RNA–Protein interactions for RNA: ENST00000599362.5

SNRPA-206, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-206ENST00000599362 CASZ1Q86V15 1759 aa25.73■■□□□ 1.71
SNRPA-206ENST00000599362 ANKRD26Q9UPS8 1709 aa25.73■■□□□ 1.71
SNRPA-206ENST00000599362 USHBP1Q8N6Y0 703 aa25.72■■□□□ 1.71
SNRPA-206ENST00000599362 KAT6BQ8WYB5 2073 aa25.72■■□□□ 1.71
SNRPA-206ENST00000599362 SLC15A2Q16348 729 aa25.71■■□□□ 1.71
SNRPA-206ENST00000599362 RAPGEF4Q8WZA2 1011 aa25.7■■□□□ 1.7
SNRPA-206ENST00000599362 STK32BQ9NY57 414 aa25.7■■□□□ 1.7
SNRPA-206ENST00000599362 PAPPAQ13219 1627 aa25.7■■□□□ 1.7
SNRPA-206ENST00000599362 NCAPD2Q15021 1401 aa25.69■■□□□ 1.7
SNRPA-206ENST00000599362 WASHC2AQ641Q2 1341 aa25.68■■□□□ 1.7
SNRPA-206ENST00000599362 TATP17735 454 aaPredicted RBP25.68■■□□□ 1.7
SNRPA-206ENST00000599362 PDGFDQ9GZP0 370 aaPredicted RBP25.68■■□□□ 1.7
SNRPA-206ENST00000599362 PRIM1P49642 420 aaKnown RBP25.67■■□□□ 1.7
SNRPA-206ENST00000599362 PANK3Q9H999 370 aa25.67■■□□□ 1.7
SNRPA-206ENST00000599362 POLKQ9UBT6 870 aa25.67■■□□□ 1.7
SNRPA-206ENST00000599362 NSD2O96028 1365 aa25.67■■□□□ 1.7
SNRPA-206ENST00000599362 DOT1LQ8TEK3 1739 aa25.66■■□□□ 1.7
SNRPA-206ENST00000599362 MAP2P11137 1827 aaKnown RBP25.66■■□□□ 1.7
SNRPA-206ENST00000599362 LRRC4BQ9NT99 713 aa25.66■■□□□ 1.7
SNRPA-206ENST00000599362 PPM1GO15355 546 aaPredicted RBP25.64■■□□□ 1.7
SNRPA-206ENST00000599362 SLC27A3Q5K4L6 730 aa25.64■■□□□ 1.7
SNRPA-206ENST00000599362 PCDH11XQ9BZA7 1347 aa25.63■■□□□ 1.69
SNRPA-206ENST00000599362 PCDH11YQ9BZA8 1340 aa25.63■■□□□ 1.69
SNRPA-206ENST00000599362 SYTL4Q96C24 671 aaPredicted RBP25.62■■□□□ 1.69
SNRPA-206ENST00000599362 EYA1Q99502 592 aa25.6■■□□□ 1.69
SNRPA-206ENST00000599362 ZBTB7AO95365 584 aa25.59■■□□□ 1.69
SNRPA-206ENST00000599362 ZNF827Q17R98 1081 aa25.59■■□□□ 1.69
SNRPA-206ENST00000599362 PPP1R1BQ9UD71 204 aaPredicted RBP25.59■■□□□ 1.69
SNRPA-206ENST00000599362 LY75O60449 1722 aa25.59■■□□□ 1.69
SNRPA-206ENST00000599362 PKD1L3Q7Z443 1732 aa25.59■■□□□ 1.69
SNRPA-206ENST00000599362 CYP27B1O15528 508 aa25.58■■□□□ 1.69
SNRPA-206ENST00000599362 PTGER2P43116 358 aa25.58■■□□□ 1.69
SNRPA-206ENST00000599362 AKT1S1Q96B36 256 aa25.58■■□□□ 1.69
SNRPA-206ENST00000599362 TNNT2P45379 298 aaPredicted RBP25.57■■□□□ 1.68
SNRPA-206ENST00000599362 MTFR1LQ9H019 292 aa25.56■■□□□ 1.68
SNRPA-206ENST00000599362 EIF4A2Q14240 407 aaKnown RBP25.55■■□□□ 1.68
SNRPA-206ENST00000599362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.54■■□□□ 1.68
SNRPA-206ENST00000599362 ATF5Q9Y2D1 282 aaPredicted RBP25.54■■□□□ 1.68
SNRPA-206ENST00000599362 NKX1-1Q15270 411 aaPredicted RBP25.53■■□□□ 1.68
SNRPA-206ENST00000599362 SGIP1Q9BQI5 828 aa25.53■■□□□ 1.68
SNRPA-206ENST00000599362 QSER1Q2KHR3 1735 aa25.52■■□□□ 1.68
SNRPA-206ENST00000599362 KCNQ4P56696 695 aa25.52■■□□□ 1.68
SNRPA-206ENST00000599362 SPG7Q9UQ90 795 aa25.52■■□□□ 1.68
SNRPA-206ENST00000599362 KIF7Q2M1P5 1343 aa25.52■■□□□ 1.68
SNRPA-206ENST00000599362 PLEKHG2Q9H7P9 1386 aa25.52■■□□□ 1.68
SNRPA-206ENST00000599362 MORC1Q86VD1 984 aa25.5■■□□□ 1.67
SNRPA-206ENST00000599362 CCNL1Q9UK58 526 aaPredicted RBP25.5■■□□□ 1.67
SNRPA-206ENST00000599362 KNSTRNQ9Y448 316 aa25.5■■□□□ 1.67
SNRPA-206ENST00000599362 TOGARAM1Q9Y4F4 1720 aa25.5■■□□□ 1.67
SNRPA-206ENST00000599362 IGSF1Q8N6C5 1336 aa25.49■■□□□ 1.67
SNRPA-206ENST00000599362 PNPLA7Q6ZV29 1317 aa25.48■■□□□ 1.67
SNRPA-206ENST00000599362 AMER1Q5JTC6 1135 aaPredicted RBP25.47■■□□□ 1.67
SNRPA-206ENST00000599362 MPRIPQ6WCQ1 1025 aa25.47■■□□□ 1.67
SNRPA-206ENST00000599362 SLC16A10Q8TF71 515 aa25.47■■□□□ 1.67
SNRPA-206ENST00000599362 ITGB4P16144 1822 aa25.47■■□□□ 1.67
SNRPA-206ENST00000599362 TUBGCP6Q96RT7 1819 aa25.46■■□□□ 1.67
SNRPA-206ENST00000599362 PALLDQ8WX93 1383 aa25.45■■□□□ 1.67
SNRPA-206ENST00000599362 TFCP2L1Q9NZI6 479 aa25.45■■□□□ 1.66
SNRPA-206ENST00000599362 PHKG2P15735 406 aa25.44■■□□□ 1.66
SNRPA-206ENST00000599362 IFNL2Q8IZJ0 200 aa25.44■■□□□ 1.66
SNRPA-206ENST00000599362 PIGBQ92521 554 aa25.44■■□□□ 1.66
SNRPA-206ENST00000599362 SMARCC1Q92922 1105 aaPredicted RBP25.43■■□□□ 1.66
SNRPA-206ENST00000599362 COL24A1Q17RW2 1714 aa25.43■■□□□ 1.66
SNRPA-206ENST00000599362 PER1O15534 1290 aaPredicted RBP25.42■■□□□ 1.66
SNRPA-206ENST00000599362 HMGB2P26583 209 aaKnown RBP25.42■■□□□ 1.66
SNRPA-206ENST00000599362 ARXQ96QS3 562 aa25.41■■□□□ 1.66
SNRPA-206ENST00000599362 SYT17Q9BSW7 474 aa25.41■■□□□ 1.66
SNRPA-206ENST00000599362 FHDC1Q9C0D6 1143 aaPredicted RBP25.41■■□□□ 1.66
SNRPA-206ENST00000599362 C5P01031 1676 aa25.4■■□□□ 1.66
SNRPA-206ENST00000599362 MAP3K5Q99683 1374 aa25.39■■□□□ 1.65
SNRPA-206ENST00000599362 TAF1LQ8IZX4 1826 aa25.38■■□□□ 1.65
SNRPA-206ENST00000599362 DCAF8L1A6NGE4 600 aa25.36■■□□□ 1.65
SNRPA-206ENST00000599362 IL13P35225 146 aa25.36■■□□□ 1.65
SNRPA-206ENST00000599362 COL23A1Q86Y22 540 aaPredicted RBP25.36■■□□□ 1.65
SNRPA-206ENST00000599362 TMOD3Q9NYL9 352 aa25.36■■□□□ 1.65
SNRPA-206ENST00000599362 AMOTQ4VCS5 1084 aa25.35■■□□□ 1.65
SNRPA-206ENST00000599362 PLEKHO1Q53GL0 409 aaPredicted RBP25.35■■□□□ 1.65
SNRPA-206ENST00000599362 KDRP35968 1356 aa25.34■■□□□ 1.65
SNRPA-206ENST00000599362 AEBP1Q8IUX7 1158 aa25.34■■□□□ 1.65
SNRPA-206ENST00000599362 HSP90AB1P08238 724 aaKnown RBP25.33■■□□□ 1.65
SNRPA-206ENST00000599362 POLD1P28340 1107 aa25.33■■□□□ 1.65
SNRPA-206ENST00000599362 NPC1L1Q9UHC9 1359 aa25.32■■□□□ 1.64
SNRPA-206ENST00000599362 C4BP0C0L5 1744 aa25.32■■□□□ 1.64
SNRPA-206ENST00000599362 LOC102724428A0A0B4J2F2 783 aa25.32■■□□□ 1.64
SNRPA-206ENST00000599362 ERVV-2B6SEH9 535 aa25.32■■□□□ 1.64
SNRPA-206ENST00000599362 SIK1P57059 783 aa25.32■■□□□ 1.64
SNRPA-206ENST00000599362 DCAF5Q96JK2 942 aa25.32■■□□□ 1.64
SNRPA-206ENST00000599362 ASAP1Q9ULH1 1129 aa25.32■■□□□ 1.64
SNRPA-206ENST00000599362 MTHFSP49914 203 aa25.31■■□□□ 1.64
SNRPA-206ENST00000599362 SULT6B1Q6IMI4 303 aa25.31■■□□□ 1.64
SNRPA-206ENST00000599362 FLAD1Q8NFF5 587 aa25.31■■□□□ 1.64
SNRPA-206ENST00000599362 ZNF530Q6P9A1 599 aaPredicted RBP25.3■■□□□ 1.64
SNRPA-206ENST00000599362 ATG3Q9NT62 314 aa25.3■■□□□ 1.64
SNRPA-206ENST00000599362 KDM6AO15550 1401 aaPredicted RBP25.29■■□□□ 1.64
SNRPA-206ENST00000599362 MSH5O43196 834 aa25.28■■□□□ 1.64
SNRPA-206ENST00000599362 CC2D1BQ5T0F9 858 aaKnown RBP25.28■■□□□ 1.64
SNRPA-206ENST00000599362 YY1P25490 414 aa25.27■■□□□ 1.64
SNRPA-206ENST00000599362 LINC00116Q8NCU8 138 aa25.27■■□□□ 1.64
SNRPA-206ENST00000599362 AK7Q96M32 723 aa25.27■■□□□ 1.64
SNRPA-206ENST00000599362 ITPK1Q13572 414 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms