RNA–Protein interactions for RNA: ENST00000599814.5

SYMPK-214, Transcript of symplekin, humanhuman

TSL 2 BASIC

Gene SYMPK, Length 6,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-214ENST00000599814 ZNF76P36508 570 aa15.41■□□□□ 0.06
SYMPK-214ENST00000599814 GNAI1P63096 354 aa15.41■□□□□ 0.06
SYMPK-214ENST00000599814 PRKRIP1Q9H875 184 aaPredicted RBP15.41■□□□□ 0.06
SYMPK-214ENST00000599814 RBM10P98175 930 aaKnown RBP15.4■□□□□ 0.06
SYMPK-214ENST00000599814 CAVIN1Q6NZI2 390 aaKnown RBP15.4■□□□□ 0.06
SYMPK-214ENST00000599814 ANKRD18AQ8IVF6 992 aa15.4■□□□□ 0.06
SYMPK-214ENST00000599814 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
SYMPK-214ENST00000599814 HDAC9Q9UKV0 1011 aa15.4■□□□□ 0.06
SYMPK-214ENST00000599814 ADGRL1O94910 1474 aa15.4■□□□□ 0.06
SYMPK-214ENST00000599814 APAF1O14727 1248 aa15.4■□□□□ 0.06
SYMPK-214ENST00000599814 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
SYMPK-214ENST00000599814 NBPF6Q5VWK0 638 aa15.39■□□□□ 0.05
SYMPK-214ENST00000599814 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
SYMPK-214ENST00000599814 NBPF4Q96M43 638 aa15.39■□□□□ 0.05
SYMPK-214ENST00000599814 NPHP3Q7Z494 1330 aa15.39■□□□□ 0.05
SYMPK-214ENST00000599814 PIP4K2AP48426 406 aaPredicted RBP15.39■□□□□ 0.05
SYMPK-214ENST00000599814 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
SYMPK-214ENST00000599814 CNTROBQ8N137 903 aa15.39■□□□□ 0.05
SYMPK-214ENST00000599814 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.39■□□□□ 0.057e-7■■■■□ 20.2
SYMPK-214ENST00000599814 TNRQ92752 1358 aa15.38■□□□□ 0.05
SYMPK-214ENST00000599814 KINO60870 393 aaKnown RBP15.38■□□□□ 0.05
SYMPK-214ENST00000599814 SIL1Q9H173 461 aa15.38■□□□□ 0.05
SYMPK-214ENST00000599814 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
SYMPK-214ENST00000599814 EP400NLQ6ZTU2 488 aa15.38■□□□□ 0.05
SYMPK-214ENST00000599814 PNISRQ8TF01 805 aaKnown RBP15.38■□□□□ 0.05
SYMPK-214ENST00000599814 ABCF2Q9UG63 623 aa15.38■□□□□ 0.05
SYMPK-214ENST00000599814 NEFHP12036 1026 aa15.38■□□□□ 0.05
SYMPK-214ENST00000599814 USP5P45974 858 aa15.38■□□□□ 0.05
SYMPK-214ENST00000599814 ZNF772Q68DY9 489 aaPredicted RBP15.38■□□□□ 0.05
SYMPK-214ENST00000599814 DRC1Q96MC2 740 aa15.38■□□□□ 0.05
SYMPK-214ENST00000599814 EIF3JO75822 258 aaKnown RBP15.37■□□□□ 0.05
SYMPK-214ENST00000599814 USP8P40818 1118 aa15.37■□□□□ 0.05
SYMPK-214ENST00000599814 SEPT7Q16181 437 aaKnown RBP15.37■□□□□ 0.05
SYMPK-214ENST00000599814 HDGFL1Q5TGJ6 251 aa15.37■□□□□ 0.05
SYMPK-214ENST00000599814 UHRF1BP1Q6BDS2 1440 aa15.37■□□□□ 0.05
SYMPK-214ENST00000599814 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
SYMPK-214ENST00000599814 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
SYMPK-214ENST00000599814 OGFOD1Q8N543 542 aa15.37■□□□□ 0.05
SYMPK-214ENST00000599814 ZNF396Q96N95 335 aaPredicted RBP15.37■□□□□ 0.05
SYMPK-214ENST00000599814 RABEP1Q15276 862 aa15.37■□□□□ 0.05
SYMPK-214ENST00000599814 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
SYMPK-214ENST00000599814 ERBINQ96RT1 1412 aa15.37■□□□□ 0.05
SYMPK-214ENST00000599814 TOPBP1Q92547 1522 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 A0A087WZG4 1122 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 ANKRD50Q9ULJ7 1429 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 ERLIN1O75477 346 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 TXLNAP40222 546 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 ARHGAP27Q6ZUM4 889 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 DZIP1Q86YF9 867 aaKnown RBP15.36■□□□□ 0.05
SYMPK-214ENST00000599814 CABLES1Q8TDN4 633 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 TXLNBQ8N3L3 684 aa15.36■□□□□ 0.05
SYMPK-214ENST00000599814 FAM98CQ17RN3 349 aaKnown RBP15.35■□□□□ 0.05
SYMPK-214ENST00000599814 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
SYMPK-214ENST00000599814 USP47Q96K76 1375 aa15.35■□□□□ 0.05
SYMPK-214ENST00000599814 ENOX2Q16206 610 aaKnown RBP15.35■□□□□ 0.05
SYMPK-214ENST00000599814 NUP133Q8WUM0 1156 aa15.35■□□□□ 0.05
SYMPK-214ENST00000599814 ZNHIT6Q9NWK9 470 aaKnown RBP15.35■□□□□ 0.05
SYMPK-214ENST00000599814 CCDC69A6NI79 296 aa15.35■□□□□ 0.05
SYMPK-214ENST00000599814 GPTP24298 496 aa15.35■□□□□ 0.05
SYMPK-214ENST00000599814 MCM2P49736 904 aa15.35■□□□□ 0.05
SYMPK-214ENST00000599814 PIBF1Q8WXW3 757 aa15.35■□□□□ 0.05
SYMPK-214ENST00000599814 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
SYMPK-214ENST00000599814 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
SYMPK-214ENST00000599814 TRIM21P19474 475 aaKnown RBP15.34■□□□□ 0.05
SYMPK-214ENST00000599814 ERC1Q8IUD2 1116 aa15.34■□□□□ 0.05
SYMPK-214ENST00000599814 CCDC181Q5TID7 509 aa15.34■□□□□ 0.05
SYMPK-214ENST00000599814 SPC24Q8NBT2 197 aa15.34■□□□□ 0.05
SYMPK-214ENST00000599814 PRPF40AO75400 957 aaKnown RBP15.34■□□□□ 0.05
SYMPK-214ENST00000599814 QTRT2Q9H974 415 aaKnown RBP15.34■□□□□ 0.05
SYMPK-214ENST00000599814 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
SYMPK-214ENST00000599814 DACH1Q9UI36 760 aa15.34■□□□□ 0.05
SYMPK-214ENST00000599814 TAF3Q5VWG9 929 aa15.33■□□□□ 0.05
SYMPK-214ENST00000599814 BCS1LQ9Y276 419 aa15.33■□□□□ 0.05
SYMPK-214ENST00000599814 BRPF1P55201 1214 aaPredicted RBP15.33■□□□□ 0.04
SYMPK-214ENST00000599814 UQCRHLA0A096LP55 91 aa15.33■□□□□ 0.04
SYMPK-214ENST00000599814 ANKRD62A6NC57 917 aa15.33■□□□□ 0.04
SYMPK-214ENST00000599814 UQCRHP07919 91 aa15.33■□□□□ 0.04
SYMPK-214ENST00000599814 CCDC112Q8NEF3 446 aa15.33■□□□□ 0.04
SYMPK-214ENST00000599814 RTCBQ9Y3I0 505 aaKnown RBP15.33■□□□□ 0.04
SYMPK-214ENST00000599814 LUC7LQ9NQ29 371 aaKnown RBP15.33■□□□□ 0.04
SYMPK-214ENST00000599814 NACAP1Q9BZK3 213 aa15.33■□□□□ 0.04
SYMPK-214ENST00000599814 TTC16Q8NEE8 873 aa15.32■□□□□ 0.04
SYMPK-214ENST00000599814 FKBP4Q02790 459 aaKnown RBP eCLIP15.32■□□□□ 0.04
SYMPK-214ENST00000599814 SERPINC1P01008 464 aa15.32■□□□□ 0.04
SYMPK-214ENST00000599814 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
SYMPK-214ENST00000599814 SURF6O75683 361 aaKnown RBP15.32■□□□□ 0.04
SYMPK-214ENST00000599814 IQCEQ6IPM2 695 aa15.32■□□□□ 0.04
SYMPK-214ENST00000599814 PPFIBP1Q86W92 1011 aa15.32■□□□□ 0.04
SYMPK-214ENST00000599814 PDCP20941 246 aa15.31■□□□□ 0.04
SYMPK-214ENST00000599814 BRPF3Q9ULD4 1205 aa15.31■□□□□ 0.04
SYMPK-214ENST00000599814 PLB1Q6P1J6 1458 aa15.31■□□□□ 0.04
SYMPK-214ENST00000599814 SMARCC1Q92922 1105 aaPredicted RBP15.31■□□□□ 0.04
SYMPK-214ENST00000599814 SEPT11Q9NVA2 429 aaKnown RBP15.31■□□□□ 0.04
SYMPK-214ENST00000599814 BTG4Q9NY30 223 aa15.31■□□□□ 0.04
SYMPK-214ENST00000599814 HIP1O00291 1037 aa15.31■□□□□ 0.04
SYMPK-214ENST00000599814 DPY19L2Q6NUT2 758 aa15.31■□□□□ 0.04
SYMPK-214ENST00000599814 F8W031 263 aaPredicted RBP15.31■□□□□ 0.04
SYMPK-214ENST00000599814 CCDC192P0DO97 292 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms