RNA–Protein interactions for RNA: ENST00000603439.1

AC078880.3-201, humanhuman

BASIC

Gene AC078880.3, Length 1,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.3-201ENST00000603439 TUBGCP6Q96RT7 1819 aa16.62■□□□□ 0.25
AC078880.3-201ENST00000603439 KCNQ2O43526 872 aa16.62■□□□□ 0.25
AC078880.3-201ENST00000603439 ACSBG1Q96GR2 724 aa16.62■□□□□ 0.25
AC078880.3-201ENST00000603439 QSER1Q2KHR3 1735 aa16.62■□□□□ 0.25
AC078880.3-201ENST00000603439 HSPA5P11021 654 aaKnown RBP16.61■□□□□ 0.25
AC078880.3-201ENST00000603439 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
AC078880.3-201ENST00000603439 EIF4G2P78344 907 aaKnown RBP eCLIP16.6■□□□□ 0.25
AC078880.3-201ENST00000603439 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
AC078880.3-201ENST00000603439 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
AC078880.3-201ENST00000603439 PROM2Q8N271 834 aa16.59■□□□□ 0.25
AC078880.3-201ENST00000603439 USHBP1Q8N6Y0 703 aa16.59■□□□□ 0.25
AC078880.3-201ENST00000603439 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
AC078880.3-201ENST00000603439 CGNL1Q0VF96 1302 aa16.59■□□□□ 0.25
AC078880.3-201ENST00000603439 NSD2O96028 1365 aa16.59■□□□□ 0.25
AC078880.3-201ENST00000603439 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
AC078880.3-201ENST00000603439 TXNRD1Q16881 649 aa16.58■□□□□ 0.24
AC078880.3-201ENST00000603439 HSP90AB2PQ58FF8 381 aa16.58■□□□□ 0.24
AC078880.3-201ENST00000603439 NBPF6Q5VWK0 638 aa16.58■□□□□ 0.24
AC078880.3-201ENST00000603439 NBPF4Q96M43 638 aa16.58■□□□□ 0.24
AC078880.3-201ENST00000603439 DDX54Q8TDD1 881 aaKnown RBP16.56■□□□□ 0.24
AC078880.3-201ENST00000603439 ITGB4P16144 1822 aa16.56■□□□□ 0.24
AC078880.3-201ENST00000603439 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
AC078880.3-201ENST00000603439 C5P01031 1676 aa16.55■□□□□ 0.24
AC078880.3-201ENST00000603439 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
AC078880.3-201ENST00000603439 STK32BQ9NY57 414 aa16.53■□□□□ 0.24
AC078880.3-201ENST00000603439 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
AC078880.3-201ENST00000603439 PDGFDQ9GZP0 370 aaPredicted RBP16.52■□□□□ 0.24
AC078880.3-201ENST00000603439 TAF1LQ8IZX4 1826 aa16.52■□□□□ 0.23
AC078880.3-201ENST00000603439 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
AC078880.3-201ENST00000603439 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
AC078880.3-201ENST00000603439 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
AC078880.3-201ENST00000603439 SLC15A2Q16348 729 aa16.51■□□□□ 0.23
AC078880.3-201ENST00000603439 COL24A1Q17RW2 1714 aa16.5■□□□□ 0.23
AC078880.3-201ENST00000603439 TATP17735 454 aaPredicted RBP16.5■□□□□ 0.23
AC078880.3-201ENST00000603439 SYTL4Q96C24 671 aaPredicted RBP16.5■□□□□ 0.23
AC078880.3-201ENST00000603439 SPON1Q9HCB6 807 aa16.5■□□□□ 0.23
AC078880.3-201ENST00000603439 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
AC078880.3-201ENST00000603439 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
AC078880.3-201ENST00000603439 PANK3Q9H999 370 aa16.49■□□□□ 0.23
AC078880.3-201ENST00000603439 LRRC4BQ9NT99 713 aa16.48■□□□□ 0.23
AC078880.3-201ENST00000603439 POLKQ9UBT6 870 aa16.48■□□□□ 0.23
AC078880.3-201ENST00000603439 ZBTB7AO95365 584 aa16.47■□□□□ 0.23
AC078880.3-201ENST00000603439 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
AC078880.3-201ENST00000603439 PRIM1P49642 420 aaKnown RBP16.47■□□□□ 0.23
AC078880.3-201ENST00000603439 KIF7Q2M1P5 1343 aa16.46■□□□□ 0.23
AC078880.3-201ENST00000603439 PPP1R1BQ9UD71 204 aaPredicted RBP16.46■□□□□ 0.23
AC078880.3-201ENST00000603439 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
AC078880.3-201ENST00000603439 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
AC078880.3-201ENST00000603439 CYP27B1O15528 508 aa16.44■□□□□ 0.22
AC078880.3-201ENST00000603439 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
AC078880.3-201ENST00000603439 EYA1Q99502 592 aa16.44■□□□□ 0.22
AC078880.3-201ENST00000603439 C4BP0C0L5 1744 aa16.44■□□□□ 0.22
AC078880.3-201ENST00000603439 PTGER2P43116 358 aa16.43■□□□□ 0.22
AC078880.3-201ENST00000603439 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
AC078880.3-201ENST00000603439 IGSF1Q8N6C5 1336 aa16.43■□□□□ 0.22
AC078880.3-201ENST00000603439 PALLDQ8WX93 1383 aa16.42■□□□□ 0.22
AC078880.3-201ENST00000603439 KCNQ4P56696 695 aa16.42■□□□□ 0.22
AC078880.3-201ENST00000603439 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
AC078880.3-201ENST00000603439 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
AC078880.3-201ENST00000603439 UBR3Q6ZT12 1888 aa16.42■□□□□ 0.22
AC078880.3-201ENST00000603439 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
AC078880.3-201ENST00000603439 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
AC078880.3-201ENST00000603439 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
AC078880.3-201ENST00000603439 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
AC078880.3-201ENST00000603439 SGIP1Q9BQI5 828 aa16.4■□□□□ 0.22
AC078880.3-201ENST00000603439 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
AC078880.3-201ENST00000603439 MORC1Q86VD1 984 aa16.39■□□□□ 0.21
AC078880.3-201ENST00000603439 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
AC078880.3-201ENST00000603439 KNSTRNQ9Y448 316 aa16.39■□□□□ 0.21
AC078880.3-201ENST00000603439 AMER1Q5JTC6 1135 aaPredicted RBP16.38■□□□□ 0.21
AC078880.3-201ENST00000603439 COL5A3P25940 1745 aaPredicted RBP16.38■□□□□ 0.21
AC078880.3-201ENST00000603439 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
AC078880.3-201ENST00000603439 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
AC078880.3-201ENST00000603439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.21
AC078880.3-201ENST00000603439 ZNF831Q5JPB2 1677 aa16.37■□□□□ 0.21
AC078880.3-201ENST00000603439 SCN11AQ9UI33 1791 aa16.36■□□□□ 0.21
AC078880.3-201ENST00000603439 PHKG2P15735 406 aa16.36■□□□□ 0.21
AC078880.3-201ENST00000603439 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
AC078880.3-201ENST00000603439 TFCP2L1Q9NZI6 479 aa16.35■□□□□ 0.21
AC078880.3-201ENST00000603439 KDRP35968 1356 aa16.35■□□□□ 0.21
AC078880.3-201ENST00000603439 MAP3K5Q99683 1374 aa16.35■□□□□ 0.21
AC078880.3-201ENST00000603439 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
AC078880.3-201ENST00000603439 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
AC078880.3-201ENST00000603439 AEBP1Q8IUX7 1158 aa16.34■□□□□ 0.21
AC078880.3-201ENST00000603439 FHDC1Q9C0D6 1143 aaPredicted RBP16.34■□□□□ 0.21
AC078880.3-201ENST00000603439 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
AC078880.3-201ENST00000603439 PIGBQ92521 554 aa16.33■□□□□ 0.2
AC078880.3-201ENST00000603439 TJP1Q07157 1748 aa16.32■□□□□ 0.2
AC078880.3-201ENST00000603439 SLC16A10Q8TF71 515 aa16.32■□□□□ 0.2
AC078880.3-201ENST00000603439 TMOD3Q9NYL9 352 aa16.32■□□□□ 0.2
AC078880.3-201ENST00000603439 ADAMTS7Q9UKP4 1686 aa16.31■□□□□ 0.2
AC078880.3-201ENST00000603439 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
AC078880.3-201ENST00000603439 ARXQ96QS3 562 aa16.31■□□□□ 0.2
AC078880.3-201ENST00000603439 C4AP0C0L4 1744 aa16.31■□□□□ 0.2
AC078880.3-201ENST00000603439 MRC1P22897 1456 aa16.3■□□□□ 0.2
AC078880.3-201ENST00000603439 UTRNP46939 3433 aa16.29■□□□□ 0.2
AC078880.3-201ENST00000603439 NPC1L1Q9UHC9 1359 aa16.29■□□□□ 0.2
AC078880.3-201ENST00000603439 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
AC078880.3-201ENST00000603439 IL13P35225 146 aa16.29■□□□□ 0.2
AC078880.3-201ENST00000603439 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms