RNA–Protein interactions for RNA: ENST00000604036.1

FOCAD-211, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-211ENST00000604036 SHANK3Q9BYB0 1731 aa32.18■■■□□ 2.74
FOCAD-211ENST00000604036 KAT6BQ8WYB5 2073 aa32.18■■■□□ 2.74
FOCAD-211ENST00000604036 PARD3Q8TEW0 1356 aa32.18■■■□□ 2.74
FOCAD-211ENST00000604036 TNS1Q9HBL0 1735 aaKnown RBP32.17■■■□□ 2.74
FOCAD-211ENST00000604036 BCL9O00512 1426 aa32.17■■■□□ 2.74
FOCAD-211ENST00000604036 DEFB132Q7Z7B7 95 aa32.16■■■□□ 2.74
FOCAD-211ENST00000604036 CFAP53Q96M91 514 aa32.16■■■□□ 2.74
FOCAD-211ENST00000604036 BAG6P46379 1132 aa32.15■■■□□ 2.74
FOCAD-211ENST00000604036 SULT6B1Q6IMI4 303 aa32.14■■■□□ 2.74
FOCAD-211ENST00000604036 APBA3O96018 575 aa32.13■■■□□ 2.73
FOCAD-211ENST00000604036 COL3A1P02461 1466 aaPredicted RBP32.13■■■□□ 2.73
FOCAD-211ENST00000604036 AEBP1Q8IUX7 1158 aa32.13■■■□□ 2.73
FOCAD-211ENST00000604036 PKD1L3Q7Z443 1732 aa32.12■■■□□ 2.73
FOCAD-211ENST00000604036 ACSBG1Q96GR2 724 aa32.12■■■□□ 2.73
FOCAD-211ENST00000604036 SPG7Q9UQ90 795 aa32.12■■■□□ 2.73
FOCAD-211ENST00000604036 PCDH11XQ9BZA7 1347 aa32.11■■■□□ 2.73
FOCAD-211ENST00000604036 PCDH11YQ9BZA8 1340 aa32.11■■■□□ 2.73
FOCAD-211ENST00000604036 RALBP1Q15311 655 aa32.11■■■□□ 2.73
FOCAD-211ENST00000604036 BCL11BQ9C0K0 894 aaPredicted RBP32.1■■■□□ 2.73
FOCAD-211ENST00000604036 PTF1AQ7RTS3 328 aa32.09■■■□□ 2.73
FOCAD-211ENST00000604036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.09■■■□□ 2.732e-13■■■■■ 29.9
FOCAD-211ENST00000604036 U2SURPO15042 1029 aaKnown RBP32.08■■■□□ 2.73
FOCAD-211ENST00000604036 EN1Q05925 392 aaPredicted RBP32.08■■■□□ 2.73
FOCAD-211ENST00000604036 CYP27B1O15528 508 aa32.07■■■□□ 2.72
FOCAD-211ENST00000604036 KCNQ2O43526 872 aa32.07■■■□□ 2.72
FOCAD-211ENST00000604036 HMOX1P09601 288 aa32.07■■■□□ 2.72
FOCAD-211ENST00000604036 KDRP35968 1356 aa32.07■■■□□ 2.72
FOCAD-211ENST00000604036 NHSQ6T4R5 1651 aa32.05■■■□□ 2.72
FOCAD-211ENST00000604036 PLEKHO1Q53GL0 409 aaPredicted RBP32.04■■■□□ 2.72
FOCAD-211ENST00000604036 PLEKHG2Q9H7P9 1386 aa32.04■■■□□ 2.72
FOCAD-211ENST00000604036 NUDCQ9Y266 331 aa32.03■■■□□ 2.72
FOCAD-211ENST00000604036 DOT1LQ8TEK3 1739 aa32.03■■■□□ 2.72
FOCAD-211ENST00000604036 EZH2Q15910 746 aaKnown RBP32.01■■■□□ 2.71
FOCAD-211ENST00000604036 SYTL4Q96C24 671 aaPredicted RBP32.01■■■□□ 2.71
FOCAD-211ENST00000604036 AMOTQ4VCS5 1084 aa32■■■□□ 2.71
FOCAD-211ENST00000604036 IFNL2Q8IZJ0 200 aa32■■■□□ 2.71
FOCAD-211ENST00000604036 PRIM1P49642 420 aaKnown RBP31.99■■■□□ 2.71
FOCAD-211ENST00000604036 CAMKK2Q96RR4 588 aa31.99■■■□□ 2.71
FOCAD-211ENST00000604036 PHKG2P15735 406 aa31.98■■■□□ 2.71
FOCAD-211ENST00000604036 BTAF1O14981 1849 aa31.98■■■□□ 2.71
FOCAD-211ENST00000604036 MYBBP1AQ9BQG0 1328 aaKnown RBP31.98■■■□□ 2.71
FOCAD-211ENST00000604036 ZNF530Q6P9A1 599 aaPredicted RBP31.97■■■□□ 2.71
FOCAD-211ENST00000604036 PRKRIP1Q9H875 184 aaPredicted RBP31.97■■■□□ 2.71
FOCAD-211ENST00000604036 NKX1-1Q15270 411 aaPredicted RBP31.96■■■□□ 2.71
FOCAD-211ENST00000604036 PLSCR1O15162 318 aa31.95■■■□□ 2.71
FOCAD-211ENST00000604036 U2AF1L5P0DN76 240 aaPredicted RBP31.94■■■□□ 2.7
FOCAD-211ENST00000604036 U2AF1Q01081 240 aaKnown RBP eCLIP31.94■■■□□ 2.7
FOCAD-211ENST00000604036 TOGARAM1Q9Y4F4 1720 aa31.92■■■□□ 2.7
FOCAD-211ENST00000604036 RGPD3A6NKT7 1758 aaPredicted RBP31.91■■■□□ 2.7
FOCAD-211ENST00000604036 RGPD4Q7Z3J3 1758 aa31.91■■■□□ 2.7
FOCAD-211ENST00000604036 C1orf141Q5JVX7 400 aa31.91■■■□□ 2.7
FOCAD-211ENST00000604036 ITGB4P16144 1822 aa31.91■■■□□ 2.7
FOCAD-211ENST00000604036 HSP90AB1P08238 724 aaKnown RBP31.89■■■□□ 2.7
FOCAD-211ENST00000604036 RREB1Q92766 1687 aa31.89■■■□□ 2.7
FOCAD-211ENST00000604036 MPRIPQ6WCQ1 1025 aa31.88■■■□□ 2.69
FOCAD-211ENST00000604036 RSPH6AQ9H0K4 717 aa31.88■■■□□ 2.69
FOCAD-211ENST00000604036 PRKAR2BP31323 418 aa31.87■■■□□ 2.69
FOCAD-211ENST00000604036 MTHFSDQ2M296 383 aaKnown RBP31.86■■■□□ 2.69
FOCAD-211ENST00000604036 DCAF5Q96JK2 942 aa31.86■■■□□ 2.69
FOCAD-211ENST00000604036 FCHSD2O94868 740 aa31.84■■■□□ 2.69
FOCAD-211ENST00000604036 AKAP4Q5JQC9 854 aa31.84■■■□□ 2.69
FOCAD-211ENST00000604036 PROM2Q8N271 834 aa31.84■■■□□ 2.69
FOCAD-211ENST00000604036 NUP188Q5SRE5 1749 aa31.83■■■□□ 2.69
FOCAD-211ENST00000604036 TXNRD1Q16881 649 aa31.83■■■□□ 2.69
FOCAD-211ENST00000604036 TMOD3Q9NYL9 352 aa31.82■■■□□ 2.68
FOCAD-211ENST00000604036 PIGBQ92521 554 aa31.81■■■□□ 2.68
FOCAD-211ENST00000604036 PHACTR3Q96KR7 559 aa31.81■■■□□ 2.68
FOCAD-211ENST00000604036 SRCAPQ6ZRS2 3230 aa31.81■■■□□ 2.68
FOCAD-211ENST00000604036 ERVV-2B6SEH9 535 aa31.8■■■□□ 2.68
FOCAD-211ENST00000604036 KDM6AO15550 1401 aaPredicted RBP31.8■■■□□ 2.68
FOCAD-211ENST00000604036 ANP32CO43423 234 aa31.79■■■□□ 2.68
FOCAD-211ENST00000604036 GAS2L2Q8NHY3 880 aa31.79■■■□□ 2.68
FOCAD-211ENST00000604036 SCN11AQ9UI33 1791 aa31.78■■■□□ 2.68
FOCAD-211ENST00000604036 VIRMAQ69YN4 1812 aaKnown RBP31.77■■■□□ 2.68
FOCAD-211ENST00000604036 CABP4P57796 275 aa31.76■■■□□ 2.67
FOCAD-211ENST00000604036 NBPF14Q5TI25 921 aa31.76■■■□□ 2.67
FOCAD-211ENST00000604036 LY75O60449 1722 aa31.75■■■□□ 2.67
FOCAD-211ENST00000604036 NEFMP07197 916 aa31.74■■■□□ 2.67
FOCAD-211ENST00000604036 LGR6Q9HBX8 967 aa31.74■■■□□ 2.67
FOCAD-211ENST00000604036 SMARCC1Q92922 1105 aaPredicted RBP31.73■■■□□ 2.67
FOCAD-211ENST00000604036 GNAT3A8MTJ3 354 aa31.72■■■□□ 2.67
FOCAD-211ENST00000604036 RNMTO43148 476 aaKnown RBP31.72■■■□□ 2.67
FOCAD-211ENST00000604036 SLC27A3Q5K4L6 730 aa31.72■■■□□ 2.67
FOCAD-211ENST00000604036 PNNQ9H307 717 aaKnown RBP31.72■■■□□ 2.67
FOCAD-211ENST00000604036 PALLDQ8WX93 1383 aa31.71■■■□□ 2.67
FOCAD-211ENST00000604036 MAP3K5Q99683 1374 aa31.71■■■□□ 2.67
FOCAD-211ENST00000604036 PSDA5PKW4 1024 aaPredicted RBP31.71■■■□□ 2.67
FOCAD-211ENST00000604036 R3HDM1Q15032 1099 aaKnown RBP31.71■■■□□ 2.67
FOCAD-211ENST00000604036 WDR43Q15061 677 aaKnown RBP eCLIP31.71■■■□□ 2.67
FOCAD-211ENST00000604036 NFATC2IPQ8NCF5 419 aa31.71■■■□□ 2.67
FOCAD-211ENST00000604036 LRRC4BQ9NT99 713 aa31.71■■■□□ 2.67
FOCAD-211ENST00000604036 KCNQ4P56696 695 aa31.7■■■□□ 2.67
FOCAD-211ENST00000604036 ASAP1Q9ULH1 1129 aa31.7■■■□□ 2.67
FOCAD-211ENST00000604036 PLEKHF1Q96S99 279 aa31.69■■■□□ 2.66
FOCAD-211ENST00000604036 CCNL1Q9UK58 526 aaPredicted RBP31.69■■■□□ 2.66
FOCAD-211ENST00000604036 ANO8Q9HCE9 1232 aaPredicted RBP31.67■■■□□ 2.66
FOCAD-211ENST00000604036 ATG3Q9NT62 314 aa31.67■■■□□ 2.66
FOCAD-211ENST00000604036 ADAMTS7Q9UKP4 1686 aa31.67■■■□□ 2.66
FOCAD-211ENST00000604036 SLC52A2Q9HAB3 445 aa31.66■■■□□ 2.66
FOCAD-211ENST00000604036 MAPK8IP3Q9UPT6 1336 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms