RNA–Protein interactions for RNA: ENST00000600229.5

CRB3-204, Transcript of crumbs 3, cell polarity complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRB3, Length 1,078 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3-204ENST00000600229 PTF1AQ7RTS3 328 aa23.37■■□□□ 1.33
CRB3-204ENST00000600229 CAMKK2Q96RR4 588 aa23.37■■□□□ 1.33
CRB3-204ENST00000600229 EZH2Q15910 746 aaKnown RBP23.36■■□□□ 1.33
CRB3-204ENST00000600229 BCL11BQ9C0K0 894 aaPredicted RBP23.36■■□□□ 1.33
CRB3-204ENST00000600229 BTAF1O14981 1849 aa23.36■■□□□ 1.33
CRB3-204ENST00000600229 RAPGEF4Q8WZA2 1011 aa23.35■■□□□ 1.33
CRB3-204ENST00000600229 EYA1Q99502 592 aa23.35■■□□□ 1.33
CRB3-204ENST00000600229 CC2D1BQ5T0F9 858 aaKnown RBP23.34■■□□□ 1.33
CRB3-204ENST00000600229 ZCRB1Q8TBF4 217 aaKnown RBP23.34■■□□□ 1.33
CRB3-204ENST00000600229 SRCAPQ6ZRS2 3230 aa23.33■■□□□ 1.33
CRB3-204ENST00000600229 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.32
CRB3-204ENST00000600229 TATP17735 454 aaPredicted RBP23.32■■□□□ 1.32
CRB3-204ENST00000600229 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
CRB3-204ENST00000600229 DDX54Q8TDD1 881 aaKnown RBP23.31■■□□□ 1.32
CRB3-204ENST00000600229 PLEKHG2Q9H7P9 1386 aa23.3■■□□□ 1.32
CRB3-204ENST00000600229 KCNQ2O43526 872 aa23.3■■□□□ 1.32
CRB3-204ENST00000600229 TOGARAM1Q9Y4F4 1720 aa23.3■■□□□ 1.32
CRB3-204ENST00000600229 PLSCR1O15162 318 aa23.29■■□□□ 1.32
CRB3-204ENST00000600229 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
CRB3-204ENST00000600229 PCDH11XQ9BZA7 1347 aa23.29■■□□□ 1.32
CRB3-204ENST00000600229 PCDH11YQ9BZA8 1340 aa23.29■■□□□ 1.32
CRB3-204ENST00000600229 COL3A1P02461 1466 aaPredicted RBP23.27■■□□□ 1.32
CRB3-204ENST00000600229 MTHFSP49914 203 aa23.25■■□□□ 1.31
CRB3-204ENST00000600229 CYP27B1O15528 508 aa23.24■■□□□ 1.31
CRB3-204ENST00000600229 IL13P35225 146 aa23.24■■□□□ 1.31
CRB3-204ENST00000600229 KDRP35968 1356 aa23.24■■□□□ 1.31
CRB3-204ENST00000600229 PAPPAQ13219 1627 aa23.22■■□□□ 1.31
CRB3-204ENST00000600229 ITGB4P16144 1822 aa23.22■■□□□ 1.31
CRB3-204ENST00000600229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.22■■□□□ 1.31
CRB3-204ENST00000600229 LY75O60449 1722 aa23.22■■□□□ 1.31
CRB3-204ENST00000600229 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
CRB3-204ENST00000600229 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
CRB3-204ENST00000600229 PROM2Q8N271 834 aa23.2■■□□□ 1.3
CRB3-204ENST00000600229 SPG7Q9UQ90 795 aa23.2■■□□□ 1.3
CRB3-204ENST00000600229 PSDA5PKW4 1024 aaPredicted RBP23.19■■□□□ 1.3
CRB3-204ENST00000600229 ZEB1P37275 1124 aaPredicted RBP23.18■■□□□ 1.3
CRB3-204ENST00000600229 PRIM1P49642 420 aaKnown RBP23.18■■□□□ 1.3
CRB3-204ENST00000600229 LRP5O75197 1615 aa23.18■■□□□ 1.3
CRB3-204ENST00000600229 R3HDM1Q15032 1099 aaKnown RBP23.17■■□□□ 1.3
CRB3-204ENST00000600229 NKX1-1Q15270 411 aaPredicted RBP23.17■■□□□ 1.3
CRB3-204ENST00000600229 TXNRD1Q16881 649 aa23.17■■□□□ 1.3
CRB3-204ENST00000600229 SYTL4Q96C24 671 aaPredicted RBP23.17■■□□□ 1.3
CRB3-204ENST00000600229 SULT6B1Q6IMI4 303 aa23.16■■□□□ 1.3
CRB3-204ENST00000600229 ANO8Q9HCE9 1232 aaPredicted RBP23.16■■□□□ 1.3
CRB3-204ENST00000600229 DIAPH1O60610 1272 aaKnown RBP23.14■■□□□ 1.29
CRB3-204ENST00000600229 PHKG2P15735 406 aa23.14■■□□□ 1.29
CRB3-204ENST00000600229 NBPF14Q5TI25 921 aa23.13■■□□□ 1.29
CRB3-204ENST00000600229 CASZ1Q86V15 1759 aa23.13■■□□□ 1.29
CRB3-204ENST00000600229 PPP2R1AP30153 589 aa23.12■■□□□ 1.29
CRB3-204ENST00000600229 IFNL2Q8IZJ0 200 aa23.12■■□□□ 1.29
CRB3-204ENST00000600229 KDM6AO15550 1401 aaPredicted RBP23.1■■□□□ 1.29
CRB3-204ENST00000600229 AMOTQ4VCS5 1084 aa23.1■■□□□ 1.29
CRB3-204ENST00000600229 PLEKHO1Q53GL0 409 aaPredicted RBP23.1■■□□□ 1.29
CRB3-204ENST00000600229 LRRC4BQ9NT99 713 aa23.09■■□□□ 1.29
CRB3-204ENST00000600229 QSER1Q2KHR3 1735 aa23.08■■□□□ 1.29
CRB3-204ENST00000600229 HMOX1P09601 288 aa23.08■■□□□ 1.29
CRB3-204ENST00000600229 ZNF530Q6P9A1 599 aaPredicted RBP23.08■■□□□ 1.29
CRB3-204ENST00000600229 SCN11AQ9UI33 1791 aa23.08■■□□□ 1.29
CRB3-204ENST00000600229 VIRMAQ69YN4 1812 aaKnown RBP23.08■■□□□ 1.28
CRB3-204ENST00000600229 TUBGCP6Q96RT7 1819 aa23.08■■□□□ 1.28
CRB3-204ENST00000600229 C5P01031 1676 aa23.07■■□□□ 1.28
CRB3-204ENST00000600229 SLC27A3Q5K4L6 730 aa23.07■■□□□ 1.28
CRB3-204ENST00000600229 TAF1LQ8IZX4 1826 aa23.07■■□□□ 1.28
CRB3-204ENST00000600229 PALLDQ8WX93 1383 aa23.06■■□□□ 1.28
CRB3-204ENST00000600229 MPRIPQ6WCQ1 1025 aa23.06■■□□□ 1.28
CRB3-204ENST00000600229 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
CRB3-204ENST00000600229 ADAMTS7Q9UKP4 1686 aa23.06■■□□□ 1.28
CRB3-204ENST00000600229 DDX10Q13206 875 aaKnown RBP23.05■■□□□ 1.28
CRB3-204ENST00000600229 PIGBQ92521 554 aa23.05■■□□□ 1.28
CRB3-204ENST00000600229 HSP90AB1P08238 724 aaKnown RBP23.04■■□□□ 1.28
CRB3-204ENST00000600229 DCAF5Q96JK2 942 aa23.04■■□□□ 1.28
CRB3-204ENST00000600229 U2SURPO15042 1029 aaKnown RBP23.03■■□□□ 1.28
CRB3-204ENST00000600229 SLC15A2Q16348 729 aa23.03■■□□□ 1.28
CRB3-204ENST00000600229 STK32BQ9NY57 414 aa23.03■■□□□ 1.28
CRB3-204ENST00000600229 ZNF827Q17R98 1081 aa23.02■■□□□ 1.28
CRB3-204ENST00000600229 C1orf141Q5JVX7 400 aa23.02■■□□□ 1.28
CRB3-204ENST00000600229 TMOD3Q9NYL9 352 aa23.02■■□□□ 1.28
CRB3-204ENST00000600229 MRC1P22897 1456 aa23.02■■□□□ 1.28
CRB3-204ENST00000600229 KCNQ4P56696 695 aa23.01■■□□□ 1.27
CRB3-204ENST00000600229 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
CRB3-204ENST00000600229 ERVV-2B6SEH9 535 aa23■■□□□ 1.27
CRB3-204ENST00000600229 SMARCC1Q92922 1105 aaPredicted RBP22.99■■□□□ 1.27
CRB3-204ENST00000600229 AKT1S1Q96B36 256 aa22.99■■□□□ 1.27
CRB3-204ENST00000600229 ZNF831Q5JPB2 1677 aa22.99■■□□□ 1.27
CRB3-204ENST00000600229 AKAP4Q5JQC9 854 aa22.98■■□□□ 1.27
CRB3-204ENST00000600229 PDGFDQ9GZP0 370 aaPredicted RBP22.98■■□□□ 1.27
CRB3-204ENST00000600229 C4BP0C0L5 1744 aa22.98■■□□□ 1.27
CRB3-204ENST00000600229 MTHFSDQ2M296 383 aaKnown RBP22.97■■□□□ 1.27
CRB3-204ENST00000600229 RSPH6AQ9H0K4 717 aa22.97■■□□□ 1.27
CRB3-204ENST00000600229 RALBP1Q15311 655 aa22.96■■□□□ 1.27
CRB3-204ENST00000600229 ASAP1Q9ULH1 1129 aa22.96■■□□□ 1.27
CRB3-204ENST00000600229 NUDCQ9Y266 331 aa22.96■■□□□ 1.27
CRB3-204ENST00000600229 CICQ96RK0 1608 aaPredicted RBP22.94■■□□□ 1.26
CRB3-204ENST00000600229 ATG3Q9NT62 314 aa22.94■■□□□ 1.26
CRB3-204ENST00000600229 COL5A3P25940 1745 aaPredicted RBP22.94■■□□□ 1.26
CRB3-204ENST00000600229 PRKAR2BP31323 418 aa22.93■■□□□ 1.26
CRB3-204ENST00000600229 UBR3Q6ZT12 1888 aa22.93■■□□□ 1.26
CRB3-204ENST00000600229 MAP3K5Q99683 1374 aa22.92■■□□□ 1.26
CRB3-204ENST00000600229 SIPA1L3O60292 1781 aaPredicted RBP22.92■■□□□ 1.26
CRB3-204ENST00000600229 LOC102724428A0A0B4J2F2 783 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms