RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 NPC1L1Q9UHC9 1359 aa31.63■■■□□ 2.65
SLC27A1-209ENST00000600297 PLSCR1O15162 318 aa31.61■■■□□ 2.65
SLC27A1-209ENST00000600297 PTF1AQ7RTS3 328 aa31.61■■■□□ 2.65
SLC27A1-209ENST00000600297 NBPF6Q5VWK0 638 aa31.59■■■□□ 2.65
SLC27A1-209ENST00000600297 NBPF4Q96M43 638 aa31.59■■■□□ 2.65
SLC27A1-209ENST00000600297 BTAF1O14981 1849 aa31.58■■■□□ 2.65
SLC27A1-209ENST00000600297 ACSBG1Q96GR2 724 aa31.54■■■□□ 2.64
SLC27A1-209ENST00000600297 CC2D1BQ5T0F9 858 aaKnown RBP31.53■■■□□ 2.64
SLC27A1-209ENST00000600297 SHANK3Q9BYB0 1731 aa31.52■■■□□ 2.64
SLC27A1-209ENST00000600297 KCNQ2O43526 872 aa31.51■■■□□ 2.63
SLC27A1-209ENST00000600297 RAPGEF4Q8WZA2 1011 aa31.5■■■□□ 2.63
SLC27A1-209ENST00000600297 NCAPD2Q15021 1401 aa31.49■■■□□ 2.63
SLC27A1-209ENST00000600297 DOT1LQ8TEK3 1739 aa31.49■■■□□ 2.63
SLC27A1-209ENST00000600297 USHBP1Q8N6Y0 703 aa31.48■■■□□ 2.63
SLC27A1-209ENST00000600297 DDX54Q8TDD1 881 aaKnown RBP31.48■■■□□ 2.63
SLC27A1-209ENST00000600297 EIF4A2Q14240 407 aaKnown RBP31.47■■■□□ 2.63
SLC27A1-209ENST00000600297 TXNRD1Q16881 649 aa31.47■■■□□ 2.63
SLC27A1-209ENST00000600297 MEGF6O75095 1541 aa31.47■■■□□ 2.63
SLC27A1-209ENST00000600297 TATP17735 454 aaPredicted RBP31.46■■■□□ 2.63
SLC27A1-209ENST00000600297 EYA1Q99502 592 aa31.46■■■□□ 2.63
SLC27A1-209ENST00000600297 ANO8Q9HCE9 1232 aaPredicted RBP31.46■■■□□ 2.63
SLC27A1-209ENST00000600297 CASZ1Q86V15 1759 aa31.45■■■□□ 2.63
SLC27A1-209ENST00000600297 PROM2Q8N271 834 aa31.45■■■□□ 2.63
SLC27A1-209ENST00000600297 ZCRB1Q8TBF4 217 aaKnown RBP31.45■■■□□ 2.63
SLC27A1-209ENST00000600297 MTHFSP49914 203 aa31.42■■■□□ 2.62
SLC27A1-209ENST00000600297 STK32BQ9NY57 414 aa31.4■■■□□ 2.62
SLC27A1-209ENST00000600297 SPON1Q9HCB6 807 aa31.39■■■□□ 2.62
SLC27A1-209ENST00000600297 IGSF1Q8N6C5 1336 aa31.39■■■□□ 2.62
SLC27A1-209ENST00000600297 PLEKHG2Q9H7P9 1386 aa31.39■■■□□ 2.62
SLC27A1-209ENST00000600297 PKD1L3Q7Z443 1732 aa31.36■■■□□ 2.61
SLC27A1-209ENST00000600297 PAPPAQ13219 1627 aa31.35■■■□□ 2.61
SLC27A1-209ENST00000600297 CNGB1Q14028 1251 aaPredicted RBP31.35■■■□□ 2.61
SLC27A1-209ENST00000600297 SYTL4Q96C24 671 aaPredicted RBP31.35■■■□□ 2.61
SLC27A1-209ENST00000600297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.35■■■□□ 2.61
SLC27A1-209ENST00000600297 PCDH11XQ9BZA7 1347 aa31.34■■■□□ 2.61
SLC27A1-209ENST00000600297 PCDH11YQ9BZA8 1340 aa31.34■■■□□ 2.61
SLC27A1-209ENST00000600297 IL13P35225 146 aa31.34■■■□□ 2.61
SLC27A1-209ENST00000600297 PPP1R1BQ9UD71 204 aaPredicted RBP31.34■■■□□ 2.61
SLC27A1-209ENST00000600297 SLC15A2Q16348 729 aa31.33■■■□□ 2.61
SLC27A1-209ENST00000600297 SPG7Q9UQ90 795 aa31.32■■■□□ 2.6
SLC27A1-209ENST00000600297 LY75O60449 1722 aa31.32■■■□□ 2.6
SLC27A1-209ENST00000600297 DIAPH1O60610 1272 aaKnown RBP31.29■■■□□ 2.6
SLC27A1-209ENST00000600297 PRIM1P49642 420 aaKnown RBP31.29■■■□□ 2.6
SLC27A1-209ENST00000600297 DDX10Q13206 875 aaKnown RBP31.27■■■□□ 2.6
SLC27A1-209ENST00000600297 PDGFDQ9GZP0 370 aaPredicted RBP31.27■■■□□ 2.6
SLC27A1-209ENST00000600297 KDRP35968 1356 aa31.27■■■□□ 2.6
SLC27A1-209ENST00000600297 QSER1Q2KHR3 1735 aa31.27■■■□□ 2.6
SLC27A1-209ENST00000600297 ITGB4P16144 1822 aa31.26■■■□□ 2.6
SLC27A1-209ENST00000600297 CYP27B1O15528 508 aa31.25■■■□□ 2.59
SLC27A1-209ENST00000600297 ZBTB7AO95365 584 aa31.25■■■□□ 2.59
SLC27A1-209ENST00000600297 PPP2R1AP30153 589 aa31.24■■■□□ 2.59
SLC27A1-209ENST00000600297 SULT6B1Q6IMI4 303 aa31.24■■■□□ 2.59
SLC27A1-209ENST00000600297 CFAP53Q96M91 514 aa31.24■■■□□ 2.59
SLC27A1-209ENST00000600297 TUBGCP6Q96RT7 1819 aa31.24■■■□□ 2.59
SLC27A1-209ENST00000600297 SLC27A3Q5K4L6 730 aa31.23■■■□□ 2.59
SLC27A1-209ENST00000600297 COL3A1P02461 1466 aaPredicted RBP31.22■■■□□ 2.59
SLC27A1-209ENST00000600297 NKX1-1Q15270 411 aaPredicted RBP31.22■■■□□ 2.59
SLC27A1-209ENST00000600297 AMOTQ4VCS5 1084 aa31.22■■■□□ 2.59
SLC27A1-209ENST00000600297 LRRC4BQ9NT99 713 aa31.22■■■□□ 2.59
SLC27A1-209ENST00000600297 TOGARAM1Q9Y4F4 1720 aa31.21■■■□□ 2.59
SLC27A1-209ENST00000600297 PLEKHO1Q53GL0 409 aaPredicted RBP31.21■■■□□ 2.59
SLC27A1-209ENST00000600297 IFNL2Q8IZJ0 200 aa31.21■■■□□ 2.59
SLC27A1-209ENST00000600297 AEBP1Q8IUX7 1158 aa31.2■■■□□ 2.59
SLC27A1-209ENST00000600297 ATF5Q9Y2D1 282 aaPredicted RBP31.19■■■□□ 2.58
SLC27A1-209ENST00000600297 ZNF827Q17R98 1081 aa31.18■■■□□ 2.58
SLC27A1-209ENST00000600297 PHKG2P15735 406 aa31.17■■■□□ 2.58
SLC27A1-209ENST00000600297 MTFR1LQ9H019 292 aa31.16■■■□□ 2.58
SLC27A1-209ENST00000600297 RALBP1Q15311 655 aa31.15■■■□□ 2.58
SLC27A1-209ENST00000600297 C5P01031 1676 aa31.15■■■□□ 2.58
SLC27A1-209ENST00000600297 TAF1LQ8IZX4 1826 aa31.14■■■□□ 2.58
SLC27A1-209ENST00000600297 HSP90AB1P08238 724 aaKnown RBP31.13■■■□□ 2.57
SLC27A1-209ENST00000600297 KCNQ4P56696 695 aa31.13■■■□□ 2.57
SLC27A1-209ENST00000600297 CCNL1Q9UK58 526 aaPredicted RBP31.13■■■□□ 2.57
SLC27A1-209ENST00000600297 NUDCQ9Y266 331 aa31.13■■■□□ 2.57
SLC27A1-209ENST00000600297 HMOX1P09601 288 aa31.12■■■□□ 2.57
SLC27A1-209ENST00000600297 AKT1S1Q96B36 256 aa31.12■■■□□ 2.57
SLC27A1-209ENST00000600297 U2SURPO15042 1029 aaKnown RBP31.11■■■□□ 2.57
SLC27A1-209ENST00000600297 PTGER2P43116 358 aa31.11■■■□□ 2.57
SLC27A1-209ENST00000600297 ZNF530Q6P9A1 599 aaPredicted RBP31.1■■■□□ 2.57
SLC27A1-209ENST00000600297 MPRIPQ6WCQ1 1025 aa31.09■■■□□ 2.57
SLC27A1-209ENST00000600297 ZNF316A6NFI3 1004 aaPredicted RBP31.08■■■□□ 2.57
SLC27A1-209ENST00000600297 DCAF8L1A6NGE4 600 aa31.08■■■□□ 2.57
SLC27A1-209ENST00000600297 C1orf141Q5JVX7 400 aa31.08■■■□□ 2.57
SLC27A1-209ENST00000600297 DCAF5Q96JK2 942 aa31.08■■■□□ 2.57
SLC27A1-209ENST00000600297 TFCP2L1Q9NZI6 479 aa31.08■■■□□ 2.57
SLC27A1-209ENST00000600297 PALLDQ8WX93 1383 aa31.05■■■□□ 2.56
SLC27A1-209ENST00000600297 COL24A1Q17RW2 1714 aa31.04■■■□□ 2.56
SLC27A1-209ENST00000600297 PNPLA7Q6ZV29 1317 aa31.04■■■□□ 2.56
SLC27A1-209ENST00000600297 ERVV-2B6SEH9 535 aa31.04■■■□□ 2.56
SLC27A1-209ENST00000600297 SLC16A10Q8TF71 515 aa31.03■■■□□ 2.56
SLC27A1-209ENST00000600297 AKAP4Q5JQC9 854 aa31.02■■■□□ 2.56
SLC27A1-209ENST00000600297 SMARCC1Q92922 1105 aaPredicted RBP31.02■■■□□ 2.56
SLC27A1-209ENST00000600297 SGIP1Q9BQI5 828 aa31.02■■■□□ 2.56
SLC27A1-209ENST00000600297 TMOD3Q9NYL9 352 aa31.02■■■□□ 2.56
SLC27A1-209ENST00000600297 HMGB2P26583 209 aaKnown RBP31.01■■■□□ 2.55
SLC27A1-209ENST00000600297 PIGBQ92521 554 aa31.01■■■□□ 2.55
SLC27A1-209ENST00000600297 U2AF1L5P0DN76 240 aaPredicted RBP30.99■■■□□ 2.55
SLC27A1-209ENST00000600297 U2AF1Q01081 240 aaKnown RBP eCLIP30.99■■■□□ 2.55
SLC27A1-209ENST00000600297 ARXQ96QS3 562 aa30.99■■■□□ 2.55
SLC27A1-209ENST00000600297 FHDC1Q9C0D6 1143 aaPredicted RBP30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms