RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 PARD3Q8TEW0 1356 aa27.09■■□□□ 1.93
SSBP4-210ENST00000601444 BCL9O00512 1426 aa27.09■■□□□ 1.93
SSBP4-210ENST00000601444 DIAPH1O60610 1272 aaKnown RBP27.09■■□□□ 1.93
SSBP4-210ENST00000601444 ACSBG1Q96GR2 724 aa27.09■■□□□ 1.93
SSBP4-210ENST00000601444 COL3A1P02461 1466 aaPredicted RBP27.08■■□□□ 1.93
SSBP4-210ENST00000601444 SHANK3Q9BYB0 1731 aa27.08■■□□□ 1.93
SSBP4-210ENST00000601444 SULT6B1Q6IMI4 303 aa27.08■■□□□ 1.93
SSBP4-210ENST00000601444 RGPD1P0DJD0 1748 aa27.07■■□□□ 1.92
SSBP4-210ENST00000601444 TNS1Q9HBL0 1735 aaKnown RBP27.07■■□□□ 1.92
SSBP4-210ENST00000601444 KCNQ2O43526 872 aa27.07■■□□□ 1.92
SSBP4-210ENST00000601444 APBA3O96018 575 aa27.07■■□□□ 1.92
SSBP4-210ENST00000601444 EN1Q05925 392 aaPredicted RBP27.07■■□□□ 1.92
SSBP4-210ENST00000601444 BAG6P46379 1132 aa27.05■■□□□ 1.92
SSBP4-210ENST00000601444 SBF2Q86WG5 1849 aa27.04■■□□□ 1.92
SSBP4-210ENST00000601444 CYP27B1O15528 508 aa27.04■■□□□ 1.92
SSBP4-210ENST00000601444 BCL11BQ9C0K0 894 aaPredicted RBP27.04■■□□□ 1.92
SSBP4-210ENST00000601444 HMOX1P09601 288 aa27.03■■□□□ 1.92
SSBP4-210ENST00000601444 PCDH11XQ9BZA7 1347 aa27.02■■□□□ 1.92
SSBP4-210ENST00000601444 PCDH11YQ9BZA8 1340 aa27.02■■□□□ 1.92
SSBP4-210ENST00000601444 SPG7Q9UQ90 795 aa27.02■■□□□ 1.92
SSBP4-210ENST00000601444 KDRP35968 1356 aa27.01■■□□□ 1.91
SSBP4-210ENST00000601444 U2SURPO15042 1029 aaKnown RBP27.01■■□□□ 1.91
SSBP4-210ENST00000601444 EZH2Q15910 746 aaKnown RBP27.01■■□□□ 1.91
SSBP4-210ENST00000601444 CFAP53Q96M91 514 aa27.01■■□□□ 1.91
SSBP4-210ENST00000601444 PKD1L3Q7Z443 1732 aa27.01■■□□□ 1.91
SSBP4-210ENST00000601444 RALBP1Q15311 655 aa27■■□□□ 1.91
SSBP4-210ENST00000601444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27■■□□□ 1.913e-6■■□□□ 13.5
SSBP4-210ENST00000601444 CAMKK2Q96RR4 588 aa26.99■■□□□ 1.91
SSBP4-210ENST00000601444 PRIM1P49642 420 aaKnown RBP26.97■■□□□ 1.91
SSBP4-210ENST00000601444 PLEKHO1Q53GL0 409 aaPredicted RBP26.96■■□□□ 1.91
SSBP4-210ENST00000601444 SYTL4Q96C24 671 aaPredicted RBP26.96■■□□□ 1.91
SSBP4-210ENST00000601444 NHSQ6T4R5 1651 aa26.95■■□□□ 1.91
SSBP4-210ENST00000601444 PHKG2P15735 406 aa26.95■■□□□ 1.9
SSBP4-210ENST00000601444 NKX1-1Q15270 411 aaPredicted RBP26.93■■□□□ 1.9
SSBP4-210ENST00000601444 IFNL2Q8IZJ0 200 aa26.93■■□□□ 1.9
SSBP4-210ENST00000601444 DOT1LQ8TEK3 1739 aa26.93■■□□□ 1.9
SSBP4-210ENST00000601444 PLSCR1O15162 318 aa26.92■■□□□ 1.9
SSBP4-210ENST00000601444 AMOTQ4VCS5 1084 aa26.92■■□□□ 1.9
SSBP4-210ENST00000601444 PRKRIP1Q9H875 184 aaPredicted RBP26.92■■□□□ 1.9
SSBP4-210ENST00000601444 ZNF530Q6P9A1 599 aaPredicted RBP26.91■■□□□ 1.9
SSBP4-210ENST00000601444 NUDCQ9Y266 331 aa26.91■■□□□ 1.9
SSBP4-210ENST00000601444 PLEKHG2Q9H7P9 1386 aa26.91■■□□□ 1.9
SSBP4-210ENST00000601444 PROM2Q8N271 834 aa26.9■■□□□ 1.9
SSBP4-210ENST00000601444 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
SSBP4-210ENST00000601444 U2AF1L5P0DN76 240 aaPredicted RBP26.89■■□□□ 1.9
SSBP4-210ENST00000601444 U2AF1Q01081 240 aaKnown RBP eCLIP26.89■■□□□ 1.9
SSBP4-210ENST00000601444 TOGARAM1Q9Y4F4 1720 aa26.87■■□□□ 1.89
SSBP4-210ENST00000601444 MTHFSDQ2M296 383 aaKnown RBP26.87■■□□□ 1.89
SSBP4-210ENST00000601444 RSPH6AQ9H0K4 717 aa26.87■■□□□ 1.89
SSBP4-210ENST00000601444 BTAF1O14981 1849 aa26.87■■□□□ 1.89
SSBP4-210ENST00000601444 MPRIPQ6WCQ1 1025 aa26.86■■□□□ 1.89
SSBP4-210ENST00000601444 KAT6BQ8WYB5 2073 aa26.85■■□□□ 1.89
SSBP4-210ENST00000601444 PRKAR2BP31323 418 aa26.84■■□□□ 1.89
SSBP4-210ENST00000601444 C1orf141Q5JVX7 400 aa26.84■■□□□ 1.89
SSBP4-210ENST00000601444 PHACTR3Q96KR7 559 aa26.84■■□□□ 1.89
SSBP4-210ENST00000601444 TXNRD1Q16881 649 aa26.83■■□□□ 1.89
SSBP4-210ENST00000601444 RREB1Q92766 1687 aa26.82■■□□□ 1.88
SSBP4-210ENST00000601444 PIGBQ92521 554 aa26.82■■□□□ 1.88
SSBP4-210ENST00000601444 DCAF5Q96JK2 942 aa26.82■■□□□ 1.88
SSBP4-210ENST00000601444 KDM6AO15550 1401 aaPredicted RBP26.82■■□□□ 1.88
SSBP4-210ENST00000601444 RGPD3A6NKT7 1758 aaPredicted RBP26.8■■□□□ 1.88
SSBP4-210ENST00000601444 RGPD4Q7Z3J3 1758 aa26.8■■□□□ 1.88
SSBP4-210ENST00000601444 FCHSD2O94868 740 aa26.8■■□□□ 1.88
SSBP4-210ENST00000601444 HSP90AB1P08238 724 aaKnown RBP26.8■■□□□ 1.88
SSBP4-210ENST00000601444 AKAP4Q5JQC9 854 aa26.8■■□□□ 1.88
SSBP4-210ENST00000601444 NUP188Q5SRE5 1749 aa26.79■■□□□ 1.88
SSBP4-210ENST00000601444 KCNQ4P56696 695 aa26.78■■□□□ 1.88
SSBP4-210ENST00000601444 LGR6Q9HBX8 967 aa26.78■■□□□ 1.88
SSBP4-210ENST00000601444 TMOD3Q9NYL9 352 aa26.78■■□□□ 1.88
SSBP4-210ENST00000601444 ITGB4P16144 1822 aa26.78■■□□□ 1.88
SSBP4-210ENST00000601444 LRRC4BQ9NT99 713 aa26.77■■□□□ 1.88
SSBP4-210ENST00000601444 PSDA5PKW4 1024 aaPredicted RBP26.76■■□□□ 1.87
SSBP4-210ENST00000601444 ERVV-2B6SEH9 535 aa26.76■■□□□ 1.87
SSBP4-210ENST00000601444 R3HDM1Q15032 1099 aaKnown RBP26.75■■□□□ 1.87
SSBP4-210ENST00000601444 CABP4P57796 275 aa26.74■■□□□ 1.87
SSBP4-210ENST00000601444 ANO8Q9HCE9 1232 aaPredicted RBP26.74■■□□□ 1.87
SSBP4-210ENST00000601444 ASAP1Q9ULH1 1129 aa26.74■■□□□ 1.87
SSBP4-210ENST00000601444 RNMTO43148 476 aaKnown RBP26.73■■□□□ 1.87
SSBP4-210ENST00000601444 GAS2L2Q8NHY3 880 aa26.73■■□□□ 1.87
SSBP4-210ENST00000601444 CCDC184Q52MB2 194 aa26.72■■□□□ 1.87
SSBP4-210ENST00000601444 NFATC2IPQ8NCF5 419 aa26.72■■□□□ 1.87
SSBP4-210ENST00000601444 PLEKHF1Q96S99 279 aa26.72■■□□□ 1.87
SSBP4-210ENST00000601444 PALLDQ8WX93 1383 aa26.71■■□□□ 1.87
SSBP4-210ENST00000601444 ANP32CO43423 234 aa26.71■■□□□ 1.87
SSBP4-210ENST00000601444 NBPF14Q5TI25 921 aa26.71■■□□□ 1.87
SSBP4-210ENST00000601444 ATG3Q9NT62 314 aa26.71■■□□□ 1.87
SSBP4-210ENST00000601444 MAP3K5Q99683 1374 aa26.7■■□□□ 1.86
SSBP4-210ENST00000601444 GNAT3A8MTJ3 354 aa26.69■■□□□ 1.86
SSBP4-210ENST00000601444 LY75O60449 1722 aa26.69■■□□□ 1.86
SSBP4-210ENST00000601444 SLC27A3Q5K4L6 730 aa26.69■■□□□ 1.86
SSBP4-210ENST00000601444 IL17REQ8NFR9 667 aa26.69■■□□□ 1.86
SSBP4-210ENST00000601444 CCNL1Q9UK58 526 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-210ENST00000601444 SMARCC1Q92922 1105 aaPredicted RBP26.68■■□□□ 1.86
SSBP4-210ENST00000601444 SCN11AQ9UI33 1791 aa26.68■■□□□ 1.86
SSBP4-210ENST00000601444 SLC52A2Q9HAB3 445 aa26.67■■□□□ 1.86
SSBP4-210ENST00000601444 ADAMTS8Q9UP79 889 aa26.66■■□□□ 1.86
SSBP4-210ENST00000601444 WDR43Q15061 677 aaKnown RBP eCLIP26.65■■□□□ 1.86
SSBP4-210ENST00000601444 ZNF827Q17R98 1081 aa26.65■■□□□ 1.86
SSBP4-210ENST00000601444 ADAMTS7Q9UKP4 1686 aa26.64■■□□□ 1.86
SSBP4-210ENST00000601444 PAPPAQ13219 1627 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms