□ -1.05
AP004372.1-201ENST00000604842 TRMT44Q8IYL2 757 aaKnown RBP8.48□□□□□ -1.05
AP004372.1-201ENST00000604842 PPEF1O14829 653 aaPredicted RBP8.47□□□□□ -1.05
AP004372.1-201ENST00000604842 SCNN1DP51172 638 aa8.47□□□□□ -1.05
AP004372.1-201ENST00000604842 ZNF326Q5BKZ1 582 aaKnown RBP8.47□□□□□ -1.05
AP004372.1-201ENST00000604842 INTS6LQ5JSJ4 861 aaKnown RBP8.47□□□□□ -1.05
AP004372.1-201ENST00000604842 SPNS2Q8IVW8 549 aa8.47□□□□□ -1.05
AP004372.1-201ENST00000604842 TNS4Q8IZW8 715 aa8.47□□□□□ -1.05
AP004372.1-201ENST00000604842 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
AP004372.1-201ENST00000604842 M0R2N6 131 aa8.46□□□□□ -1.06
AP004372.1-201ENST00000604842 ERVH48-1M5A8F1 160 aa8.46□□□□□ -1.06
AP004372.1-201ENST00000604842 P4HBP07237 508 aaKnown RBP8.46□□□□□ -1.06
AP004372.1-201ENST00000604842 HELQQ8TDG4 1101 aa8.46□□□□□ -1.06
AP004372.1-201ENST00000604842 SAP130Q9H0E3 1048 aa8.46□□□□□ -1.06
AP004372.1-201ENST00000604842 MPSTP25325 297 aa8.45□□□□□ -1.06
AP004372.1-201ENST00000604842 SF3B2Q13435 895 aaKnown RBP8.45□□□□□ -1.06
AP004372.1-201ENST00000604842 SEPT12Q8IYM1 358 aa8.45□□□□□ -1.06
AP004372.1-201ENST00000604842 SCG3Q8WXD2 468 aaKnown RBP8.45□□□□□ -1.06
AP004372.1-201ENST00000604842 IL21Q9HBE4 155 aa8.45□□□□□ -1.06
AP004372.1-201ENST00000604842 TMPRSS4Q9NRS4 437 aa8.45□□□□□ -1.06
AP004372.1-201ENST00000604842 PTCD1O75127 700 aaKnown RBP8.44□□□□□ -1.06
AP004372.1-201ENST00000604842 MYCP01106 439 aaPredicted RBP8.44□□□□□ -1.06
AP004372.1-201ENST00000604842 VAMP1P23763 118 aa8.44□□□□□ -1.06
AP004372.1-201ENST00000604842 TBCELQ5QJ74 424 aa8.44□□□□□ -1.06
AP004372.1-201ENST00000604842 TMC7Q7Z402 723 aa8.44□□□□□ -1.06
AP004372.1-201ENST00000604842 RGL4Q8IZJ4 473 aa8.44□□□□□ -1.06
AP004372.1-201ENST00000604842 TSPAN10Q9H1Z9 355 aaPredicted RBP8.44□□□□□ -1.06
AP004372.1-201ENST00000604842 OSBPL3Q9H4L5 887 aa8.44□□□□□ -1.06
AP004372.1-201ENST00000604842 IGFBP4P22692 258 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 EPHA4P54764 986 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 GDF10P55107 478 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 SKOR1P84550 965 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 TSNAXIP1Q2TAA8 658 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 PLA2G2CQ5R387 149 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 ZSCAN29Q8IWY8 852 aaPredicted RBP8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 CYLDQ9NQC7 956 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 RNF19AQ9NV58 838 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 SERTAD1Q9UHV2 236 aa8.43□□□□□ -1.06
AP004372.1-201ENST00000604842 PTPN5P54829 565 aa8.42□□□□□ -1.06
AP004372.1-201ENST00000604842 ERVK-9P63128 1117 aa8.42□□□□□ -1.06
AP004372.1-201ENST00000604842 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
AP004372.1-201ENST00000604842 EAPPQ56P03 285 aaPredicted RBP8.42□□□□□ -1.06
AP004372.1-201ENST00000604842 CHMP7Q8WUX9 453 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms