RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PHF23Q9BUL5 403 aaPredicted RBP27.07■■□□□ 1.92
PNKP-215ENST00000600910 OVOS2A0A0G2JMS6 1433 aa27.06■■□□□ 1.92
PNKP-215ENST00000600910 RGS17Q9UGC6 210 aaPredicted RBP27.05■■□□□ 1.92
PNKP-215ENST00000600910 SENP3-EIF4A1A0A087X0R7 540 aa27.05■■□□□ 1.92
PNKP-215ENST00000600910 APAF1O14727 1248 aa27.05■■□□□ 1.92
PNKP-215ENST00000600910 FAM98CQ17RN3 349 aaKnown RBP27.05■■□□□ 1.92
PNKP-215ENST00000600910 PLEKHG2Q9H7P9 1386 aa27.04■■□□□ 1.92
PNKP-215ENST00000600910 MTHFSDQ2M296 383 aaKnown RBP27.03■■□□□ 1.92
PNKP-215ENST00000600910 PLEKHO1Q53GL0 409 aaPredicted RBP27.03■■□□□ 1.92
PNKP-215ENST00000600910 CDCA7Q9BWT1 371 aaPredicted RBP27.03■■□□□ 1.92
PNKP-215ENST00000600910 AMOTQ4VCS5 1084 aa27.02■■□□□ 1.92
PNKP-215ENST00000600910 PKD1L3Q7Z443 1732 aa27.01■■□□□ 1.91
PNKP-215ENST00000600910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.01■■□□□ 1.91
PNKP-215ENST00000600910 RRP7AQ9Y3A4 280 aaKnown RBP27.01■■□□□ 1.91
PNKP-215ENST00000600910 TMPOP42166 694 aaKnown RBP27■■□□□ 1.91
PNKP-215ENST00000600910 GAS2L2Q8NHY3 880 aa27■■□□□ 1.91
PNKP-215ENST00000600910 ZCRB1Q8TBF4 217 aaKnown RBP27■■□□□ 1.91
PNKP-215ENST00000600910 SPG7Q9UQ90 795 aa27■■□□□ 1.91
PNKP-215ENST00000600910 NEUROD2Q15784 382 aa26.99■■□□□ 1.91
PNKP-215ENST00000600910 NFE2L2Q16236 605 aa26.99■■□□□ 1.91
PNKP-215ENST00000600910 RBM6P78332 1123 aaKnown RBP26.98■■□□□ 1.91
PNKP-215ENST00000600910 HNRNPUQ00839 825 aaKnown RBP eCLIP26.98■■□□□ 1.91
PNKP-215ENST00000600910 THSD7AQ9UPZ6 1657 aa26.97■■□□□ 1.91
PNKP-215ENST00000600910 LRRC37A3O60309 1634 aa26.97■■□□□ 1.91
PNKP-215ENST00000600910 A0A0G2JS52 829 aa26.97■■□□□ 1.91
PNKP-215ENST00000600910 MYT1Q01538 1121 aa26.97■■□□□ 1.91
PNKP-215ENST00000600910 ZNF530Q6P9A1 599 aaPredicted RBP26.97■■□□□ 1.91
PNKP-215ENST00000600910 EXOC5O00471 708 aa26.96■■□□□ 1.91
PNKP-215ENST00000600910 RIPK4P57078 832 aa26.96■■□□□ 1.91
PNKP-215ENST00000600910 YTHDC1Q96MU7 727 aaKnown RBP26.96■■□□□ 1.91
PNKP-215ENST00000600910 SALL2Q9Y467 1007 aaPredicted RBP26.96■■□□□ 1.91
PNKP-215ENST00000600910 TNS2Q63HR2 1409 aa26.96■■□□□ 1.91
PNKP-215ENST00000600910 SHANK3Q9BYB0 1731 aa26.96■■□□□ 1.91
PNKP-215ENST00000600910 ONECUT3O60422 494 aaPredicted RBP26.95■■□□□ 1.91
PNKP-215ENST00000600910 DDB1Q16531 1140 aa26.95■■□□□ 1.91
PNKP-215ENST00000600910 POTEAQ6S8J7 498 aa26.95■■□□□ 1.91
PNKP-215ENST00000600910 PCDH11XQ9BZA7 1347 aa26.95■■□□□ 1.9
PNKP-215ENST00000600910 PCDH11YQ9BZA8 1340 aa26.95■■□□□ 1.9
PNKP-215ENST00000600910 DLG5Q8TDM6 1919 aa26.94■■□□□ 1.9
PNKP-215ENST00000600910 CYP27B1O15528 508 aa26.93■■□□□ 1.9
PNKP-215ENST00000600910 RXRBP28702 533 aa26.93■■□□□ 1.9
PNKP-215ENST00000600910 C1orf141Q5JVX7 400 aa26.93■■□□□ 1.9
PNKP-215ENST00000600910 AKAP4Q5JQC9 854 aa26.92■■□□□ 1.9
PNKP-215ENST00000600910 DDX54Q8TDD1 881 aaKnown RBP26.92■■□□□ 1.9
PNKP-215ENST00000600910 PHKG2P15735 406 aa26.91■■□□□ 1.9
PNKP-215ENST00000600910 IFNL2Q8IZJ0 200 aa26.91■■□□□ 1.9
PNKP-215ENST00000600910 MAP3K5Q99683 1374 aa26.91■■□□□ 1.9
PNKP-215ENST00000600910 GNAT3A8MTJ3 354 aa26.9■■□□□ 1.9
PNKP-215ENST00000600910 SEPT12Q8IYM1 358 aa26.9■■□□□ 1.9
PNKP-215ENST00000600910 TRIM35Q9UPQ4 493 aa26.9■■□□□ 1.9
PNKP-215ENST00000600910 NGEFQ8N5V2 710 aa26.89■■□□□ 1.9
PNKP-215ENST00000600910 NCBP3Q53F19 620 aaKnown RBP26.88■■□□□ 1.89
PNKP-215ENST00000600910 LMOD3Q0VAK6 560 aa26.87■■□□□ 1.89
PNKP-215ENST00000600910 CCDC27Q2M243 656 aa26.87■■□□□ 1.89
PNKP-215ENST00000600910 RTF1Q92541 710 aaKnown RBP26.87■■□□□ 1.89
PNKP-215ENST00000600910 HTATSF1O43719 755 aaKnown RBP26.86■■□□□ 1.89
PNKP-215ENST00000600910 DCTN1Q14203 1278 aa26.86■■□□□ 1.89
PNKP-215ENST00000600910 MPRIPQ6WCQ1 1025 aa26.86■■□□□ 1.89
PNKP-215ENST00000600910 PDE3BQ13370 1112 aa26.85■■□□□ 1.89
PNKP-215ENST00000600910 MCM10Q7L590 875 aa26.85■■□□□ 1.89
PNKP-215ENST00000600910 WWC1Q8IX03 1113 aa26.85■■□□□ 1.89
PNKP-215ENST00000600910 MARCH10Q8NA82 808 aaPredicted RBP26.85■■□□□ 1.89
PNKP-215ENST00000600910 HSP90AB1P08238 724 aaKnown RBP26.83■■□□□ 1.89
PNKP-215ENST00000600910 NKX1-1Q15270 411 aaPredicted RBP26.83■■□□□ 1.88
PNKP-215ENST00000600910 IL17REQ8NFR9 667 aa26.83■■□□□ 1.88
PNKP-215ENST00000600910 THUMPD2Q9BTF0 503 aaKnown RBP26.83■■□□□ 1.88
PNKP-215ENST00000600910 LGR6Q9HBX8 967 aa26.83■■□□□ 1.88
PNKP-215ENST00000600910 KDM6AO15550 1401 aaPredicted RBP26.82■■□□□ 1.88
PNKP-215ENST00000600910 DCAF5Q96JK2 942 aa26.82■■□□□ 1.88
PNKP-215ENST00000600910 ZBED9Q6R2W3 1325 aa26.82■■□□□ 1.88
PNKP-215ENST00000600910 RGS12O14924 1447 aa26.82■■□□□ 1.88
PNKP-215ENST00000600910 RNMTO43148 476 aaKnown RBP26.81■■□□□ 1.88
PNKP-215ENST00000600910 ZNF521Q96K83 1311 aa26.81■■□□□ 1.88
PNKP-215ENST00000600910 VIRMAQ69YN4 1812 aaKnown RBP26.8■■□□□ 1.88
PNKP-215ENST00000600910 BRWD3Q6RI45 1802 aa26.8■■□□□ 1.88
PNKP-215ENST00000600910 ADAMTS7Q9UKP4 1686 aa26.8■■□□□ 1.88
PNKP-215ENST00000600910 CEMIPQ8WUJ3 1361 aa26.8■■□□□ 1.88
PNKP-215ENST00000600910 SCN11AQ9UI33 1791 aa26.79■■□□□ 1.88
PNKP-215ENST00000600910 KRT27Q7Z3Y8 459 aa26.77■■□□□ 1.88
PNKP-215ENST00000600910 FAM182BQ5T319 152 aa26.76■■□□□ 1.87
PNKP-215ENST00000600910 TOGARAM1Q9Y4F4 1720 aa26.76■■□□□ 1.87
PNKP-215ENST00000600910 WDR63Q8IWG1 891 aa26.76■■□□□ 1.87
PNKP-215ENST00000600910 CALD1Q05682 793 aaKnown RBP26.73■■□□□ 1.87
PNKP-215ENST00000600910 TEFQ10587 303 aa26.73■■□□□ 1.87
PNKP-215ENST00000600910 DOT1LQ8TEK3 1739 aa26.73■■□□□ 1.87
PNKP-215ENST00000600910 ERVV-2B6SEH9 535 aa26.72■■□□□ 1.87
PNKP-215ENST00000600910 GOLGA2Q08379 1002 aa26.72■■□□□ 1.87
PNKP-215ENST00000600910 SLC52A2Q9HAB3 445 aa26.72■■□□□ 1.87
PNKP-215ENST00000600910 MRC1P22897 1456 aa26.72■■□□□ 1.87
PNKP-215ENST00000600910 CABP4P57796 275 aa26.71■■□□□ 1.87
PNKP-215ENST00000600910 NFATC2IPQ8NCF5 419 aa26.7■■□□□ 1.86
PNKP-215ENST00000600910 SPINK5Q9NQ38 1064 aaPredicted RBP26.7■■□□□ 1.86
PNKP-215ENST00000600910 LAS1LQ9Y4W2 734 aaKnown RBP26.7■■□□□ 1.86
PNKP-215ENST00000600910 BCL9O00512 1426 aa26.7■■□□□ 1.86
PNKP-215ENST00000600910 IL16Q14005 1332 aa26.7■■□□□ 1.86
PNKP-215ENST00000600910 CDCA7LQ96GN5 454 aa26.69■■□□□ 1.86
PNKP-215ENST00000600910 ACSBG1Q96GR2 724 aa26.69■■□□□ 1.86
PNKP-215ENST00000600910 SIPA1L3O60292 1781 aaPredicted RBP26.69■■□□□ 1.86
PNKP-215ENST00000600910 TAF7Q15545 349 aaPredicted RBP26.68■■□□□ 1.86
PNKP-215ENST00000600910 SYTL4Q96C24 671 aaPredicted RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms