RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 ERBB3P21860 1342 aa28.17■■■□□ 2.1
GRAMD1A-214ENST00000603907 CNGB1Q14028 1251 aaPredicted RBP28.16■■■□□ 2.1
GRAMD1A-214ENST00000603907 CARD10Q9BWT7 1032 aa28.16■■■□□ 2.1
GRAMD1A-214ENST00000603907 PPM1GO15355 546 aaPredicted RBP28.15■■■□□ 2.1
GRAMD1A-214ENST00000603907 PROM2Q8N271 834 aa28.15■■■□□ 2.1
GRAMD1A-214ENST00000603907 STK32BQ9NY57 414 aa28.15■■■□□ 2.1
GRAMD1A-214ENST00000603907 ZBTB7AO95365 584 aa28.14■■■□□ 2.1
GRAMD1A-214ENST00000603907 ANKRD24Q8TF21 1146 aa28.14■■■□□ 2.1
GRAMD1A-214ENST00000603907 EXOC5O00471 708 aa28.13■■■□□ 2.09
GRAMD1A-214ENST00000603907 HSP90AB2PQ58FF8 381 aa28.13■■■□□ 2.09
GRAMD1A-214ENST00000603907 TXNRD1Q16881 649 aa28.12■■■□□ 2.09
GRAMD1A-214ENST00000603907 PDGFDQ9GZP0 370 aaPredicted RBP28.12■■■□□ 2.09
GRAMD1A-214ENST00000603907 MTHFSP49914 203 aa28.11■■■□□ 2.09
GRAMD1A-214ENST00000603907 PPP2R1AP30153 589 aa28.1■■■□□ 2.09
GRAMD1A-214ENST00000603907 FAM208AQ9UK61 1670 aaKnown RBP28.1■■■□□ 2.09
GRAMD1A-214ENST00000603907 ATF5Q9Y2D1 282 aaPredicted RBP28.09■■■□□ 2.09
GRAMD1A-214ENST00000603907 PTGER2P43116 358 aa28.08■■■□□ 2.09
GRAMD1A-214ENST00000603907 SLC15A2Q16348 729 aa28.08■■■□□ 2.09
GRAMD1A-214ENST00000603907 PRKRIP1Q9H875 184 aaPredicted RBP28.07■■■□□ 2.08
GRAMD1A-214ENST00000603907 TNS2Q63HR2 1409 aa28.07■■■□□ 2.08
GRAMD1A-214ENST00000603907 LTV1Q96GA3 475 aaPredicted RBP28.06■■■□□ 2.08
GRAMD1A-214ENST00000603907 NHSQ6T4R5 1651 aa28.05■■■□□ 2.08
GRAMD1A-214ENST00000603907 MTFR1LQ9H019 292 aa28.04■■■□□ 2.08
GRAMD1A-214ENST00000603907 NLRP2Q9NX02 1062 aa28.04■■■□□ 2.08
GRAMD1A-214ENST00000603907 MYBBP1AQ9BQG0 1328 aaKnown RBP28.03■■■□□ 2.08
GRAMD1A-214ENST00000603907 CFAP53Q96M91 514 aa28.03■■■□□ 2.08
GRAMD1A-214ENST00000603907 EIF4A2Q14240 407 aaKnown RBP28.02■■■□□ 2.08
GRAMD1A-214ENST00000603907 ANP32CO43423 234 aa28.01■■■□□ 2.07
GRAMD1A-214ENST00000603907 FHDC1Q9C0D6 1143 aaPredicted RBP28.01■■■□□ 2.07
GRAMD1A-214ENST00000603907 SYT17Q9BSW7 474 aa28■■■□□ 2.07
GRAMD1A-214ENST00000603907 CHD4Q14839 1912 aa27.98■■■□□ 2.07
GRAMD1A-214ENST00000603907 NBPF6Q5VWK0 638 aa27.98■■■□□ 2.07
GRAMD1A-214ENST00000603907 NBPF4Q96M43 638 aa27.98■■■□□ 2.07
GRAMD1A-214ENST00000603907 COL3A1P02461 1466 aaPredicted RBP27.97■■■□□ 2.07
GRAMD1A-214ENST00000603907 DIAPH1O60610 1272 aaKnown RBP27.97■■■□□ 2.07
GRAMD1A-214ENST00000603907 IL13P35225 146 aa27.97■■■□□ 2.07
GRAMD1A-214ENST00000603907 ZNF784Q8NCA9 323 aaPredicted RBP27.97■■■□□ 2.07
GRAMD1A-214ENST00000603907 ACSBG1Q96GR2 724 aa27.97■■■□□ 2.07
GRAMD1A-214ENST00000603907 NCAPD2Q15021 1401 aa27.96■■■□□ 2.07
GRAMD1A-214ENST00000603907 EYA1Q99502 592 aa27.95■■■□□ 2.06
GRAMD1A-214ENST00000603907 SGIP1Q9BQI5 828 aa27.95■■■□□ 2.06
GRAMD1A-214ENST00000603907 BTAF1O14981 1849 aa27.95■■■□□ 2.06
GRAMD1A-214ENST00000603907 IGSF1Q8N6C5 1336 aa27.94■■■□□ 2.06
GRAMD1A-214ENST00000603907 IL2RBP14784 551 aa27.94■■■□□ 2.06
GRAMD1A-214ENST00000603907 KAT6BQ8WYB5 2073 aa27.94■■■□□ 2.06
GRAMD1A-214ENST00000603907 PAPPAQ13219 1627 aa27.93■■■□□ 2.06
GRAMD1A-214ENST00000603907 ARXQ96QS3 562 aa27.93■■■□□ 2.06
GRAMD1A-214ENST00000603907 NUDCQ9Y266 331 aa27.92■■■□□ 2.06
GRAMD1A-214ENST00000603907 RGPD2P0DJD1 1756 aa27.91■■■□□ 2.06
GRAMD1A-214ENST00000603907 PLEKHG2Q9H7P9 1386 aa27.9■■■□□ 2.06
GRAMD1A-214ENST00000603907 MAP3K5Q99683 1374 aa27.88■■■□□ 2.05
GRAMD1A-214ENST00000603907 RAPGEF4Q8WZA2 1011 aa27.88■■■□□ 2.05
GRAMD1A-214ENST00000603907 USHBP1Q8N6Y0 703 aa27.87■■■□□ 2.05
GRAMD1A-214ENST00000603907 KDRP35968 1356 aa27.86■■■□□ 2.05
GRAMD1A-214ENST00000603907 TATP17735 454 aaPredicted RBP27.84■■■□□ 2.05
GRAMD1A-214ENST00000603907 ZNF827Q17R98 1081 aa27.84■■■□□ 2.05
GRAMD1A-214ENST00000603907 DIEXFQ68CQ4 756 aaKnown RBP27.83■■■□□ 2.05
GRAMD1A-214ENST00000603907 SULT6B1Q6IMI4 303 aa27.83■■■□□ 2.05
GRAMD1A-214ENST00000603907 QSER1Q2KHR3 1735 aa27.83■■■□□ 2.05
GRAMD1A-214ENST00000603907 U2SURPO15042 1029 aaKnown RBP27.82■■■□□ 2.04
GRAMD1A-214ENST00000603907 SLC16A10Q8TF71 515 aa27.82■■■□□ 2.04
GRAMD1A-214ENST00000603907 MEGF6O75095 1541 aa27.82■■■□□ 2.04
GRAMD1A-214ENST00000603907 LRRC4BQ9NT99 713 aa27.81■■■□□ 2.04
GRAMD1A-214ENST00000603907 GPR162Q16538 588 aa27.8■■■□□ 2.04
GRAMD1A-214ENST00000603907 SLC27A3Q5K4L6 730 aa27.8■■■□□ 2.04
GRAMD1A-214ENST00000603907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.8■■■□□ 2.04
GRAMD1A-214ENST00000603907 POLD1P28340 1107 aa27.79■■■□□ 2.04
GRAMD1A-214ENST00000603907 SENP3-EIF4A1A0A087X0R7 540 aa27.78■■■□□ 2.04
GRAMD1A-214ENST00000603907 AEBP1Q8IUX7 1158 aa27.78■■■□□ 2.04
GRAMD1A-214ENST00000603907 ZCRB1Q8TBF4 217 aaKnown RBP27.78■■■□□ 2.04
GRAMD1A-214ENST00000603907 AKT1S1Q96B36 256 aa27.78■■■□□ 2.04
GRAMD1A-214ENST00000603907 U2AF1L5P0DN76 240 aaPredicted RBP27.77■■■□□ 2.04
GRAMD1A-214ENST00000603907 C1QTNF8P60827 252 aa27.77■■■□□ 2.04
GRAMD1A-214ENST00000603907 U2AF1Q01081 240 aaKnown RBP eCLIP27.77■■■□□ 2.04
GRAMD1A-214ENST00000603907 DDX54Q8TDD1 881 aaKnown RBP27.77■■■□□ 2.04
GRAMD1A-214ENST00000603907 KLHL34Q8N239 644 aa27.76■■■□□ 2.03
GRAMD1A-214ENST00000603907 FCHSD2O94868 740 aa27.75■■■□□ 2.03
GRAMD1A-214ENST00000603907 HMOX1P09601 288 aa27.75■■■□□ 2.03
GRAMD1A-214ENST00000603907 AMOTQ4VCS5 1084 aa27.75■■■□□ 2.03
GRAMD1A-214ENST00000603907 SPG7Q9UQ90 795 aa27.75■■■□□ 2.03
GRAMD1A-214ENST00000603907 COL24A1Q17RW2 1714 aa27.75■■■□□ 2.03
GRAMD1A-214ENST00000603907 UTRNP46939 3433 aa27.73■■■□□ 2.03
GRAMD1A-214ENST00000603907 TFCP2L1Q9NZI6 479 aa27.73■■■□□ 2.03
GRAMD1A-214ENST00000603907 PKD1L3Q7Z443 1732 aa27.72■■■□□ 2.03
GRAMD1A-214ENST00000603907 PCDH11XQ9BZA7 1347 aa27.72■■■□□ 2.03
GRAMD1A-214ENST00000603907 PCDH11YQ9BZA8 1340 aa27.72■■■□□ 2.03
GRAMD1A-214ENST00000603907 PLEKHO1Q53GL0 409 aaPredicted RBP27.72■■■□□ 2.03
GRAMD1A-214ENST00000603907 SYTL4Q96C24 671 aaPredicted RBP27.72■■■□□ 2.03
GRAMD1A-214ENST00000603907 RSPH6AQ9H0K4 717 aa27.72■■■□□ 2.03
GRAMD1A-214ENST00000603907 PNNQ9H307 717 aaKnown RBP27.72■■■□□ 2.03
GRAMD1A-214ENST00000603907 TUBGCP6Q96RT7 1819 aa27.71■■■□□ 2.03
GRAMD1A-214ENST00000603907 PNPLA7Q6ZV29 1317 aa27.71■■■□□ 2.03
GRAMD1A-214ENST00000603907 WDR43Q15061 677 aaKnown RBP eCLIP27.71■■■□□ 2.03
GRAMD1A-214ENST00000603907 DOT1LQ8TEK3 1739 aa27.71■■■□□ 2.03
GRAMD1A-214ENST00000603907 PELP1Q8IZL8 1130 aaKnown RBP27.7■■■□□ 2.02
GRAMD1A-214ENST00000603907 LY75O60449 1722 aa27.7■■■□□ 2.02
GRAMD1A-214ENST00000603907 MRS2Q9HD23 443 aa27.69■■■□□ 2.02
GRAMD1A-214ENST00000603907 PRIM1P49642 420 aaKnown RBP27.68■■■□□ 2.02
GRAMD1A-214ENST00000603907 PRKAR2BP31323 418 aa27.67■■■□□ 2.02
GRAMD1A-214ENST00000603907 CCER2I3L3R5 266 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms